Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0553 Ceratophyllum demersum HOM05D000142 ORTHO05D003173 5.7e-43 177.2 89 100.0
MBI04_g33879_MAGBIO Magnolia biondii HOM05D000142 ORTHO05D003173 4.0e-12 74.7 148 34.5
CiPaw.11G094600 Carya illinoinensis HOM05D000142 ORTHO05D003173 1.5e-11 72.8 152 33.6
CiPaw.12G064600 Carya illinoinensis HOM05D000142 ORTHO05D003173 2.0e-11 72.4 148 33.8
CDE11G0914 Ceratophyllum demersum HOM05D000086 ORTHO05D000431 2.6e-11 72.0 38 89.5
Dinv28967 Davidia involucrata HOM05D000142 ORTHO05D003173 3.4e-11 71.6 157 35.7
Oeu006239.1 Olea europaea HOM05D000142 ORTHO05D003173 4.4e-11 71.2 153 32.7
PGR031G1255 Punica granatum HOM05D000142 ORTHO05D003173 5.7e-11 70.9 158 32.9
Aqoxy3G02321 Aquilegia oxysepala HOM05D000142 ORTHO05D003173 7.5e-11 70.5 155 33.5
CDE11G0422 Ceratophyllum demersum HOM05D000142 ORTHO05D003173 7.5e-11 70.5 38 86.8
TAR375G0415 Trochodendron aralioides HOM05D000142 ORTHO05D003173 7.5e-11 70.5 157 33.8
Cc08_g02910 Coffea canephora HOM05D000142 ORTHO05D003173 9.8e-11 70.1 156 33.3
Nn6g33572 Nelumbo nucifera HOM05D000142 ORTHO05D003173 9.8e-11 70.1 150 32.7
Nitab4.5_0006453g0020 Nicotiana tabacum HOM05D000142 ORTHO05D003173 9.8e-11 70.1 154 32.5
CDE06G0116 Ceratophyllum demersum HOM05D000142 ORTHO05D003173 2.8e-10 68.6 149 32.9
Haze_08213 Corylus avellana HOM05D000142 ORTHO05D003173 2.8e-10 68.6 148 33.1
Manes.17G010200 Manihot esculenta HOM05D000142 ORTHO05D003173 2.8e-10 68.6 151 31.8
Sed0026800 Sechium edule HOM05D000142 ORTHO05D003173 2.8e-10 68.6 150 33.3
CsaV3_3G001570 Cucumis sativus L. HOM05D000142 ORTHO05D003173 6.3e-10 67.4 152 30.3
Prupe.5G034000 Prunus persica HOM05D000142 ORTHO05D003173 6.3e-10 67.4 157 31.8
Cfa012454 Carpinus fangiana HOM05D000142 ORTHO05D003173 8.3e-10 67.0 148 32.4
ATR0665G230 Amborella trichopoda HOM05D000142 ORTHO05D003173 1.1e-09 66.6 145 31.7
Glyma.01G017400 Glycine max HOM05D000142 ORTHO05D003173 1.1e-09 66.6 158 30.4
Glyma.09G205500 Glycine max HOM05D000142 ORTHO05D003173 1.1e-09 66.6 158 29.7
Sc01g0007390 Simmondsia chinensis HOM05D000142 ORTHO05D003173 1.1e-09 66.6 152 30.9
Ciclev10012439m.g Citrus clementina HOM05D000142 ORTHO05D003173 1.4e-09 66.2 41 75.6
Hma1.2p1_0574F.1_g181540 Hydrangea macrophylla HOM05D000142 ORTHO05D003173 1.4e-09 66.2 158 31.6
Hund11230 Selenicereus undatus HOM05D000142 ORTHO05D003173 1.4e-09 66.2 150 32.0
EL10Ac5g12093 Beta vulgaris HOM05D000142 ORTHO05D003173 1.8e-09 65.9 163 28.2
HPP92_022110 Vanilla planifolia HOM05D000142 ORTHO05D003173 1.8e-09 65.9 153 29.4
PSO782G4960 Papaver somniferum HOM05D000142 ORTHO05D003173 2.4e-09 65.5 150 31.3
MSTRG.12165 Avicennia marina HOM05D000142 ORTHO05D003173 3.1e-09 65.1 41 75.6
MELO3C013843.2 Cucumis melo HOM05D000142 ORTHO05D003173 3.1e-09 65.1 152 29.6
Eucgr.D02207 Eucalyptus grandis HOM05D000142 ORTHO05D003173 3.1e-09 65.1 159 30.2
PSO063G1565 Papaver somniferum HOM05D000142 ORTHO05D003173 3.1e-09 65.1 150 31.3
THA.LOC104812753 Tarenaya hassleriana HOM05D000142 ORTHO05D003173 4.1e-09 64.7 159 30.8
PGSC0003DMG400017519 Solanum tuberosum HOM05D000142 ORTHO05D003173 5.4e-09 64.3 154 29.2
