Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0179 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 1.9e-303 1045.0 532 100.0
MBI17_g39341_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 6.5e-86 322.4 542 41.3
Nn6g33500 Nelumbo nucifera HOM05D005579 ORTHO05D006775 1.7e-73 281.2 545 37.4
TAR367G0001 Trochodendron aralioides HOM05D005579 ORTHO05D006775 1.9e-69 267.7 543 38.9
Dinv28443 Davidia involucrata HOM05D005579 ORTHO05D006775 4.9e-65 253.1 594 35.4
GSVIVG01028977001 Vitis vinifera HOM05D005579 ORTHO05D006775 1.1e-64 251.9 602 35.4
CiPaw.04G071000 Carya illinoinensis HOM05D005579 ORTHO05D006775 1.4e-64 251.5 586 36.0
PSO063G6446 Papaver somniferum HOM05D005579 ORTHO05D006775 9.2e-64 248.8 544 36.8
PSO782G1268 Papaver somniferum HOM05D005579 ORTHO05D006775 1.2e-63 248.4 543 36.8
Hma1.2p1_0270F.1_g108020 Hydrangea macrophylla HOM05D005579 ORTHO05D006775 1.1e-61 241.9 595 34.5
Atru.chr1.458 Acer truncatum HOM05D005579 ORTHO05D006775 2.5e-61 240.7 589 36.7
Haze_13712 Corylus avellana HOM05D005579 ORTHO05D006775 5.2e-59 233.0 582 34.4
FvH4_7g29470 Fragaria vesca HOM05D005579 ORTHO05D006775 6.8e-59 232.6 593 32.7
Rhsim03G0180800 Rhododendron simsii HOM05D005579 ORTHO05D006775 1.5e-58 231.5 586 35.3
Prupe.2G294300 Prunus persica HOM05D005579 ORTHO05D006775 3.4e-58 230.3 591 34.9
QL09p014220 Quercus lobata HOM05D005579 ORTHO05D006775 3.4e-58 230.3 586 34.6
ATR0680G156 Amborella trichopoda HOM05D005579 ORTHO05D006775 9.8e-58 228.8 665 31.6
FAN01G1040 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.3e-57 228.4 591 33.3
Manes.06G147100 Manihot esculenta HOM05D005579 ORTHO05D006775 2.2e-57 227.6 567 35.1
Cfa008319 Carpinus fangiana HOM05D005579 ORTHO05D006775 2.9e-57 227.3 591 33.3
Thecc.03G176600 Theobroma cacao HOM05D005579 ORTHO05D006775 6.4e-57 226.1 590 33.4
FAN03G0333 Fragaria x ananassa HOM05D005579 ORTHO05D006775 3.2e-56 223.8 595 33.1
Potri.012G141100 Populus trichocarpa HOM05D005579 ORTHO05D006775 4.1e-56 223.4 598 33.6
Ciclev10006492m.g Citrus clementina HOM05D005579 ORTHO05D006775 7.1e-56 222.6 590 34.1
COL.COLO4_14309 Corchorus olitorius HOM05D005579 ORTHO05D006775 1.6e-55 221.5 591 33.2
CSS0017636 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 4.6e-55 219.9 592 32.1
Sed0022815 Sechium edule HOM05D005579 ORTHO05D006775 6.0e-55 219.5 583 32.6
CSS0047196 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 1.0e-54 218.8 591 32.7
CANSAT21G2370 Cannabis sativa HOM05D005579 ORTHO05D006775 3.0e-54 217.2 583 34.3
FAN03G0790 Fragaria x ananassa HOM05D005579 ORTHO05D006775 3.0e-54 217.2 615 33.8
Duzib068G1336 Durio zibethinus HOM05D005579 ORTHO05D006775 3.9e-54 216.9 592 33.6
EL10Ac3g05643 Beta vulgaris HOM05D005579 ORTHO05D006775 1.1e-53 215.3 594 34.2
ClCG09G012930 Citrullus lanatus HOM05D005579 ORTHO05D006775 1.1e-53 215.3 589 33.3
Migut.F00340 Erythranthe guttata HOM05D005579 ORTHO05D006775 1.5e-53 214.9 587 31.3
FAN06G0670 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.5e-53 214.2 613 31.3
Lsat_1_v5_gn_9_55980 Lactuca sativa HOM05D005579 ORTHO05D006775 3.3e-53 213.8 532 34.2
