Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0245 Ceratophyllum demersum HOM05D007080 ORTHO05D008990 4.2e-81 304.7 159 100.0
Manes.09G000200 Manihot esculenta HOM05D007080 ORTHO05D008990 4.4e-46 188.3 218 50.5
TAR623G1372 Trochodendron aralioides HOM05D007080 ORTHO05D008990 4.4e-46 188.3 220 50.5
Nn7g36949 Nelumbo nucifera HOM05D007080 ORTHO05D008990 5.8e-46 188.0 218 50.0
CANSAT54G2774 Cannabis sativa HOM05D007080 ORTHO05D008990 1.7e-45 186.4 219 51.1
Sabra06G0022700 Salix brachista HOM05D007080 ORTHO05D008990 6.4e-45 184.5 220 48.2
Medtr7g088880 Medicago truncatula HOM05D007080 ORTHO05D008990 1.4e-44 183.3 221 49.3
Glyma.03G123100 Glycine max HOM05D007080 ORTHO05D008990 1.9e-44 183.0 220 47.7
VMungo1383G2155 Vigna mungo HOM05D007080 ORTHO05D008990 1.9e-44 183.0 220 48.6
Ca_08357_v3 Cicer arietinum L. HOM05D007080 ORTHO05D008990 3.2e-44 182.2 222 48.6
Cpa.g.sc52.82 Carica papaya HOM05D007080 ORTHO05D008990 9.2e-44 180.6 218 48.6
Phvul.001G119100 Phaseolus vulgaris HOM05D007080 ORTHO05D008990 9.2e-44 180.6 220 48.2
GSVIVG01025792001 Vitis vinifera HOM05D007080 ORTHO05D008990 9.2e-44 180.6 219 48.9
Potri.006G034300 Populus trichocarpa HOM05D007080 ORTHO05D008990 1.2e-43 180.3 221 47.1
Thecc.05G122900 Theobroma cacao HOM05D007080 ORTHO05D008990 1.6e-43 179.9 218 48.2
vmacro07766 Vaccinium macrocarpon HOM05D007080 ORTHO05D008990 1.6e-43 179.9 221 48.9
Lj1g0027963 Lotus japonicus HOM05D007080 ORTHO05D008990 2.7e-43 179.1 220 47.7
Atru.chr1.1289 Acer truncatum HOM05D007080 ORTHO05D008990 3.5e-43 178.7 221 47.1
THA.LOC104801692 Tarenaya hassleriana HOM05D007080 ORTHO05D008990 3.5e-43 178.7 224 48.2
Ciclev10012378m.g Citrus clementina HOM05D007080 ORTHO05D008990 7.8e-43 177.6 222 47.3
Eucgr.K01671 Eucalyptus grandis HOM05D007080 ORTHO05D008990 7.8e-43 177.6 227 47.6
Haze_11136 Corylus avellana HOM05D007080 ORTHO05D008990 1.0e-42 177.2 221 48.4
QL07p012806 Quercus lobata HOM05D007080 ORTHO05D008990 1.0e-42 177.2 224 47.8
Carub.0005s2340 Capsella rubella HOM05D007080 ORTHO05D008990 1.3e-42 176.8 221 48.4
Glyma.19G126700 Glycine max HOM05D007080 ORTHO05D008990 1.3e-42 176.8 221 47.5
PGR142G4038 Punica granatum HOM05D007080 ORTHO05D008990 1.7e-42 176.4 220 47.7
Aqoxy1G00077 Aquilegia oxysepala HOM05D007080 ORTHO05D008990 3.0e-42 175.6 218 48.2
EL10Ac3g07276 Beta vulgaris HOM05D007080 ORTHO05D008990 3.0e-42 175.6 220 45.9
Cfa017504 Carpinus fangiana HOM05D007080 ORTHO05D008990 3.0e-42 175.6 221 48.0
Actinidia17969 Actinidia chinensis HOM05D007080 ORTHO05D008990 3.9e-42 175.3 221 49.3
