Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1238 Ceratophyllum demersum HOM05D001374 ORTHO05D004296 5.3e-69 264.2 133 100.0
CDE06G1000 Ceratophyllum demersum HOM05D001374 ORTHO05D004296 6.9e-53 210.7 105 98.1
Os01g0185200 Oryza sativa ssp. japonica HOM05D001374 ORTHO05D004296 5.3e-45 184.5 103 84.5
Zm00001eb121810 Zea mays HOM05D001374 ORTHO05D004296 5.3e-45 184.5 105 81.9
Zm00001eb337800 Zea mays HOM05D001374 ORTHO05D004296 7.0e-45 184.1 105 81.0
Os05g0182800 Oryza sativa ssp. japonica HOM05D001374 ORTHO05D004296 2.0e-44 182.6 103 82.5
TAR371G0094 Trochodendron aralioides HOM05D001374 ORTHO05D004296 2.0e-44 182.6 104 81.7
PSO063G7347 Papaver somniferum HOM05D001374 ORTHO05D004296 3.5e-44 181.8 104 82.7
PSO782G3382 Papaver somniferum HOM05D001374 ORTHO05D004296 3.5e-44 181.8 104 82.7
ATR0691G154 Amborella trichopoda HOM05D001374 ORTHO05D004296 4.5e-44 181.4 104 80.8
Hund20774 Selenicereus undatus HOM05D001374 ORTHO05D004296 4.5e-44 181.4 103 80.6
Prupe.1G313400 Prunus persica HOM05D001374 ORTHO05D004296 1.0e-43 180.3 105 81.0
MSTRG.850 Avicennia marina HOM05D001374 ORTHO05D004296 1.7e-43 179.5 105 80.0
AUR62002847 Chenopodium quinoa HOM05D001374 ORTHO05D004296 1.7e-43 179.5 105 81.9
CAN.G610.65 Capsicum annuum HOM05D001374 ORTHO05D004296 2.9e-43 178.7 105 78.1
Hma1.2p1_0061F.1_g033680 Hydrangea macrophylla HOM05D001374 ORTHO05D004296 2.9e-43 178.7 105 81.0
PGSC0003DMG400014572 Solanum tuberosum HOM05D001374 ORTHO05D004296 2.9e-43 178.7 105 79.0
Ah.03g138230 Amaranthus hybridus HOM05D001374 ORTHO05D004296 3.8e-43 178.3 105 80.0
CSS0047778 Camellia sinensis var. sinensis HOM05D001374 ORTHO05D004296 3.8e-43 178.3 105 80.0
MSTRG.2228 Avicennia marina HOM05D001374 ORTHO05D004296 5.0e-43 177.9 105 80.0
Aqoxy3G00265 Aquilegia oxysepala HOM05D001374 ORTHO05D004296 6.5e-43 177.6 104 81.7
AUR62037316 Chenopodium quinoa HOM05D001374 ORTHO05D004296 6.5e-43 177.6 105 80.0
Oeu054996.3 Olea europaea HOM05D001374 ORTHO05D004296 6.5e-43 177.6 105 79.0
Actinidia14906 Actinidia chinensis HOM05D001374 ORTHO05D004296 8.5e-43 177.2 105 78.1
CSS0016974 Camellia sinensis var. sinensis HOM05D001374 ORTHO05D004296 8.5e-43 177.2 105 80.0
CSS0034691 Camellia sinensis var. sinensis HOM05D001374 ORTHO05D004296 8.5e-43 177.2 105 80.0
GSVIVG01011871001 Vitis vinifera HOM05D001374 ORTHO05D004296 8.5e-43 177.2 105 79.0
CiPaw.05G239400 Carya illinoinensis HOM05D001374 ORTHO05D004296 1.1e-42 176.8 105 79.0
MD13G1039800 Malus domestica HOM05D001374 ORTHO05D004296 1.4e-42 176.4 105 81.0
Manes.14G104300 Manihot esculenta HOM05D001374 ORTHO05D004296 1.9e-42 176.0 105 79.0
TAR371G0932 Trochodendron aralioides HOM05D001374 ORTHO05D004296 1.9e-42 176.0 104 79.8
GSVIVG01018308001 Vitis vinifera HOM05D001374 ORTHO05D004296 1.9e-42 176.0 105 79.0
