Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0288 Ceratophyllum demersum HOM05D003457 ORTHO05D009746 8.3e-97 357.1 185 100.0
MBI04_g27236_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009746 1.6e-15 87.0 150 41.3
AT5G54180 Arabidopsis thaliana HOM05D003457 ORTHO05D009746 1.4e-14 84.0 175 33.7
Aqoxy4G02698 Aquilegia oxysepala HOM05D003457 ORTHO05D009746 5.2e-14 82.0 161 31.7
AL8G29400 Arabidopsis lyrata HOM05D003457 ORTHO05D009746 4.4e-13 79.0 175 33.1
Cpa.g.sc3.154 Carica papaya HOM05D003457 ORTHO05D009746 5.7e-13 78.6 122 37.7
CiPaw.06G041300 Carya illinoinensis HOM05D003457 ORTHO05D009746 7.5e-13 78.2 123 37.4
QL09p007206 Quercus lobata HOM05D003457 ORTHO05D009746 7.5e-13 78.2 129 36.4
Thhalv10013278m.g Eutrema salsugineum HOM05D003457 ORTHO05D009746 1.3e-12 77.4 180 31.7
Thecc.03G208500 Theobroma cacao HOM05D003457 ORTHO05D009746 1.3e-12 77.4 107 41.1
CARHR267390 Cardamine hirsuta HOM05D003457 ORTHO05D009746 1.7e-12 77.0 123 37.4
Haze_00295 Corylus avellana HOM05D003457 ORTHO05D009746 2.8e-12 76.3 114 39.5
BraA10t43244Z Brassica rapa HOM05D003457 ORTHO05D009746 3.7e-12 75.9 176 30.7
Sc13g0010270 Simmondsia chinensis HOM05D003457 ORTHO05D009746 3.7e-12 75.9 101 38.6
Cfa016161 Carpinus fangiana HOM05D003457 ORTHO05D009746 4.8e-12 75.5 106 40.6
BolC9t57320H Brassica oleracea HOM05D003457 ORTHO05D009746 1.1e-11 74.3 180 31.1
Carub.0008s1449 Capsella rubella HOM05D003457 ORTHO05D009746 1.1e-11 74.3 175 30.9
Eucgr.K00434 Eucalyptus grandis HOM05D003457 ORTHO05D009746 1.4e-11 73.9 116 37.1
Gorai.012G000800 Gossypium raimondii HOM05D003457 ORTHO05D009746 1.4e-11 73.9 141 34.8
A10p11500 Brassica napus HOM05D003457 ORTHO05D009746 1.8e-11 73.6 180 31.1
Gohir.D04G000055 Gossypium hirsutum HOM05D003457 ORTHO05D009746 1.8e-11 73.6 141 34.8
C09p44480 Brassica napus HOM05D003457 ORTHO05D009746 3.1e-11 72.8 176 30.7
CSS0014628 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009746 3.1e-11 72.8 116 34.5
CSS0016304 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009746 3.1e-11 72.8 116 34.5
Eucgr.K00438 Eucalyptus grandis HOM05D003457 ORTHO05D009746 4.1e-11 72.4 116 37.1
Ciclev10023265m.g Citrus clementina HOM05D003457 ORTHO05D009746 5.4e-11 72.0 108 36.1
COL.COLO4_14369 Corchorus olitorius HOM05D000015 ORTHO05D001173 5.4e-11 72.0 108 39.8
Duzib205G0560 Durio zibethinus HOM05D003457 ORTHO05D009746 9.1e-11 71.2 115 38.3
Glyma.04G228500 Glycine max HOM05D003457 ORTHO05D009746 9.1e-11 71.2 138 34.8
Manes.05G197700 Manihot esculenta HOM05D003457 ORTHO05D009746 1.2e-10 70.9 110 35.5
Ah.07g204680 Amaranthus hybridus HOM05D003457 ORTHO05D009746 1.6e-10 70.5 164 31.1
Peaxi162Scf00300g00834 Petunia axillaris HOM05D003457 ORTHO05D009746 1.6e-10 70.5 142 32.4
CAN.G303.16 Capsicum annuum HOM05D003457 ORTHO05D009746 2.0e-10 70.1 109 41.3
TWI23G0525 Tripterygium wilfordii HOM05D003457 ORTHO05D009746 2.0e-10 70.1 115 40.9
TAR375G1036 Trochodendron aralioides HOM05D003457 ORTHO05D009746 2.0e-10 70.1 187 29.4
Oeu061029.1 Olea europaea HOM05D000015 ORTHO05D001173 2.7e-10 69.7 120 36.7
