Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1842 Ceratophyllum demersum HOM05D004774 ORTHO05D005514 3.3e-74 281.6 138 100.0
GSVIVG01000730001 Vitis vinifera HOM05D004774 ORTHO05D005514 2.2e-41 172.6 192 48.4
GSVIVG01011075001 Vitis vinifera HOM05D004774 ORTHO05D005514 3.7e-41 171.8 192 47.9
QL08p045287 Quercus lobata HOM05D004774 ORTHO05D005514 1.1e-40 170.2 192 47.4
CiPaw.06G137100 Carya illinoinensis HOM05D004774 ORTHO05D005514 7.0e-40 167.5 192 46.4
Nn4g23666 Nelumbo nucifera HOM05D004774 ORTHO05D005514 1.2e-39 166.8 192 47.9
TAR636G0805 Trochodendron aralioides HOM05D004774 ORTHO05D005514 2.7e-39 165.6 190 47.9
MBI04_g06856_MAGBIO Magnolia biondii HOM05D004774 ORTHO05D005514 3.5e-39 165.2 187 47.1
Os07g0477000 Oryza sativa ssp. japonica HOM05D004774 ORTHO05D005514 3.5e-39 165.2 187 47.6
Cc01_g18810 Coffea canephora HOM05D004774 ORTHO05D005514 1.3e-38 163.3 192 46.4
Dinv22475 Davidia involucrata HOM05D004774 ORTHO05D005514 1.7e-38 162.9 192 47.4
Dinv40162 Davidia involucrata HOM05D004774 ORTHO05D005514 5.0e-38 161.4 192 47.9
Cpa.g.sc52.135 Carica papaya HOM05D004774 ORTHO05D005514 1.5e-37 159.8 192 45.8
Cfa005024 Carpinus fangiana HOM05D004774 ORTHO05D005514 1.5e-37 159.8 194 44.8
SMO298G0040 Selaginella moellendorffii HOM05D004774 ORTHO05D005514 1.5e-37 159.8 155 51.0
PSO017G6900 Papaver somniferum HOM05D004774 ORTHO05D005514 1.9e-37 159.5 186 47.3
Thecc.01G266900 Theobroma cacao HOM05D004774 ORTHO05D005514 3.2e-37 158.7 202 45.5
CANSAT35G0005 Cannabis sativa HOM05D004774 ORTHO05D005514 4.2e-37 158.3 192 42.7
PSO170G5180 Papaver somniferum HOM05D004774 ORTHO05D005514 7.2e-37 157.5 186 45.7
Lalb_Chr17g0348441 Lupinus albus HOM05D004774 ORTHO05D005514 1.6e-36 156.4 199 44.2
EL10Ac3g05825 Beta vulgaris HOM05D004774 ORTHO05D005514 2.1e-36 156.0 191 44.0
Nitab4.5_0003289g0060 Nicotiana tabacum HOM05D004774 ORTHO05D005514 2.7e-36 155.6 193 44.6
Atru.chr5.1584 Acer truncatum HOM05D004774 ORTHO05D005514 3.6e-36 155.2 192 43.8
Gohir.A07G209300 Gossypium hirsutum HOM05D004774 ORTHO05D005514 3.6e-36 155.2 202 44.6
Aqoxy7G03988 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 4.7e-36 154.8 185 45.9
Manes.01G201400 Manihot esculenta HOM05D004774 ORTHO05D005514 4.7e-36 154.8 203 42.9
Gohir.D07G215400 Gossypium hirsutum HOM05D004774 ORTHO05D005514 6.1e-36 154.5 202 44.1
Gorai.001G243200 Gossypium raimondii HOM05D004774 ORTHO05D005514 6.1e-36 154.5 202 44.1
Potri.002G044500 Populus trichocarpa HOM05D004774 ORTHO05D005514 6.1e-36 154.5 192 44.3
Duzib138G0586 Durio zibethinus HOM05D004774 ORTHO05D005514 8.0e-36 154.1 202 44.1
Aqoxy1G01668 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 1.0e-35 153.7 185 45.9
Phvul.010G020150 Phaseolus vulgaris HOM05D004774 ORTHO05D005514 1.0e-35 153.7 205 42.9
Phvul.010G020200 Phaseolus vulgaris HOM05D004774 ORTHO05D005514 1.0e-35 153.7 205 42.9
Aqoxy4G03157 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 1.4e-35 153.3 185 45.9