arahy.Tifrunner.gnm1.ann1.10W9XD Arachis hypogaea HOM05D007080 ORTHO05D008990 5.0e-42 174.9 218 47.2
arahy.Tifrunner.gnm1.ann1.A7U9PP Arachis hypogaea HOM05D007080 ORTHO05D008990 5.0e-42 174.9 218 47.2
AL5G38020 Arabidopsis lyrata HOM05D007080 ORTHO05D008990 6.6e-42 174.5 211 49.3
CSS0031106 Camellia sinensis var. sinensis HOM05D007080 ORTHO05D008990 6.6e-42 174.5 217 47.9
Lalb_Chr14g0365571 Lupinus albus HOM05D007080 ORTHO05D008990 6.6e-42 174.5 221 47.1
TPR.G22690 Trifolium pratense HOM05D007080 ORTHO05D008990 6.6e-42 174.5 219 47.5
A04p03450 Brassica napus HOM05D007080 ORTHO05D008990 8.6e-42 174.1 221 47.5
BraA04t16092Z Brassica rapa HOM05D007080 ORTHO05D008990 8.6e-42 174.1 221 47.5
Dinv36121 Davidia involucrata HOM05D007080 ORTHO05D008990 8.6e-42 174.1 223 47.1
Os01g0805300 Oryza sativa ssp. japonica HOM05D007080 ORTHO05D008990 8.6e-42 174.1 217 47.9
Thhalv10006177m.g Eutrema salsugineum HOM05D007080 ORTHO05D008990 1.9e-41 172.9 211 48.3
Psat0s1940g0160 Pisum sativum HOM05D007080 ORTHO05D008990 1.9e-41 172.9 219 47.9
PGSC0003DMG400026121 Solanum tuberosum HOM05D007080 ORTHO05D008990 1.9e-41 172.9 218 46.8
Ah.04g150700 Amaranthus hybridus HOM05D007080 ORTHO05D008990 2.5e-41 172.6 220 46.4
BcaB02g08359 Brassica carinata HOM05D007080 ORTHO05D008990 2.5e-41 172.6 221 47.1
AUR62018386 Chenopodium quinoa HOM05D007080 ORTHO05D008990 2.5e-41 172.6 240 42.5
Gohir.D13G111900 Gossypium hirsutum HOM05D007080 ORTHO05D008990 2.5e-41 172.6 219 46.1
Solyc06g065490.3 Solanum lycopersicum HOM05D007080 ORTHO05D008990 2.5e-41 172.6 218 46.8
CSS0023915 Camellia sinensis var. sinensis HOM05D007080 ORTHO05D008990 3.3e-41 172.2 217 47.5
CiPaw.10G043000 Carya illinoinensis HOM05D007080 ORTHO05D008990 3.3e-41 172.2 218 47.2
Sed0014766 Sechium edule HOM05D007080 ORTHO05D008990 3.3e-41 172.2 218 46.8
BcaC02g09857 Brassica carinata HOM05D007080 ORTHO05D008990 4.3e-41 171.8 221 46.6
C04p35850 Brassica napus HOM05D007080 ORTHO05D008990 4.3e-41 171.8 221 46.6
BolC4t25215H Brassica oleracea HOM05D007080 ORTHO05D008990 4.3e-41 171.8 221 46.6
MELO3C005006.2 Cucumis melo HOM05D007080 ORTHO05D008990 4.3e-41 171.8 224 45.5
FAN26G2541 Fragaria x ananassa HOM05D007080 ORTHO05D008990 4.3e-41 171.8 220 45.5
Gohir.A13G109100 Gossypium hirsutum HOM05D007080 ORTHO05D008990 4.3e-41 171.8 219 46.1
Gorai.013G125600 Gossypium raimondii HOM05D007080 ORTHO05D008990 4.3e-41 171.8 219 45.7
FvH4_1g28660 Fragaria vesca HOM05D007080 ORTHO05D008990 5.6e-41 171.4 220 45.5