Actinidia25971 Actinidia chinensis HOM05D000142 ORTHO05D003173 7.0e-09 63.9 135 32.6
Aa31LG9G15420 Aethionema arabicum HOM05D000142 ORTHO05D003173 9.2e-09 63.5 158 29.7
CANSAT21G2381 Cannabis sativa HOM05D000142 ORTHO05D003173 9.2e-09 63.5 149 28.2
MD06G1035700 Malus domestica HOM05D000142 ORTHO05D003173 9.2e-09 63.5 157 31.2
Thhalv10016986m.g Eutrema salsugineum HOM05D000142 ORTHO05D003173 1.6e-08 62.8 161 29.8
FAN08G1774 Fragaria x ananassa HOM05D000142 ORTHO05D003173 1.6e-08 62.8 157 30.6
Gohir.D11G029700 Gossypium hirsutum HOM05D000142 ORTHO05D003173 1.6e-08 62.8 157 31.2
Solyc08g076840.3 Solanum lycopersicum HOM05D000142 ORTHO05D003173 1.6e-08 62.8 154 28.6
Sopen08g025360 Solanum pennellii HOM05D000142 ORTHO05D003173 1.6e-08 62.8 154 28.6
CARHR129560 Cardamine hirsuta HOM05D000142 ORTHO05D003173 2.0e-08 62.4 160 28.8
FAN13G0205 Fragaria x ananassa HOM05D000142 ORTHO05D003173 2.0e-08 62.4 157 31.8
Potri.001G141300 Populus trichocarpa HOM05D000142 ORTHO05D003173 2.0e-08 62.4 161 31.1
Atru.chr6.1677 Acer truncatum HOM05D000142 ORTHO05D003173 2.7e-08 62.0 41 70.7
Gohir.A11G031000 Gossypium hirsutum HOM05D000142 ORTHO05D003173 2.7e-08 62.0 157 31.2
Gorai.007G032500 Gossypium raimondii HOM05D000142 ORTHO05D003173 2.7e-08 62.0 157 31.2
SGA_v2.0_scaffold36G14309 Striga asiatica HOM05D000142 ORTHO05D003173 2.7e-08 62.0 150 32.0
AL4G31450 Arabidopsis lyrata HOM05D000142 ORTHO05D003173 3.5e-08 61.6 160 28.1
BolC4t27916H Brassica oleracea HOM05D000142 ORTHO05D003173 3.5e-08 61.6 159 28.9
CDE12G0233 Ceratophyllum demersum HOM05D000142 ORTHO05D003173 3.5e-08 61.6 144 31.2
RcHm_v2.0_Chr7g0210041 Rosa chinensis HOM05D000142 ORTHO05D003173 3.5e-08 61.6 150 31.3
BcaB06g28841 Brassica carinata HOM05D000142 ORTHO05D003173 4.5e-08 61.2 160 28.8
AUR62007302 Chenopodium quinoa HOM05D000142 ORTHO05D003173 4.5e-08 61.2 159 27.7
Os04g0591000 Oryza sativa ssp. japonica HOM05D000142 ORTHO05D003173 4.5e-08 61.2 150 30.0
Sp4g17630 Schrenkiella parvula HOM05D000142 ORTHO05D003173 4.5e-08 61.2 160 28.8
TAR374G1376 Trochodendron aralioides HOM05D000142 ORTHO05D003173 4.5e-08 61.2 149 30.2
Ca_25202_v3 Cicer arietinum L. HOM05D000142 ORTHO05D003173 5.9e-08 60.8 151 29.8
Thecc.03G225700 Theobroma cacao HOM05D000142 ORTHO05D003173 5.9e-08 60.8 156 30.1
AT2G35410 Arabidopsis thaliana HOM05D000142 ORTHO05D003173 7.8e-08 60.5 160 28.1
BcaC02g07715 Brassica carinata HOM05D000142 ORTHO05D003173 7.8e-08 60.5 159 28.9
Lj2C237G7 Lonicera japonica HOM05D000142 ORTHO05D003173 7.8e-08 60.5 41 68.3
A04p26900 Brassica napus HOM05D000142 ORTHO05D003173 1.0e-07 60.1 159 28.3
C04p64290 Brassica napus HOM05D000142 ORTHO05D003173 1.0e-07 60.1 159 28.3
Carub.0004s1709 Capsella rubella HOM05D000142 ORTHO05D003173 1.0e-07 60.1 151 29.8
DCAR_008256 Daucus carota HOM05D000142 ORTHO05D003173 1.0e-07 60.1 40 67.5
Hma1.2p1_0303F.1_g119000 Hydrangea macrophylla HOM05D000142 ORTHO05D003173 1.0e-07 60.1 48 60.4
Ah.07g200540 Amaranthus hybridus HOM05D000142 ORTHO05D003173 1.3e-07 59.7 44 61.4