Sabra15G0003700 Salix brachista HOM05D003457 ORTHO05D009746 2.7e-10 69.7 182 30.2
SalBow2G2559 Salvia bowleyana HOM05D003457 ORTHO05D009746 2.7e-10 69.7 185 31.4
Nitab4.5_0000319g0080 Nicotiana tabacum HOM05D003457 ORTHO05D009746 3.5e-10 69.3 114 37.7
Eucgr.K00030 Eucalyptus grandis HOM05D003457 ORTHO05D009746 4.5e-10 68.9 119 35.3
Sp6g16240 Schrenkiella parvula HOM05D003457 ORTHO05D009746 5.9e-10 68.6 179 29.1
Potri.015G005200 Populus trichocarpa HOM05D003457 ORTHO05D009746 7.7e-10 68.2 170 30.6
Nitab4.5_0005040g0020 Nicotiana tabacum HOM05D003457 ORTHO05D009746 1.0e-09 67.8 114 36.8
Phvul.009G045200 Phaseolus vulgaris HOM05D003457 ORTHO05D009746 1.0e-09 67.8 134 32.1
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 2.3e-09 66.6 107 36.4
Migut.F00989 Erythranthe guttata HOM05D003457 ORTHO05D009746 2.3e-09 66.6 123 38.2
Rhsim09G0209500 Rhododendron simsii HOM05D003457 ORTHO05D009746 2.3e-09 66.6 96 38.5
Aa31LG3G9830 Aethionema arabicum HOM05D003457 ORTHO05D009746 3.8e-09 65.9 146 32.2
ATR1155G022 Amborella trichopoda HOM05D003457 ORTHO05D009746 5.0e-09 65.5 90 45.6
PGSC0003DMG400000587 Solanum tuberosum HOM05D003457 ORTHO05D009746 8.6e-09 64.7 111 39.6
VMungo1309G1701 Vigna mungo HOM05D003457 ORTHO05D009746 8.6e-09 64.7 134 32.1
SGA_v2.0_scaffold141G35560 Striga asiatica HOM05D003457 ORTHO05D009746 1.5e-08 63.9 125 35.2
RcHm_v2.0_Chr1g0382851 Rosa chinensis HOM05D003457 ORTHO05D009746 1.9e-08 63.5 99 34.3
Solyc03g081300.4 Solanum lycopersicum HOM05D003457 ORTHO05D009746 1.9e-08 63.5 109 40.4
Sopen03g022020 Solanum pennellii HOM05D003457 ORTHO05D009746 2.5e-08 63.2 109 40.4
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 5.5e-08 62.0 109 33.9
GSVIVG01038641001 Vitis vinifera HOM05D000015 ORTHO05D001173 5.5e-08 62.0 147 32.0
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 7.2e-08 61.6 109 33.9
AUR62035620 Chenopodium quinoa HOM05D003457 ORTHO05D009746 1.2e-07 60.8 165 28.5
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.2e-07 60.8 109 33.9
vmacro10157 Vaccinium macrocarpon HOM05D003457 ORTHO05D009746 1.2e-07 60.8 107 35.5
Hund21057 Selenicereus undatus HOM05D003457 ORTHO05D009746 2.8e-07 59.7 162 27.2
FvH4_7g32910 Fragaria vesca HOM05D003457 ORTHO05D009746 3.6e-07 59.3 109 33.0
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 3.6e-07 59.3 109 33.0
Cc02_g00830 Coffea canephora HOM05D003457 ORTHO05D009746 6.1e-07 58.5 111 35.1
Lj1g0013970 Lotus japonicus HOM05D003457 ORTHO05D009746 1.4e-06 57.4 107 32.7
EL10Ac3g05181 Beta vulgaris HOM05D003457 ORTHO05D009746 1.8e-06 57.0 157 29.3
Atru.chr12.2427 Acer truncatum HOM05D003457 ORTHO05D009746 4.0e-06 55.8 152 31.6
PGR142G0010 Punica granatum HOM05D003457 ORTHO05D009746 4.0e-06 55.8 104 33.7
Lj1P1027T26 Lonicera japonica HOM05D003457 ORTHO05D009746 5.2e-06 55.5 107 32.7
Actinidia28281 Actinidia chinensis HOM05D003457 ORTHO05D009746 6.8e-06 55.1 142 28.9
Prupe.2G318700 Prunus persica HOM05D003457 ORTHO05D009746 8.8e-06 54.7 114 30.7


User provided reference genes

Program Settings