Gene: Solyc06g065490.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g065490.3
  • Transcript Identifier Solyc06g065490.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 38521513-38523883 : negative

Gene Family Information

  • ID HOM05D007080
  • #Genes/#Species 113/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g065490.3.1
  • uniprot A0A3Q7GYY4
  • gene_id Solyc06g065490

Descriptions

  • Description Photosystem II reaction center PsbP family protein (AHRD V3.3 *** A0A0F7CYM1_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
IEA
GOA Databasephotosynthesis
GO:0015979
IEA
InterProphotosynthesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G56650
GO:0005509
IEA
GOA Databasecalcium ion binding
GO:0005509
IEA
InterProcalcium ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009523
IEA
GOA Databasephotosystem II
GO:0009523
IEA
InterProphotosystem II
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT3G56650
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT3G56650
GO:0031977
ISO
PLAZA Integrative Orthologythylakoid lumen AT3G56650
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G56650
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G56650
GO:0019898
IEA
GOA Databaseextrinsic component of membrane
GO:0019898
IEA
InterProextrinsic component of membrane
GO:0009654
IEA
GOA Databasephotosystem II oxygen evolving complex
GO:0009654
IEA
InterProphotosystem II oxygen evolving complex
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002683 PsbP, C-terminal
IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich
Mapman id Description
35.1 not assigned.annotated