MD16G1040700 Malus domestica HOM05D001374 ORTHO05D004296 2.5e-42 175.6 103 79.6
Solyc05g009220.3 Solanum lycopersicum HOM05D001374 ORTHO05D004296 2.5e-42 175.6 105 77.1
Sopen05g004940 Solanum pennellii HOM05D001374 ORTHO05D004296 2.5e-42 175.6 105 77.1
Cc11_g09920 Coffea canephora HOM05D001374 ORTHO05D004296 3.2e-42 175.3 105 77.1
DCAR_021035 Daucus carota HOM05D001374 ORTHO05D004296 4.2e-42 174.9 105 76.2
Dinv21063 Davidia involucrata HOM05D001374 ORTHO05D004296 4.2e-42 174.9 103 78.6
MELO3C023301.2 Cucumis melo HOM05D001374 ORTHO05D004296 5.5e-42 174.5 99 82.8
HPP92_021791 Vanilla planifolia HOM05D001374 ORTHO05D004296 5.5e-42 174.5 103 78.6
ClCG02G012120 Citrullus lanatus HOM05D001374 ORTHO05D004296 7.2e-42 174.1 99 81.8
Rhsim09G0106300 Rhododendron simsii HOM05D001374 ORTHO05D004296 7.2e-42 174.1 106 80.2
AUR62023655 Chenopodium quinoa HOM05D001374 ORTHO05D004296 9.4e-42 173.7 105 78.1
MELO3C020839.2 Cucumis melo HOM05D001374 ORTHO05D004296 9.4e-42 173.7 99 82.8
Dinv31622 Davidia involucrata HOM05D001374 ORTHO05D004296 9.4e-42 173.7 105 78.1
TAR371G0884 Trochodendron aralioides HOM05D001374 ORTHO05D004296 9.4e-42 173.7 104 78.8
ClCG11G004350 Citrullus lanatus HOM05D001374 ORTHO05D004296 1.2e-41 173.3 99 80.8
AUR62002537 Chenopodium quinoa HOM05D001374 ORTHO05D004296 1.6e-41 172.9 105 79.0
SEGI_13900 Sequoiadendron giganteum HOM05D001374 ORTHO05D004296 1.6e-41 172.9 101 77.2
Cpa.g.sc798.2 Carica papaya HOM05D001374 ORTHO05D004296 2.7e-41 172.2 103 75.7
CiPaw.06G018700 Carya illinoinensis HOM05D001374 ORTHO05D004296 2.7e-41 172.2 105 77.1
EL10Ac7g17806 Beta vulgaris HOM05D001374 ORTHO05D004296 4.7e-41 171.4 105 77.1
CsaV3_2G014770 Cucumis sativus L. HOM05D001374 ORTHO05D004296 4.7e-41 171.4 99 81.8
Ciclev10014320m.g Citrus clementina HOM05D001374 ORTHO05D004296 6.1e-41 171.0 105 77.1
Sed0001283 Sechium edule HOM05D001374 ORTHO05D004296 6.1e-41 171.0 99 79.8
VMungo0720G1962 Vigna mungo HOM05D001374 ORTHO05D004296 8.0e-41 170.6 105 76.2
Sc14g0007390 Simmondsia chinensis HOM05D001374 ORTHO05D004296 1.0e-40 170.2 101 77.2
TWI79G1774 Tripterygium wilfordii HOM05D001374 ORTHO05D004296 1.0e-40 170.2 105 75.2
CsaV3_2G016280 Cucumis sativus L. HOM05D001374 ORTHO05D004296 1.4e-40 169.9 99 78.8
DCAR_023648 Daucus carota HOM05D001374 ORTHO05D004296 1.4e-40 169.9 105 76.2
Glyma.10G272800 Glycine max HOM05D001374 ORTHO05D004296 1.4e-40 169.9 105 75.2
Glyma.20G117100 Glycine max HOM05D001374 ORTHO05D004296 1.4e-40 169.9 105 75.2
Haze_00619 Corylus avellana HOM05D001374 ORTHO05D004296 1.8e-40 169.5 105 76.2
HanXRQChr12g0371141 Helianthus annuus HOM05D001374 ORTHO05D004296 1.8e-40 169.5 105 76.2
Oeu059498.1 Olea europaea HOM05D001374 ORTHO05D004296 1.8e-40 169.5 101 78.2
Phvul.007G028800 Phaseolus vulgaris HOM05D001374 ORTHO05D004296 1.8e-40 169.5 105 75.2