ECA232G1470 Erigeron canadensis HOM05D005579 ORTHO05D006775 1.2e-52 211.8 540 36.1
Ah.07g207210 Amaranthus hybridus HOM05D005579 ORTHO05D006775 2.1e-52 211.1 599 33.4
RcHm_v2.0_Chr1g0377251 Rosa chinensis HOM05D005579 ORTHO05D006775 3.6e-52 210.3 576 31.4
Sabra12G0106200 Salix brachista HOM05D005579 ORTHO05D006775 3.6e-52 210.3 601 31.1
Peaxi162Scf00444g00841 Petunia axillaris HOM05D005579 ORTHO05D006775 4.7e-52 209.9 595 32.4
Actinidia32860 Actinidia chinensis HOM05D005579 ORTHO05D006775 8.1e-52 209.1 497 34.2
Eucgr.L01677 Eucalyptus grandis HOM05D005579 ORTHO05D006775 2.3e-51 207.6 582 32.3
Lj2g0003134 Lotus japonicus HOM05D005579 ORTHO05D006775 6.8e-51 206.1 592 31.8
CAN.G490.30 Capsicum annuum HOM05D005579 ORTHO05D006775 2.6e-50 204.1 594 32.7
AUR62021193 Chenopodium quinoa HOM05D005579 ORTHO05D006775 5.8e-50 203.0 597 32.5
MELO3C003322.2 Cucumis melo HOM05D005579 ORTHO05D006775 5.8e-50 203.0 594 33.0
Gohir.D12G259200 Gossypium hirsutum HOM05D005579 ORTHO05D006775 5.8e-50 203.0 581 32.2
Nitab4.5_0000716g0010 Nicotiana tabacum HOM05D005579 ORTHO05D006775 5.8e-50 203.0 608 31.2
Sc13g0008650 Simmondsia chinensis HOM05D005579 ORTHO05D006775 5.8e-50 203.0 590 34.1
Solyc03g025820.3 Solanum lycopersicum HOM05D005579 ORTHO05D006775 5.8e-50 203.0 598 31.6
Nitab4.5_0009681g0030 Nicotiana tabacum HOM05D005579 ORTHO05D006775 7.6e-50 202.6 592 31.1
Cpa.g.sc107.52 Carica papaya HOM05D005579 ORTHO05D006775 9.9e-50 202.2 562 33.6
Phvul.004G117000 Phaseolus vulgaris HOM05D005579 ORTHO05D006775 1.3e-49 201.8 590 31.7
SalBow4G1821 Salvia bowleyana HOM05D005579 ORTHO05D006775 1.7e-49 201.4 618 30.4
SalBow4G2278 Salvia bowleyana HOM05D005579 ORTHO05D006775 1.7e-49 201.4 618 30.4
Sopen03g004630 Solanum pennellii HOM05D005579 ORTHO05D006775 2.2e-49 201.1 598 31.6
Cc02_g02990 Coffea canephora HOM05D005579 ORTHO05D006775 4.9e-49 199.9 594 31.1
MD07G1268700 Malus domestica HOM05D005579 ORTHO05D006775 4.9e-49 199.9 607 31.8
FAN06G0715 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.4e-48 198.4 527 32.3
CsaV3_3G049940 Cucumis sativus L. HOM05D005579 ORTHO05D006775 2.4e-48 197.6 593 33.2
PGR142G3926 Punica granatum HOM05D005579 ORTHO05D006775 4.1e-48 196.8 576 32.8
PGSC0003DMG400014341 Solanum tuberosum HOM05D005579 ORTHO05D006775 9.2e-48 195.7 605 31.1
DCAR_018198 Daucus carota HOM05D005579 ORTHO05D006775 6.0e-47 193.0 599 31.4
Lalb_Chr19g0130861 Lupinus albus HOM05D005579 ORTHO05D006775 3.0e-46 190.7 574 31.4
HanXRQChr15g0495541 Helianthus annuus HOM05D005579 ORTHO05D006775 3.9e-46 190.3 547 34.0
Glyma.09G139400 Glycine max HOM05D005579 ORTHO05D006775 6.6e-46 189.5 538 32.0
Os02g0642600 Oryza sativa ssp. japonica HOM05D005579 ORTHO05D006775 3.3e-45 187.2 551 31.9
Zm00001eb248620 Zea mays HOM05D005579 ORTHO05D006775 3.3e-45 187.2 561 30.3
AUR62015985 Chenopodium quinoa HOM05D005579 ORTHO05D006775 5.6e-45 186.4 576 31.8
Psat0s2227g0080 Pisum sativum HOM05D005579 ORTHO05D006775 6.9e-43 179.5 577 29.8
Aa31LG3G8710 Aethionema arabicum HOM05D005579 ORTHO05D006775 1.5e-42 178.3 600 29.8
MD01G1200800 Malus domestica HOM05D005579 ORTHO05D006775 2.0e-42 177.9 564 30.0
Gorai.008G277600 Gossypium raimondii HOM05D005579 ORTHO05D006775 2.6e-42 177.6 499 32.5