CAN.G1190.29 Capsicum annuum HOM05D004774 ORTHO05D005514 1.8e-35 152.9 192 45.8
COL.COLO4_05101 Corchorus olitorius HOM05D004774 ORTHO05D005514 1.8e-35 152.9 205 42.4
HPP92_015388 Vanilla planifolia HOM05D004774 ORTHO05D005514 1.8e-35 152.9 189 45.5
AUR62002186 Chenopodium quinoa HOM05D004774 ORTHO05D005514 2.3e-35 152.5 192 43.8
Lj4g0014477 Lotus japonicus HOM05D004774 ORTHO05D005514 3.0e-35 152.1 193 45.1
HPP92_027004 Vanilla planifolia HOM05D004774 ORTHO05D005514 4.0e-35 151.8 189 45.0
Aa31LG1G7840 Aethionema arabicum HOM05D004480 ORTHO05D005546 5.2e-35 151.4 194 41.2
Sc04g0000740 Simmondsia chinensis HOM05D004774 ORTHO05D005514 5.2e-35 151.4 192 41.1
Sopen07g002340 Solanum pennellii HOM05D004774 ORTHO05D005514 5.2e-35 151.4 192 43.8
VMungo0331G0358 Vigna mungo HOM05D002747 ORTHO05D005514 5.2e-35 151.4 205 42.9
SEGI_34955 Sequoiadendron giganteum HOM05D004774 ORTHO05D005514 6.8e-35 151.0 189 42.9
Migut.D00377 Erythranthe guttata HOM05D004774 ORTHO05D005514 8.8e-35 150.6 199 45.2
Glyma.03G218500 Glycine max HOM05D004774 ORTHO05D005514 8.8e-35 150.6 206 43.7
TWI12G1255 Tripterygium wilfordii HOM05D004774 ORTHO05D005514 8.8e-35 150.6 192 42.7
MSTRG.18290 Avicennia marina HOM05D004774 ORTHO05D005514 1.5e-34 149.8 202 42.6
Glyma.19G215300 Glycine max HOM05D004774 ORTHO05D005514 2.0e-34 149.4 204 43.6
Solyc07g006240.4 Solanum lycopersicum HOM05D004774 ORTHO05D005514 2.0e-34 149.4 198 42.4
THA.LOC104815831 Tarenaya hassleriana HOM05D004774 ORTHO05D005514 4.4e-34 148.3 192 40.6
Ca_26554_v3 Cicer arietinum L. HOM05D004774 ORTHO05D005514 7.5e-34 147.5 196 42.3
Psat3g097920 Pisum sativum HOM05D004774 ORTHO05D005514 7.5e-34 147.5 193 43.5
SMO012G0037 Selaginella moellendorffii HOM05D004774 ORTHO05D005514 7.5e-34 147.5 187 42.2
Thhalv10028967m.g Eutrema salsugineum HOM05D004774 ORTHO05D005514 9.8e-34 147.1 194 40.7
Carub.0001s0611 Capsella rubella HOM05D004774 ORTHO05D005514 1.7e-33 146.4 192 40.6
RcHm_v2.0_Chr5g0063451 Rosa chinensis HOM05D004774 ORTHO05D005514 1.7e-33 146.4 191 43.5
Sed0022653 Sechium edule HOM05D004774 ORTHO05D005514 1.7e-33 146.4 210 39.5
CARHR006490 Cardamine hirsuta HOM05D004774 ORTHO05D005514 2.8e-33 145.6 194 41.2
AL1G16800 Arabidopsis lyrata HOM05D004774 ORTHO05D005514 3.7e-33 145.2 194 39.2
Duzib211G0067 Durio zibethinus HOM05D004774 ORTHO05D005514 3.7e-33 145.2 201 41.8
MD08G1227600 Malus domestica HOM05D004774 ORTHO05D005514 3.7e-33 145.2 193 42.0
Prupe.2G103200 Prunus persica HOM05D004774 ORTHO05D005514 4.9e-33 144.8 194 41.2
MELO3C023634.2 Cucumis melo HOM05D004774 ORTHO05D005514 8.3e-33 144.1 124 58.1
CsaV3_7G030220 Cucumis sativus L. HOM05D004774 ORTHO05D005514 8.3e-33 144.1 124 58.1
Duzib211G0109 Durio zibethinus HOM05D004774 ORTHO05D005514 8.3e-33 144.1 201 42.8
Sp1g05530 Schrenkiella parvula HOM05D004774 ORTHO05D005514 8.3e-33 144.1 194 40.2
BraA08t35495Z Brassica rapa HOM05D004774 ORTHO05D005514 1.1e-32 143.7 193 40.4
