Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G1123 Ceratophyllum demersum HOM05D001007 ORTHO05D006705 2.7e-160 568.5 272 100.0
Haze_24239 Corylus avellana HOM05D001007 ORTHO05D006705 4.5e-91 338.6 260 59.2
MBI05_g03442_MAGBIO Magnolia biondii HOM05D001007 ORTHO05D006705 1.0e-90 337.4 268 60.1
TAR369G0542 Trochodendron aralioides HOM05D001007 ORTHO05D006705 2.2e-90 336.3 260 58.8
QL01p027375 Quercus lobata HOM05D001007 ORTHO05D006705 6.5e-90 334.7 260 58.8
Potri.009G041200 Populus trichocarpa HOM05D001007 ORTHO05D006705 2.5e-89 332.8 259 58.3
Cfa011634 Carpinus fangiana HOM05D001007 ORTHO05D006705 3.2e-89 332.4 260 58.1
Hma1.2p1_0227F.1_g096160 Hydrangea macrophylla HOM05D001007 ORTHO05D006705 3.2e-89 332.4 260 58.5
Nn2g11355 Nelumbo nucifera HOM05D001007 ORTHO05D006705 3.2e-89 332.4 260 60.8
CiPaw.13G082700 Carya illinoinensis HOM05D001007 ORTHO05D006705 1.2e-88 330.5 268 58.6
Sabra09G0029000 Salix brachista HOM05D001007 ORTHO05D006705 2.1e-88 329.7 259 57.9
Cpa.g.sc112.71 Carica papaya HOM05D001007 ORTHO05D006705 1.4e-87 327.0 260 57.7
CSS0032887 Camellia sinensis var. sinensis HOM05D001007 ORTHO05D006705 1.8e-87 326.6 267 56.2
Glyma.18G067400 Glycine max HOM05D001007 ORTHO05D006705 1.1e-86 323.9 268 58.2
GSVIVG01024808001 Vitis vinifera HOM05D001007 ORTHO05D006705 1.5e-86 323.6 268 56.3
vmacro02999 Vaccinium macrocarpon HOM05D001007 ORTHO05D006705 2.6e-86 322.8 260 58.1
MD03G1077900 Malus domestica HOM05D001007 ORTHO05D006705 3.3e-86 322.4 273 55.3
ClCG03G000980 Citrullus lanatus HOM05D001007 ORTHO05D006705 4.4e-86 322.0 272 56.6
Prupe.6G062900 Prunus persica HOM05D001007 ORTHO05D006705 5.7e-86 321.6 272 55.1
Atru.chr3.4061 Acer truncatum HOM05D001007 ORTHO05D006705 1.3e-85 320.5 269 56.1
Manes.01G165300 Manihot esculenta HOM05D001007 ORTHO05D006705 1.7e-85 320.1 260 57.7
CANSAT54G2449 Cannabis sativa HOM05D001007 ORTHO05D006705 3.7e-85 318.9 267 56.2
CsaV3_1G035960 Cucumis sativus L. HOM05D001007 ORTHO05D006705 4.8e-85 318.5 272 56.6
EL10Ac7g16109 Beta vulgaris HOM05D001007 ORTHO05D006705 1.1e-84 317.4 268 56.3
Ciclev10027687m.g Citrus clementina HOM05D001007 ORTHO05D006705 2.4e-84 316.2 270 56.7
Lalb_Chr20g0115061 Lupinus albus HOM05D001007 ORTHO05D006705 3.1e-84 315.8 268 56.0
AL5G26180 Arabidopsis lyrata HOM05D001007 ORTHO05D006705 4.1e-84 315.5 259 55.2
Phvul.006G063900 Phaseolus vulgaris HOM05D001007 ORTHO05D006705 4.1e-84 315.5 263 57.4
AT3G46960 Arabidopsis thaliana HOM05D001007 ORTHO05D006705 9.1e-84 314.3 259 54.4
Sed0027946 Sechium edule HOM05D001007 ORTHO05D006705 9.1e-84 314.3 270 55.9
AUR62001703 Chenopodium quinoa HOM05D001007 ORTHO05D006705 1.6e-83 313.5 270 55.9
MELO3C020571.2 Cucumis melo HOM05D001007 ORTHO05D006705 1.6e-83 313.5 271 56.5
FvH4_3g37880 Fragaria vesca HOM05D001007 ORTHO05D006705 1.6e-83 313.5 273 54.6
Lj2A1128G41 Lonicera japonica HOM05D001007 ORTHO05D006705 2.0e-83 313.2 268 55.2
THA.LOC104814901 Tarenaya hassleriana HOM05D001007 ORTHO05D006705 2.0e-83 313.2 259 56.4