PGR102G0253 Punica granatum HOM05D001374 ORTHO05D004296 2.3e-40 169.1 105 78.1
Thecc.07G144700 Theobroma cacao HOM05D001374 ORTHO05D004296 2.3e-40 169.1 105 75.2
EL10Ac6g14344 Beta vulgaris HOM05D001374 ORTHO05D004296 3.9e-40 168.3 105 76.2
Lalb_Chr02g0145891 Lupinus albus HOM05D001374 ORTHO05D004296 5.2e-40 167.9 105 75.2
Gohir.D05G323900 Gossypium hirsutum HOM05D001374 ORTHO05D004296 6.7e-40 167.5 105 76.2
Medtr1g110430 Medicago truncatula HOM05D001374 ORTHO05D004296 6.7e-40 167.5 105 75.2
unitig_24.g30583 Utricularia gibba HOM05D001374 ORTHO05D004296 6.7e-40 167.5 107 73.8
CANSAT56G0741 Cannabis sativa HOM05D001374 ORTHO05D004296 8.8e-40 167.2 105 74.3
Ca_11159_v3 Cicer arietinum L. HOM05D001374 ORTHO05D004296 1.1e-39 166.8 105 75.2
Lsat_1_v5_gn_2_80001 Lactuca sativa HOM05D001374 ORTHO05D004296 1.1e-39 166.8 101 79.2
Nitab4.5_0001616g0020 Nicotiana tabacum HOM05D001374 ORTHO05D004296 1.1e-39 166.8 134 63.4
Lsat_1_v5_gn_8_40760 Lactuca sativa HOM05D001374 ORTHO05D004296 1.5e-39 166.4 101 79.2
SalBow8G3975 Salvia bowleyana HOM05D001374 ORTHO05D004296 1.5e-39 166.4 105 75.2
THA.LOC104821915 Tarenaya hassleriana HOM05D001374 ORTHO05D004296 1.5e-39 166.4 103 73.8
unitig_22.g5575 Utricularia gibba HOM05D001374 ORTHO05D004296 1.5e-39 166.4 105 74.3
Gohir.A05G321600 Gossypium hirsutum HOM05D001374 ORTHO05D004296 2.0e-39 166.0 105 75.2
QL01p040852 Quercus lobata HOM05D001374 ORTHO05D004296 2.0e-39 166.0 103 77.7
Sed0019956 Sechium edule HOM05D001374 ORTHO05D004296 2.6e-39 165.6 99 77.8
arahy.Tifrunner.gnm1.ann1.DTRW9U Arachis hypogaea HOM05D001374 ORTHO05D004296 3.3e-39 165.2 105 74.3
arahy.Tifrunner.gnm1.ann1.VKD07K Arachis hypogaea HOM05D001374 ORTHO05D004296 3.3e-39 165.2 105 74.3
ECA233G2275 Erigeron canadensis HOM05D001374 ORTHO05D004296 3.3e-39 165.2 102 75.5
Aa31LG2G6960 Aethionema arabicum HOM05D001374 ORTHO05D004296 4.4e-39 164.9 105 73.3
Manes.06G066500 Manihot esculenta HOM05D001374 ORTHO05D004296 4.4e-39 164.9 105 76.2
Psat6g226160 Pisum sativum HOM05D001374 ORTHO05D004296 4.4e-39 164.9 105 75.2
Gorai.009G347600 Gossypium raimondii HOM05D001374 ORTHO05D004296 7.4e-39 164.1 105 75.2
HanXRQChr16g0508691 Helianthus annuus HOM05D001374 ORTHO05D004296 7.4e-39 164.1 101 76.2
Nitab4.5_0003867g0050 Nicotiana tabacum HOM05D001374 ORTHO05D004296 7.4e-39 164.1 134 62.7
Duzib248G1131 Durio zibethinus HOM05D001374 ORTHO05D004296 9.7e-39 163.7 105 73.3
FvH4_4g27080 Fragaria vesca HOM05D001374 ORTHO05D004296 9.7e-39 163.7 106 78.3
FAN12G2409 Fragaria x ananassa HOM05D001374 ORTHO05D004296 9.7e-39 163.7 106 78.3
FAN12G3668 Fragaria x ananassa HOM05D001374 ORTHO05D004296 9.7e-39 163.7 106 78.3
FAN17G1418 Fragaria x ananassa HOM05D001374 ORTHO05D004296 9.7e-39 163.7 106 78.3