TWI18G0081 Tripterygium wilfordii HOM05D004774 ORTHO05D005514 1.8e-32 142.9 192 40.6
CSS0049587 Camellia sinensis var. sinensis HOM05D004774 ORTHO05D005514 2.4e-32 142.5 235 38.7
A08p35880 Brassica napus HOM05D004774 ORTHO05D005514 5.4e-32 141.4 193 40.9
C08p02690 Brassica napus HOM05D004774 ORTHO05D005514 5.4e-32 141.4 193 40.9
BolC8t47065H Brassica oleracea HOM05D004774 ORTHO05D005514 5.4e-32 141.4 193 40.9
Hma1.2p1_1029F.1_g249620 Hydrangea macrophylla HOM05D004774 ORTHO05D005514 5.4e-32 141.4 226 37.6
Hma1.2p1_1029F.1_g249641 Hydrangea macrophylla HOM05D004774 ORTHO05D005514 5.4e-32 141.4 226 37.6
ClCG09G004860 Citrullus lanatus HOM05D004774 ORTHO05D005514 7.0e-32 141.0 91 70.3
Lsat_1_v5_gn_5_176641 Lactuca sativa HOM05D004774 ORTHO05D005514 7.0e-32 141.0 193 40.4
vmacro02628 Vaccinium macrocarpon HOM05D004774 ORTHO05D005514 9.1e-32 140.6 228 39.9
FvH4_1g22880 Fragaria vesca HOM05D004774 ORTHO05D005514 2.7e-31 139.0 191 40.8
FAN19G2773 Fragaria x ananassa HOM05D004774 ORTHO05D005514 2.7e-31 139.0 191 40.8
Mapoly0050s0102 Marchantia polymorpha HOM05D004774 ORTHO05D005514 3.5e-31 138.7 187 38.0
Rhsim13G0031100 Rhododendron simsii HOM05D004774 ORTHO05D005514 1.0e-30 137.1 91 74.7
ECA247G2354 Erigeron canadensis HOM05D002220 ORTHO05D008182 1.7e-30 136.3 190 42.1
AUR62015525 Chenopodium quinoa HOM05D004774 ORTHO05D005514 2.9e-30 135.6 177 44.6
Medtr8g072680 Medicago truncatula HOM05D004774 ORTHO05D005514 3.8e-30 135.2 191 39.8
Nitab4.5_0001427g0080 Nicotiana tabacum HOM05D004774 ORTHO05D005514 1.1e-29 133.7 91 71.4
A09p66780 Brassica napus HOM05D004774 ORTHO05D005514 1.5e-29 133.3 193 39.4
BolC8t52628H Brassica oleracea HOM05D004774 ORTHO05D005514 1.9e-29 132.9 192 40.1
AagrBONN_evm.TU.Sc2ySwM_344.4376 Anthoceros agrestis HOM05D004774 ORTHO05D005514 3.3e-29 132.1 189 38.1
Ciclev10023915m.g Citrus clementina HOM05D004774 ORTHO05D005514 3.3e-29 132.1 91 70.3
Eucgr.B01492 Eucalyptus grandis HOM05D004774 ORTHO05D005514 3.3e-29 132.1 92 68.5
FAN23G2064 Fragaria x ananassa HOM05D004774 ORTHO05D005514 5.5e-29 131.3 210 38.1
SGA_v2.0_scaffold138G35272 Striga asiatica HOM05D004774 ORTHO05D005514 5.5e-29 131.3 107 59.8
CDE07G0321 Ceratophyllum demersum HOM05D004774 ORTHO05D005514 7.2e-29 131.0 199 45.7
Sabra02G0035700 Salix brachista HOM05D004774 ORTHO05D005514 7.2e-29 131.0 98 62.2
SHI09938 Sapria himalayana HOM05D004774 ORTHO05D000023 7.2e-29 131.0 94 66.0
VMungo1309G2525 Vigna mungo HOM05D004774 ORTHO05D005514 7.2e-29 131.0 85 75.3
PSO339G5528 Papaver somniferum HOM05D004774 ORTHO05D005514 9.5e-29 130.6 89 68.5
Pp3c7_17850 Physcomitrium patens HOM05D004774 ORTHO05D005514 9.5e-29 130.6 188 38.3
C08p51000 Brassica napus HOM05D004774 ORTHO05D005514 1.6e-28 129.8 198 38.9
Lj4A469T41 Lonicera japonica HOM05D004774 ORTHO05D005514 1.6e-28 129.8 98 69.4
Aqoxy7G03987 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 3.6e-28 128.6 91 65.9
ATR0665G644 Amborella trichopoda HOM05D004774 ORTHO05D005514 1.4e-27 126.7 100 60.0