Hund24550 Selenicereus undatus HOM05D007080 ORTHO05D008990 5.6e-41 171.4 225 45.3
Sopen06g023980 Solanum pennellii HOM05D007080 ORTHO05D008990 5.6e-41 171.4 218 46.8
HPP92_016890 Vanilla planifolia HOM05D007080 ORTHO05D008990 5.6e-41 171.4 218 46.8
RhsimUnG0018800 Rhododendron simsii HOM05D007080 ORTHO05D008990 9.5e-41 170.6 219 45.7
RhsimUnG0209400 Rhododendron simsii HOM05D007080 ORTHO05D008990 1.2e-40 170.2 219 46.1
AT3G56650 Arabidopsis thaliana HOM05D007080 ORTHO05D008990 2.1e-40 169.5 211 48.8
Cc06_g20190 Coffea canephora HOM05D007080 ORTHO05D008990 2.1e-40 169.5 219 45.7
RcHm_v2.0_Chr3g0492661 Rosa chinensis HOM05D007080 ORTHO05D008990 2.1e-40 169.5 220 45.5
FAN19G3092 Fragaria x ananassa HOM05D007080 ORTHO05D008990 2.8e-40 169.1 220 45.0
Duzib106G1879 Durio zibethinus HOM05D007080 ORTHO05D008990 3.6e-40 168.7 220 45.0
SGA_v2.0_scaffold240G44138 Striga asiatica HOM05D007080 ORTHO05D008990 3.6e-40 168.7 223 46.2
Zm00001eb150500 Zea mays HOM05D007080 ORTHO05D008990 4.7e-40 168.3 218 45.4
Migut.K00153 Erythranthe guttata HOM05D007080 ORTHO05D008990 8.1e-40 167.5 221 45.7
unitig_746.g26555 Utricularia gibba HOM05D007080 ORTHO05D008990 1.4e-39 166.8 217 44.7
Aa31LG10G11470 Aethionema arabicum HOM05D007080 ORTHO05D008990 1.8e-39 166.4 221 45.2
Lsat_1_v5_gn_5_157760 Lactuca sativa HOM05D007080 ORTHO05D008990 2.3e-39 166.0 200 48.5
Peaxi162Scf00076g00226 Petunia axillaris HOM05D007080 ORTHO05D008990 2.3e-39 166.0 204 48.5
TWI74G1494 Tripterygium wilfordii HOM05D007080 ORTHO05D008990 2.3e-39 166.0 221 46.2
QL07p012688 Quercus lobata HOM05D007080 ORTHO05D008990 5.2e-39 164.9 256 41.8
AUR62030277 Chenopodium quinoa HOM05D007080 ORTHO05D008990 1.2e-38 163.7 205 45.4
SalBow1G6984 Salvia bowleyana HOM05D007080 ORTHO05D008990 1.2e-38 163.7 220 45.0
CAN.G199.26 Capsicum annuum HOM05D007080 ORTHO05D008990 1.5e-38 163.3 205 47.8
CsaV3_1G013070 Cucumis sativus L. HOM05D007080 ORTHO05D008990 1.5e-38 163.3 218 45.0
Nitab4.5_0006059g0030 Nicotiana tabacum HOM05D007080 ORTHO05D008990 1.5e-38 163.3 205 47.8
ECA248G2633 Erigeron canadensis HOM05D007080 ORTHO05D008990 2.0e-38 162.9 224 45.5
CDE02G2515 Ceratophyllum demersum HOM05D007080 ORTHO05D008990 3.4e-38 162.2 93 90.3
MD03G1200900 Malus domestica HOM05D007080 ORTHO05D008990 3.4e-38 162.2 210 46.2
Prupe.4G213200 Prunus persica HOM05D007080 ORTHO05D008990 3.4e-38 162.2 227 44.5
Nitab4.5_0003160g0050 Nicotiana tabacum HOM05D007080 ORTHO05D008990 5.8e-38 161.4 205 47.3
MSTRG.26172 Avicennia marina HOM05D007080 ORTHO05D008990 7.5e-38 161.0 220 43.6