Lj6C756T1 Lonicera japonica HOM05D001374 ORTHO05D004296 1.3e-38 163.3 104 74.0
Lj4g0028120 Lotus japonicus HOM05D001374 ORTHO05D004296 1.3e-38 163.3 105 74.3
Sabra08G0092800 Salix brachista HOM05D001374 ORTHO05D004296 1.3e-38 163.3 105 74.3
Cfa015867 Carpinus fangiana HOM05D001374 ORTHO05D004296 1.7e-38 162.9 105 73.3
COL.COLO4_07078 Corchorus olitorius HOM05D001374 ORTHO05D004296 2.8e-38 162.2 105 73.3
Eucgr.B03004 Eucalyptus grandis HOM05D001374 ORTHO05D004296 3.7e-38 161.8 106 76.4
FAN07G0461 Fragaria x ananassa HOM05D001374 ORTHO05D004296 3.7e-38 161.8 106 77.4
RcHm_v2.0_Chr6g0267171 Rosa chinensis HOM05D001374 ORTHO05D004296 3.7e-38 161.8 106 75.5
FAN22G1881 Fragaria x ananassa HOM05D001374 ORTHO05D004296 4.8e-38 161.4 106 77.4
Mapoly0039s0055 Marchantia polymorpha HOM05D001374 ORTHO05D004296 6.3e-38 161.0 101 73.3
Pp3c1_19680 Physcomitrium patens HOM05D001374 ORTHO05D004296 8.2e-38 160.6 99 74.7
Potri.008G122200 Populus trichocarpa HOM05D001374 ORTHO05D004296 8.2e-38 160.6 105 74.3
Lalb_Chr06g0166001 Lupinus albus HOM05D001374 ORTHO05D004296 1.1e-37 160.2 105 72.4
Migut.L01049 Erythranthe guttata HOM05D001374 ORTHO05D004296 1.4e-37 159.8 106 73.6
COL.COLO4_06769 Corchorus olitorius HOM05D001374 ORTHO05D004296 1.8e-37 159.5 105 72.4
RcHm_v2.0_Chr4g0434881 Rosa chinensis HOM05D001374 ORTHO05D004296 1.8e-37 159.5 106 75.5
Sabra10G0093000 Salix brachista HOM05D001374 ORTHO05D004296 7.0e-37 157.5 104 73.1
RcHm_v2.0_Chr1g0324801 Rosa chinensis HOM05D001374 ORTHO05D004296 9.1e-37 157.1 100 76.0
Duzib251G0305 Durio zibethinus HOM05D001374 ORTHO05D004296 1.2e-36 156.8 105 70.5
Atru.chr7.1031 Acer truncatum HOM05D001374 ORTHO05D004296 3.5e-36 155.2 105 71.4
A09p39220 Brassica napus HOM05D001374 ORTHO05D004296 7.7e-36 154.1 106 70.8
BraA09t39421Z Brassica rapa HOM05D001374 ORTHO05D004296 7.7e-36 154.1 106 70.8
Sp1g22870 Schrenkiella parvula HOM05D001374 ORTHO05D004296 1.0e-35 153.7 105 69.5
BcaC05g26679 Brassica carinata HOM05D001374 ORTHO05D004296 2.2e-35 152.5 106 69.8
Carub.0001s2516 Capsella rubella HOM05D001374 ORTHO05D004296 2.2e-35 152.5 106 69.8
BolC3t19594H Brassica oleracea HOM05D001374 ORTHO05D004296 3.8e-35 151.8 105 70.5
AL1G39980 Arabidopsis lyrata HOM05D001374 ORTHO05D004296 6.5e-35 151.0 106 69.8
AT1G25350 Arabidopsis thaliana HOM05D001374 ORTHO05D004296 6.5e-35 151.0 106 69.8
C05p25160 Brassica napus HOM05D001374 ORTHO05D004296 6.5e-35 151.0 106 68.9
Carub.0002s1482 Capsella rubella HOM05D001374 ORTHO05D004296 6.5e-35 151.0 103 66.0
TPR.G4913 Trifolium pratense HOM05D001374 ORTHO05D004296 6.5e-35 151.0 100 73.0
BcaC05g26473 Brassica carinata HOM05D001374 ORTHO05D004296 8.5e-35 150.6 104 69.2
BcaC01g01691 Brassica carinata HOM05D001374 ORTHO05D004296 1.5e-34 149.8 106 69.8
CARHR026140 Cardamine hirsuta HOM05D001374 ORTHO05D004296 1.5e-34 149.8 106 68.9