Ca_27275_v3 Cicer arietinum L. HOM05D004774 ORTHO05D005514 5.2e-27 124.8 85 71.8
AT1G06790 Arabidopsis thaliana HOM05D004774 ORTHO05D005514 6.8e-27 124.4 91 63.7
DCAR_002682 Daucus carota HOM05D004774 ORTHO05D005514 8.9e-27 124.0 82 72.0
SGA_v2.0_scaffold43G16236 Striga asiatica HOM05D004774 ORTHO05D005514 8.9e-27 124.0 91 65.9
arahy.Tifrunner.gnm1.ann1.KW6T12 Arachis hypogaea HOM05D004774 ORTHO05D005514 1.2e-26 123.6 81 71.6
Zm00001eb319960 Zea mays HOM05D004774 ORTHO05D005514 1.2e-26 123.6 98 61.2
PGSC0003DMG400011166 Solanum tuberosum HOM05D004774 ORTHO05D005514 1.5e-26 123.2 98 67.3
BraA09t42016Z Brassica rapa HOM05D004774 ORTHO05D005514 2.6e-26 122.5 222 34.2
BcaC07g42048 Brassica carinata HOM05D004774 ORTHO05D005514 1.3e-25 120.2 192 39.1
FAN26G2874 Fragaria x ananassa HOM05D004774 ORTHO05D005514 4.9e-25 118.2 176 39.2
TPR.G27929 Trifolium pratense HOM05D004774 ORTHO05D005514 2.4e-24 115.9 85 67.1
BcaC07g42538 Brassica carinata HOM05D004774 ORTHO05D005514 4.1e-24 115.2 91 60.4
FAN21G2916 Fragaria x ananassa HOM05D004774 ORTHO05D005514 9.2e-24 114.0 91 62.6
GSVIVG01021945001 Vitis vinifera HOM05D004774 ORTHO05D005514 3.5e-23 112.1 101 56.4
Cre12.g538400 Chlamydomonas reinhardtii HOM05D004774 ORTHO05D005514 6.6e-22 107.8 199 32.2
GSVIVG01000731001 Vitis vinifera HOM05D004774 ORTHO05D005514 1.1e-21 107.1 76 75.0
GSVIVG01021951001 Vitis vinifera HOM05D004774 ORTHO05D005514 3.3e-21 105.5 106 54.7
Haze_02362 Corylus avellana HOM05D004774 ORTHO05D005514 7.3e-21 104.4 70 71.4
unitig_0.g1128 Utricularia gibba HOM05D004774 ORTHO05D005514 6.8e-19 97.8 118 44.9
Peaxi162Scf00934g00135 Petunia axillaris HOM05D004774 ORTHO05D005514 5.8e-18 94.7 192 35.4
GSVIVG01004486001 Vitis vinifera HOM05D004774 ORTHO05D005514 7.5e-18 94.4 70 61.4
TPR.G27610 Trifolium pratense HOM05D004774 ORTHO05D005514 2.9e-17 92.4 68 67.6
MCO09G483 Micromonas commoda HOM05D004774 ORTHO05D005514 3.2e-16 89.0 202 29.2
FAN11G3419 Fragaria x ananassa HOM05D004774 ORTHO05D005514 1.2e-12 77.0 134 34.3
CBR_g31683 Chara braunii HOM05D004774 ORTHO05D005514 2.6e-10 69.3 82 39.0
TPR.G26057 Trifolium pratense HOM05D004774 ORTHO05D005514 5.8e-10 68.2 44 63.6
BolC8t46832H Brassica oleracea HOM05D004774 ORTHO05D005514 6.4e-09 64.7 64 46.9
Nn1g02575 Nelumbo nucifera HOM05D004774 ORTHO05D005514 2.4e-08 62.8 120 30.8
C01p24870 Brassica napus HOM05D041306 ORTHO05D005514 3.2e-08 62.4 66 45.5
FAN28G1675 Fragaria x ananassa HOM05D004774 ORTHO05D005514 4.1e-08 62.0 64 51.6
Haze_02361 Corylus avellana HOM05D004774 ORTHO05D005514 2.7e-07 59.3 47 51.1
Lalb_Chr23g0275811 Lupinus albus HOM05D004774 ORTHO05D005514 6.0e-07 58.2 97 43.3
TPR.G27925 Trifolium pratense HOM05D004774 ORTHO05D005514 1.0e-06 57.4 49 46.9
PGR119G0353 Punica granatum HOM05D004774 ORTHO05D005514 1.3e-06 57.0 53 49.1
A03p16490 Brassica napus HOM05D037327 ORTHO05D005514 6.6e-06 54.7 42 47.6


User provided reference genes

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