ATR0307G091 Amborella trichopoda HOM05D007080 ORTHO05D008990 2.2e-37 159.5 217 43.8
ClCG03G002390 Citrullus lanatus HOM05D007080 ORTHO05D008990 4.1e-36 155.2 251 40.2
Lj1A1084T69 Lonicera japonica HOM05D007080 ORTHO05D008990 2.1e-32 142.9 92 75.0
Pp3c4_10510 Physcomitrium patens HOM05D007080 ORTHO05D008990 2.8e-32 142.5 219 40.2
CARHR166760 Cardamine hirsuta HOM05D007080 ORTHO05D008990 3.6e-32 142.1 93 75.3
PSO339G0420 Papaver somniferum HOM05D007080 ORTHO05D008990 6.2e-32 141.4 93 73.1
PSO384G3013 Papaver somniferum HOM05D007080 ORTHO05D008990 6.2e-32 141.4 93 73.1
FAN28G0517 Fragaria x ananassa HOM05D007080 ORTHO05D008990 2.3e-31 139.4 93 74.2
Mapoly0008s0145 Marchantia polymorpha HOM05D007080 ORTHO05D008990 1.5e-30 136.7 199 41.2
SMO347G0313 Selaginella moellendorffii HOM05D007080 ORTHO05D008990 1.2e-27 127.1 197 41.1
RcHm_v2.0_Chr3g0492671 Rosa chinensis HOM05D007080 ORTHO05D008990 1.5e-25 120.2 93 68.8
CBR_g17613 Chara braunii HOM05D007080 ORTHO05D008990 1.5e-22 110.2 101 56.4
AagrBONN_evm.TU.Sc2ySwM_228.1885 Anthoceros agrestis HOM05D007080 ORTHO05D008990 9.9e-22 107.5 194 35.6
COL.COLO4_19390 Corchorus olitorius HOM05D007080 ORTHO05D008990 1.9e-20 103.2 162 41.4
Hma1.2p1_1246F.1_g270150 Hydrangea macrophylla HOM05D007080 ORTHO05D008990 3.4e-14 82.4 55 74.5
Sc19g0007980 Simmondsia chinensis HOM05D007080 ORTHO05D008990 7.6e-14 81.3 58 70.7
Cre06.g280150 Chlamydomonas reinhardtii HOM05D007080 ORTHO05D008990 1.7e-10 70.1 94 39.4
VMungo1215G1337 Vigna mungo HOM05D007080 ORTHO05D008990 3.3e-09 65.9 40 75.0
Hma1.2p1_1246F.1_g270120 Hydrangea macrophylla HOM05D007080 ORTHO05D048338 1.6e-08 63.5 64 56.2
Lj1C1084T4 Lonicera japonica HOM05D007080 ORTHO05D048338 1.6e-08 63.5 60 56.7
CBR_g39641 Chara braunii HOM05D006773 ORTHO05D008775 4.8e-08 62.0 92 37.0
PRCOL_00005035 Prasinoderma coloniale HOM05D007080 ORTHO05D008990 6.2e-08 61.6 100 38.0
Mapoly0002s0218 Marchantia polymorpha HOM05D006773 ORTHO05D008775 4.0e-07 58.9 93 35.5
Pp3c1_24790 Physcomitrium patens HOM05D006773 ORTHO05D008775 6.9e-07 58.2 92 35.9
MCO01G253 Micromonas commoda HOM05D007080 ORTHO05D008990 2.0e-06 56.6 94 29.8
PSO541G0390 Papaver somniferum HOM05D006773 ORTHO05D008775 4.5e-06 55.5 136 30.1
PSO675G5006 Papaver somniferum HOM05D006773 ORTHO05D008775 5.8e-06 55.1 136 30.1
GSVIVG01010018001 Vitis vinifera HOM05D006773 ORTHO05D008775 7.6e-06 54.7 92 38.0
ATR1136G180 Amborella trichopoda HOM05D006773 ORTHO05D008775 9.9e-06 54.3 93 35.5


User provided reference genes

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