Gohir.A12G257850 Gossypium hirsutum HOM05D005579 ORTHO05D006775 3.4e-42 177.2 497 32.8
SGA_v2.0_scaffold60G21038 Striga asiatica HOM05D005579 ORTHO05D006775 4.4e-42 176.8 580 30.3
VMungo0464G1636 Vigna mungo HOM05D005579 ORTHO05D006775 5.8e-42 176.4 579 29.5
Carub.0008s1239 Capsella rubella HOM05D005579 ORTHO05D006775 2.9e-41 174.1 606 30.4
AL8G26680 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 4.9e-41 173.3 605 29.6
AT5G52290 Arabidopsis thaliana HOM05D005579 ORTHO05D006775 8.4e-41 172.6 609 29.9
Thhalv10015364m.g Eutrema salsugineum HOM05D005579 ORTHO05D006775 1.9e-40 171.4 609 30.7
arahy.Tifrunner.gnm1.ann1.TEHT7Q Arachis hypogaea HOM05D005579 ORTHO05D006775 7.1e-40 169.5 518 30.3
AL271U10020 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 9.3e-40 169.1 605 29.4
THA.LOC104800252 Tarenaya hassleriana HOM05D005579 ORTHO05D006775 1.2e-39 168.7 594 29.0
TPR.G10740 Trifolium pratense HOM05D005579 ORTHO05D006775 1.6e-39 168.3 585 28.5
C03p18410 Brassica napus HOM05D005579 ORTHO05D006775 2.1e-39 167.9 598 29.9
BolC3t14238H Brassica oleracea HOM05D005579 ORTHO05D006775 2.1e-39 167.9 598 29.9
FAN10G2011 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.7e-39 167.5 156 60.9
Sp6g14550 Schrenkiella parvula HOM05D005579 ORTHO05D006775 2.7e-39 167.5 595 29.2
arahy.Tifrunner.gnm1.ann1.Q0IWYL Arachis hypogaea HOM05D005579 ORTHO05D006775 7.8e-39 166.0 521 30.5
Medtr6g045357 Medicago truncatula HOM05D005579 ORTHO05D006775 1.0e-38 165.6 540 29.8
A03p15740 Brassica napus HOM05D005579 ORTHO05D006775 1.3e-38 165.2 596 28.4
CARHR265270 Cardamine hirsuta HOM05D005579 ORTHO05D006775 1.7e-38 164.9 607 29.7
BraA03t10864Z Brassica rapa HOM05D005579 ORTHO05D006775 3.0e-38 164.1 596 28.4
BcaB01g04199 Brassica carinata HOM05D005579 ORTHO05D006775 5.1e-38 163.3 601 28.8
FAN10G0535 Fragaria x ananassa HOM05D005579 ORTHO05D006775 5.1e-38 163.3 526 31.4
BcaC01g06176 Brassica carinata HOM05D005579 ORTHO05D006775 8.7e-38 162.5 604 28.8
unitig_37.g12526 Utricularia gibba HOM05D005579 ORTHO05D006775 3.3e-37 160.6 584 29.6
TWI23G0169 Tripterygium wilfordii HOM05D005579 ORTHO05D006775 8.1e-36 156.0 526 30.6
Hund11748 Selenicereus undatus HOM05D005579 ORTHO05D006775 1.9e-32 144.8 520 30.8
MBI17_g46332_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 3.2e-32 144.1 177 49.2
SHI39775 Sapria himalayana HOM05D005579 ORTHO05D006775 9.3e-32 142.5 544 29.4
Actinidia34112 Actinidia chinensis HOM05D005579 ORTHO05D006775 2.3e-30 137.9 119 61.3
MBI17_g46331_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 4.0e-27 127.1 309 34.0
HPP92_008526 Vanilla planifolia HOM05D005579 ORTHO05D006775 1.5e-21 108.6 90 64.4
SMO364G0179 Selaginella moellendorffii HOM05D005579 ORTHO05D006775 1.9e-13 81.6 121 34.7
Mapoly0013s0198 Marchantia polymorpha HOM05D005579 ORTHO05D006775 2.0e-10 71.6 117 37.6
Pp3c13_14750 Physcomitrium patens HOM05D005579 ORTHO05D006775 3.6e-07 60.8 125 32.8
Pp3c21_13440 Physcomitrium patens HOM05D005579 ORTHO05D006775 3.9e-06 57.4 146 30.1


User provided reference genes

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