Gene: COL.COLO4_19390

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_19390
  • Transcript Identifier COL.rna18153
  • Gene Type Coding gene
  • Location AWUE01016600.1 : 45989-46662 : positive

Gene Family Information

  • ID HOM05D007080
  • #Genes/#Species 113/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna18153
  • GenBank OMO90100.1
  • id gene19362
  • gene_name COLO4_19390
  • uniprot A0A1R3J5L1

Descriptions

  • Description Mog1/PsbP, alpha/beta/alpha sandwich
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
ISO
PLAZA Homology (enrichment)photosynthesis HOM05D007080

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G56650
GO:0005509
ISO
PLAZA Homology (enrichment)calcium ion binding HOM05D007080

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G56650
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G56650
GO:0031977
ISO
PLAZA Integrative Orthologythylakoid lumen AT3G56650
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT3G56650
GO:0009523
ISO
PLAZA Homology (enrichment)photosystem II HOM05D007080
GO:0009654
ISO
PLAZA Homology (enrichment)photosystem II oxygen evolving complex HOM05D007080
GO:0019898
ISO
PLAZA Homology (enrichment)extrinsic component of membrane HOM05D007080
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT3G56650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich
Mapman id Description
35.1 not assigned.annotated