BraA04t18189Z Brassica rapa HOM05D000142 ORTHO05D003173 1.3e-07 59.7 159 28.3
Phvul.002G140400 Phaseolus vulgaris HOM05D000142 ORTHO05D003173 1.3e-07 59.7 48 60.4
AUR62018703 Chenopodium quinoa HOM05D000142 ORTHO05D003173 1.7e-07 59.3 49 57.1
Gohir.A03G000053 Gossypium hirsutum HOM05D000142 ORTHO05D003173 1.7e-07 59.3 153 28.8
DCAR_004294 Daucus carota HOM05D000142 ORTHO05D003173 2.3e-07 58.9 151 29.1
Peaxi162Scf00236g00215 Petunia axillaris HOM05D000142 ORTHO05D003173 2.3e-07 58.9 43 65.1
Psat2g137080 Pisum sativum HOM05D000142 ORTHO05D003173 2.3e-07 58.9 158 27.2
TWI81G0579 Tripterygium wilfordii HOM05D000142 ORTHO05D003173 2.3e-07 58.9 150 29.3
arahy.Tifrunner.gnm1.ann1.DB3C02 Arachis hypogaea HOM05D000142 ORTHO05D003173 2.9e-07 58.5 43 65.1
arahy.Tifrunner.gnm1.ann1.NEF90H Arachis hypogaea HOM05D000142 ORTHO05D003173 2.9e-07 58.5 43 65.1
COL.COLO4_17006 Corchorus olitorius HOM05D000142 ORTHO05D003173 2.9e-07 58.5 156 29.5
arahy.Tifrunner.gnm1.ann1.60H2PX Arachis hypogaea HOM05D000142 ORTHO05D003173 5.0e-07 57.8 40 67.5
arahy.Tifrunner.gnm1.ann1.ECYT9B Arachis hypogaea HOM05D000142 ORTHO05D003173 5.0e-07 57.8 40 67.5
Duzib068G0809 Durio zibethinus HOM05D000142 ORTHO05D003173 5.0e-07 57.8 149 27.5
Duzib068G0998 Durio zibethinus HOM05D000142 ORTHO05D003173 5.0e-07 57.8 157 28.0
Gorai.003G183300 Gossypium raimondii HOM05D000142 ORTHO05D003173 5.0e-07 57.8 153 28.1
HPP92_020965 Vanilla planifolia HOM05D000142 ORTHO05D003173 5.0e-07 57.8 39 66.7
VMungo1215G2702 Vigna mungo HOM05D000142 ORTHO05D003173 5.0e-07 57.8 40 67.5
GSVIVG01013146001 Vitis vinifera HOM05D000142 ORTHO05D003173 5.0e-07 57.8 160 29.4
HanXRQChr13g0395131 Helianthus annuus HOM05D000142 ORTHO05D003173 6.6e-07 57.4 154 31.8
Rhsim11G0016500 Rhododendron simsii HOM05D000142 ORTHO05D003173 6.6e-07 57.4 144 30.6
FAN18G2486 Fragaria x ananassa HOM05D000142 ORTHO05D003173 8.6e-07 57.0 157 29.9
Gohir.D03G172600 Gossypium hirsutum HOM05D000142 ORTHO05D003173 1.1e-06 56.6 43 60.5
Migut.A01012 Erythranthe guttata HOM05D000142 ORTHO05D003173 2.5e-06 55.5 157 28.7
Lj2g0016522 Lotus japonicus HOM05D000142 ORTHO05D003173 2.5e-06 55.5 150 27.3
TPR.G31941 Trifolium pratense HOM05D000142 ORTHO05D003173 2.5e-06 55.5 40 57.5
Actinidia03366 Actinidia chinensis HOM05D000142 ORTHO05D003173 4.3e-06 54.7 41 61.0
Medtr5g030020 Medicago truncatula HOM05D000142 ORTHO05D003173 4.3e-06 54.7 149 25.5
TWI60G0791 Tripterygium wilfordii HOM05D000142 ORTHO05D003173 4.3e-06 54.7 150 28.0
CSS0014445 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D003173 5.6e-06 54.3 151 29.1
CSS0015928 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D003173 5.6e-06 54.3 151 29.1
Lsat_1_v5_gn_6_4121 Lactuca sativa HOM05D000142 ORTHO05D003173 5.6e-06 54.3 43 60.5
MBI06_g03315_MAGBIO Magnolia biondii HOM05D000142 ORTHO05D003173 5.6e-06 54.3 47 61.7
Aa31LG9G14720 Aethionema arabicum HOM05D000142 ORTHO05D003173 7.3e-06 53.9 52 51.9
Sc10g0005170 Simmondsia chinensis HOM05D000142 ORTHO05D003173 7.3e-06 53.9 45 55.6


User provided reference genes

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