VMungo0540G2128 Vigna mungo HOM05D001007 ORTHO05D006705 2.0e-83 313.2 263 57.0
TWI79G0297 Tripterygium wilfordii HOM05D001007 ORTHO05D006705 2.7e-83 312.8 260 55.8
MD11G1082500 Malus domestica HOM05D001007 ORTHO05D006705 5.9e-83 311.6 270 53.7
Actinidia25132 Actinidia chinensis HOM05D001007 ORTHO05D006705 1.3e-82 310.5 267 56.2
Aa31LG4G15900 Aethionema arabicum HOM05D001007 ORTHO05D006705 1.3e-82 310.5 259 54.4
COL.COLO4_19087 Corchorus olitorius HOM05D001007 ORTHO05D006705 1.7e-82 310.1 267 55.4
RcHm_v2.0_Chr5g0068091 Rosa chinensis HOM05D001007 ORTHO05D006705 1.7e-82 310.1 271 54.6
Oeu035015.2 Olea europaea HOM05D001007 ORTHO05D006705 2.9e-82 309.3 266 56.4
Carub.0005s1318 Capsella rubella HOM05D001007 ORTHO05D006705 3.8e-82 308.9 259 54.4
CARHR155590 Cardamine hirsuta HOM05D001007 ORTHO05D006705 3.8e-82 308.9 259 54.1
Duzib170G0956 Durio zibethinus HOM05D001007 ORTHO05D006705 3.8e-82 308.9 268 53.7
Gohir.A03G048400 Gossypium hirsutum HOM05D001007 ORTHO05D006705 1.1e-81 307.4 267 53.6
Ah.08g220450 Amaranthus hybridus HOM05D001007 ORTHO05D006705 1.5e-81 307.0 273 54.2
PGR102G0557 Punica granatum HOM05D001007 ORTHO05D006705 2.5e-81 306.2 261 55.6
Medtr3g462290 Medicago truncatula HOM05D001007 ORTHO05D006705 3.2e-81 305.8 267 55.8
Gohir.D03G118700 Gossypium hirsutum HOM05D001007 ORTHO05D006705 1.2e-80 303.9 267 53.2
Lj6g0017433 Lotus japonicus HOM05D001007 ORTHO05D006705 1.2e-80 303.9 266 54.5
Cc01_g13740 Coffea canephora HOM05D001007 ORTHO05D006705 1.6e-80 303.5 267 52.1
Thhalv10010069m.g Eutrema salsugineum HOM05D001007 ORTHO05D006705 1.6e-80 303.5 259 54.1
Gorai.003G125100 Gossypium raimondii HOM05D001007 ORTHO05D006705 1.6e-80 303.5 267 53.2
Lsat_1_v5_gn_4_65480 Lactuca sativa HOM05D001007 ORTHO05D006705 2.7e-80 302.8 268 56.7
Psat5g162480 Pisum sativum HOM05D001007 ORTHO05D006705 4.7e-80 302.0 266 54.5
Thecc.09G307300 Theobroma cacao HOM05D001007 ORTHO05D006705 1.0e-79 300.8 268 53.4
arahy.Tifrunner.gnm1.ann1.MGB2DA Arachis hypogaea HOM05D001007 ORTHO05D006705 2.3e-79 299.7 255 55.7
Sp5g14780 Schrenkiella parvula HOM05D001007 ORTHO05D006705 5.2e-79 298.5 266 52.6
PSO339G3632 Papaver somniferum HOM05D001007 ORTHO05D006705 6.8e-79 298.1 261 52.5
arahy.Tifrunner.gnm1.ann1.SSF8HC Arachis hypogaea HOM05D001007 ORTHO05D006705 1.2e-78 297.4 255 56.1
Rhsim13G0073900 Rhododendron simsii HOM05D001007 ORTHO05D006705 2.0e-78 296.6 279 54.5
Peaxi162Scf00842g00018 Petunia axillaris HOM05D001007 ORTHO05D006705 2.6e-78 296.2 267 52.4
PSO384G0462 Papaver somniferum HOM05D001007 ORTHO05D006705 4.4e-78 295.4 261 52.1
TPR.G30104 Trifolium pratense HOM05D001007 ORTHO05D006705 1.3e-77 293.9 266 52.3
CAN.G538.2 Capsicum annuum HOM05D001007 ORTHO05D006705 2.2e-77 293.1 268 52.2
Solyc06g005990.4 Solanum lycopersicum HOM05D001007 ORTHO05D006705 4.8e-77 292.0 268 51.1
FAN11G3969 Fragaria x ananassa HOM05D001007 ORTHO05D006705 1.1e-76 290.8 267 53.9