Carub.0003s3008 Capsella rubella HOM05D001374 ORTHO05D004296 2.5e-34 149.1 108 66.7
Thhalv10006840m.g Eutrema salsugineum HOM05D001374 ORTHO05D004296 2.5e-34 149.1 106 67.9
BolC5t31249H Brassica oleracea HOM05D001374 ORTHO05D004296 3.2e-34 148.7 106 68.9
vmacro10571 Vaccinium macrocarpon HOM05D001374 ORTHO05D004296 9.4e-34 147.1 105 69.5
C03p72940 Brassica napus HOM05D001374 ORTHO05D004296 1.2e-33 146.7 106 67.9
Nn5g28146 Nelumbo nucifera HOM05D001374 ORTHO05D004296 1.2e-33 146.7 87 78.2
Actinidia16665 Actinidia chinensis HOM05D001374 ORTHO05D004296 1.8e-32 142.9 105 67.6
SMO347G0322 Selaginella moellendorffii HOM05D001374 ORTHO05D004296 3.4e-31 138.7 100 66.0
AL6G31240 Arabidopsis lyrata HOM05D001374 ORTHO05D004296 9.7e-31 137.1 106 61.3
TAR374G1395 Trochodendron aralioides HOM05D001374 ORTHO05D004296 2.2e-30 136.0 76 81.6
BcaB03g12025 Brassica carinata HOM05D001374 ORTHO05D004296 2.4e-29 132.5 99 65.7
BcaB03g12026 Brassica carinata HOM05D001374 ORTHO05D004296 2.4e-29 132.5 99 65.7
SGA_v2.0_scaffold38G14957 Striga asiatica HOM05D001374 ORTHO05D004296 2.7e-28 129.0 106 64.2
BraA08t34642Z Brassica rapa HOM05D001374 ORTHO05D004296 1.0e-27 127.1 105 61.9
PRCOL_00001723 Prasinoderma coloniale HOM05D001374 ORTHO05D004296 9.4e-26 120.6 102 58.8
Atru.chr11.139 Acer truncatum HOM05D001374 ORTHO05D004296 1.2e-25 120.2 80 70.0
SMO361G0624 Selaginella moellendorffii HOM05D001374 ORTHO05D004296 1.2e-23 113.6 99 54.5
SMO361G0577 Selaginella moellendorffii HOM05D001374 ORTHO05D004296 3.4e-23 112.1 99 54.5
Cre14.g614900 Chlamydomonas reinhardtii HOM05D001374 ORTHO05D004296 4.4e-23 111.7 99 54.5
SGA_v2.0_scaffold32G13114 Striga asiatica HOM05D001374 ORTHO05D004296 7.5e-23 110.9 78 71.8
CARHR061010 Cardamine hirsuta HOM05D001374 ORTHO05D004296 1.4e-21 106.7 76 64.5
SHI32754 Sapria himalayana HOM05D001374 ORTHO05D004296 1.7e-19 99.8 67 64.2
A08p26960 Brassica napus HOM05D001374 ORTHO05D004296 2.3e-16 89.4 80 56.2
AT5G19720 Arabidopsis thaliana HOM05D001374 ORTHO05D004296 5.2e-16 88.2 106 46.2
AT1G68325 Arabidopsis thaliana HOM05D001374 ORTHO05D004296 6.8e-16 87.8 73 58.9
Nn4g23889 Nelumbo nucifera HOM05D001374 ORTHO05D004296 2.7e-12 75.9 52 71.2
MCO01G766 Micromonas commoda HOM05D001374 ORTHO05D004296 8.6e-11 70.9 148 36.5
DCAR_007251 Daucus carota HOM05D001374 ORTHO05D004296 9.5e-10 67.4 74 51.4
Peaxi162Scf00753g00332 Petunia axillaris HOM05D001374 ORTHO05D004296 1.4e-08 63.5 35 77.1
Haze_26608 Corylus avellana HOM05D001374 ORTHO05D004296 4.0e-08 62.0 93 40.9
Lalb_Chr21g0308841 Lupinus albus HOM05D001374 ORTHO05D004296 1.2e-07 60.5 77 45.5
SalBow8G5161 Salvia bowleyana HOM05D001374 ORTHO05D004296 1.7e-06 56.6 30 80.0


User provided reference genes

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