Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 9.4e-75 283.5 148 100.0
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 2.9e-44 182.2 147 63.3
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 1.9e-43 179.5 147 59.9
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 2.8e-42 175.6 147 59.2
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 1.8e-41 172.9 147 57.8
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 1.8e-41 172.9 147 57.8
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 5.2e-41 171.4 144 58.3
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 6.8e-41 171.0 146 58.2
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 8.9e-41 170.6 147 56.5
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 4.4e-40 168.3 144 57.6
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 7.5e-40 167.5 147 56.5
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 2.2e-39 166.0 147 55.8
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 4.9e-39 164.9 147 56.5
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 8.3e-39 164.1 147 55.1
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 3.1e-38 162.2 147 55.8
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 4.1e-38 161.8 147 54.4
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 7.0e-38 161.0 143 54.5
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 1.2e-37 160.2 147 54.4
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 1.6e-37 159.8 147 54.4
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 2.7e-37 159.1 147 56.5
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 3.5e-37 158.7 149 54.4
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 4.5e-37 158.3 142 54.9
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 4.5e-37 158.3 147 51.7
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 4.5e-37 158.3 147 55.1
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 5.9e-37 157.9 147 52.4
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 5.9e-37 157.9 147 52.4
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 7.8e-37 157.5 147 55.1
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 1.0e-36 157.1 142 58.5
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 2.3e-36 156.0 143 53.8
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 2.3e-36 156.0 143 53.8
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 2.3e-36 156.0 143 53.8
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 2.3e-36 156.0 143 53.8
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 3.8e-36 155.2 141 56.0
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 5.0e-36 154.8 151 53.6
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 8.6e-36 154.1 143 54.5
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 1.1e-35 153.7 147 53.1
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 1.1e-35 153.7 143 53.8
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 1.5e-35 153.3 137 56.2
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 1.5e-35 153.3 144 54.2
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 1.5e-35 153.3 147 51.0
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 1.9e-35 152.9 146 54.8
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 2.5e-35 152.5 144 51.4
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 3.3e-35 152.1 143 51.0
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 3.3e-35 152.1 147 53.1
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 5.6e-35 151.4 143 52.4
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 5.6e-35 151.4 147 55.1
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 5.6e-35 151.4 147 51.0
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 7.3e-35 151.0 143 52.4
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 9.5e-35 150.6 143 53.8
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 9.5e-35 150.6 143 52.4
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 1.2e-34 150.2 143 52.4
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 2.8e-34 149.1 150 51.3
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 2.8e-34 149.1 142 50.7
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 3.6e-34 148.7 144 52.8
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 4.7e-34 148.3 130 59.2
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 4.7e-34 148.3 135 58.5
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 6.1e-34 147.9 151 52.3
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 6.1e-34 147.9 112 60.7
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 8.0e-34 147.5 147 51.0
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 8.0e-34 147.5 147 51.0
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 8.0e-34 147.5 147 51.0
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 1.8e-33 146.4 152 50.7
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 1.8e-33 146.4 153 51.0
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 6.8e-33 144.4 144 54.2
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 6.8e-33 144.4 163 46.6
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 1.2e-32 143.7 131 55.7
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 1.5e-32 143.3 147 46.9
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 5.8e-32 141.4 141 48.9
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 7.5e-32 141.0 145 49.0
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 1.3e-31 140.2 150 49.3
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 2.2e-31 139.4 147 47.6
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 3.7e-31 138.7 143 46.2
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 4.9e-31 138.3 145 46.2
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 4.9e-31 138.3 145 46.2
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 8.3e-31 137.5 143 49.7
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 1.4e-30 136.7 147 44.9
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 1.4e-30 136.7 131 56.5
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 2.4e-30 136.0 148 48.0
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 3.2e-30 135.6 147 49.7
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 1.6e-29 133.3 148 47.3
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 1.6e-29 133.3 147 48.3
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 1.6e-29 133.3 147 49.0
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 2.7e-29 132.5 150 46.0
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 7.8e-29 131.0 111 55.0
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 2.3e-28 129.4 147 46.3
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 8.6e-28 127.5 108 54.6
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 1.9e-27 126.3 147 44.2
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 3.3e-27 125.6 133 54.1
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 5.6e-27 124.8 147 48.3
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 5.6e-27 124.8 147 46.3
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 7.3e-27 124.4 150 47.3
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 7.3e-27 124.4 143 41.3
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 6.2e-26 121.3 147 44.2
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 1.1e-25 120.6 147 43.5
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 1.8e-25 119.8 141 43.3
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 6.8e-25 117.9 138 41.3
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 1.2e-24 117.1 143 42.7
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 1.4e-22 110.2 138 38.4
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 3.5e-21 105.5 107 45.8
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 8.6e-20 100.9 138 39.9
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 1.1e-19 100.5 146 42.5
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 1.9e-19 99.8 115 41.7
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 3.1e-17 92.4 133 33.8
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 1.4e-14 83.6 96 45.8
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 1.3e-12 77.0 147 35.4
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 1.6e-10 70.1 140 30.7
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 2.1e-10 69.7 134 26.1
Os05g0563500 Oryza sativa ssp. japonica HOM05D006561 ORTHO05D008097 6.2e-10 68.2 85 38.8
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 1.4e-09 67.0 127 26.0
Haze_09393 Corylus avellana HOM05D006561 ORTHO05D008097 3.1e-09 65.9 110 40.9
Haze_09398 Corylus avellana HOM05D006561 ORTHO05D008097 5.8e-08 61.6 57 59.6


User provided reference genes

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