Sopen06g001970 Solanum pennellii HOM05D001007 ORTHO05D006705 1.4e-76 290.4 268 51.1
Eucgr.B02279 Eucalyptus grandis HOM05D001007 ORTHO05D006705 2.4e-76 289.7 259 53.7
FAN25G0707 Fragaria x ananassa HOM05D001007 ORTHO05D006705 2.4e-76 289.7 267 53.9
Migut.D00864 Erythranthe guttata HOM05D001007 ORTHO05D006705 9.1e-76 287.7 268 51.9
Aqoxy1G00722 Aquilegia oxysepala HOM05D001007 ORTHO05D006705 1.6e-75 287.0 260 50.0
MSTRG.18565 Avicennia marina HOM05D001007 ORTHO05D006705 4.5e-75 285.4 260 53.1
FAN21G1509 Fragaria x ananassa HOM05D001007 ORTHO05D006705 1.3e-74 283.9 260 53.8
DCAR_015644 Daucus carota HOM05D001007 ORTHO05D006705 1.7e-74 283.5 267 52.4
BraA06t25139Z Brassica rapa HOM05D001007 ORTHO05D006705 2.2e-74 283.1 259 51.4
A06p20600 Brassica napus HOM05D001007 ORTHO05D006705 8.5e-74 281.2 259 51.0
HanXRQChr10g0294221 Helianthus annuus HOM05D001007 ORTHO05D006705 9.4e-73 277.7 268 52.6
ATR0618G385 Amborella trichopoda HOM05D001007 ORTHO05D006705 1.6e-72 276.9 282 47.9
BolC3t19398H Brassica oleracea HOM05D001007 ORTHO05D006705 2.1e-72 276.6 261 51.0
SGA_v2.0_scaffold20G09308 Striga asiatica HOM05D001007 ORTHO05D006705 1.4e-71 273.9 260 50.4
C03p71130 Brassica napus HOM05D001007 ORTHO05D006705 2.6e-70 269.6 261 50.2
ECA234G1277 Erigeron canadensis HOM05D001007 ORTHO05D006705 6.3e-69 265.0 260 50.8
Sc12g0000990 Simmondsia chinensis HOM05D001007 ORTHO05D006705 7.7e-67 258.1 224 54.0
Ca_14897_v3 Cicer arietinum L. HOM05D001007 ORTHO05D006705 1.6e-64 250.4 267 48.7
Nitab4.5_0002405g0030 Nicotiana tabacum HOM05D001007 ORTHO05D006705 1.5e-62 243.8 222 51.8
Zm00001eb232660 Zea mays HOM05D001007 ORTHO05D006705 9.8e-54 214.5 265 41.9
SHI05888 Sapria himalayana HOM05D001007 ORTHO05D006705 6.4e-53 211.8 223 48.0
Mapoly0005s0056 Marchantia polymorpha HOM05D001007 ORTHO05D006705 1.2e-51 207.6 272 40.4
Pp3c20_11040 Physcomitrium patens HOM05D001007 ORTHO05D006705 1.3e-45 187.6 272 37.9
SMO364G0835 Selaginella moellendorffii HOM05D001007 ORTHO05D006705 7.8e-43 178.3 262 37.0
AagrBONN_evm.TU.Sc2ySwM_228.608 Anthoceros agrestis HOM05D001007 ORTHO05D006705 1.1e-41 174.5 281 33.8
HPP92_015336 Vanilla planifolia HOM05D001007 ORTHO05D023068 9.5e-41 171.4 134 58.2
HPP92_015299 Vanilla planifolia HOM05D001007 ORTHO05D023068 1.2e-40 171.0 134 58.2
Dinv28598 Davidia involucrata HOM05D001007 ORTHO05D006705 1.9e-36 157.1 148 49.3
CBR_g8252 Chara braunii HOM05D001007 ORTHO05D006705 2.3e-26 123.6 280 33.2
Nitab4.5_0000880g0030 Nicotiana tabacum HOM05D001007 ORTHO05D006705 3.8e-21 106.3 86 55.8
SEGI_29030 Sequoiadendron giganteum HOM05D001007 ORTHO05D006705 5.1e-18 95.9 85 50.6
unitig_0.g809 Utricularia gibba HOM05D001007 ORTHO05D023068 4.9e-13 79.3 217 26.7
SHI05887 Sapria himalayana HOM05D001007 ORTHO05D023068 4.8e-08 62.8 45 60.0
Peaxi162Scf00842g00017 Petunia axillaris HOM05D001007 ORTHO05D023068 2.0e-06 57.4 44 50.0


User provided reference genes

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