Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0952 Ceratophyllum demersum HOM05D001601 ORTHO05D002628 9.2e-87 323.6 167 100.0
CDE02G0907 Ceratophyllum demersum HOM05D001601 ORTHO05D002628 3.2e-39 165.6 266 45.5
MBI08_g34004_MAGBIO Magnolia biondii HOM05D001601 ORTHO05D002628 1.8e-21 106.7 254 35.8
MD10G1125700 Malus domestica HOM05D001601 ORTHO05D002628 5.3e-18 95.1 130 48.5
HPP92_012948 Vanilla planifolia HOM05D001601 ORTHO05D002628 2.9e-16 89.4 206 35.9
Aqoxy2G01591 Aquilegia oxysepala HOM05D001601 ORTHO05D002628 1.5e-15 87.0 249 31.3
TAR381G1205 Trochodendron aralioides HOM05D001601 ORTHO05D002628 2.5e-15 86.3 259 31.3
GSVIVG01013720001 Vitis vinifera HOM05D001601 ORTHO05D002628 3.2e-15 85.9 228 31.6
THA.LOC104819650 Tarenaya hassleriana HOM05D001601 ORTHO05D002628 5.5e-15 85.1 219 33.3
QL11p050977 Quercus lobata HOM05D001601 ORTHO05D002628 9.4e-15 84.3 241 32.0
Cfa005256 Carpinus fangiana HOM05D001601 ORTHO05D002628 1.6e-14 83.6 243 30.9
GSVIVG01024008001 Vitis vinifera HOM05D001601 ORTHO05D002628 3.6e-14 82.4 225 32.0
FAN20G1511 Fragaria x ananassa HOM05D001601 ORTHO05D002628 4.7e-14 82.0 201 35.3
AT2G16910 Arabidopsis thaliana HOM05D001601 ORTHO05D002628 2.3e-13 79.7 217 30.4
CARHR107200 Cardamine hirsuta HOM05D001601 ORTHO05D002628 2.3e-13 79.7 218 30.3
Carub.0003s3072 Capsella rubella HOM05D001601 ORTHO05D002628 3.0e-13 79.3 228 30.3
AL3G49670 Arabidopsis lyrata HOM05D001601 ORTHO05D002628 4.0e-13 79.0 218 30.3
Haze_02127 Corylus avellana HOM05D001601 ORTHO05D002628 4.0e-13 79.0 228 32.5
Glyma.20G107466 Glycine max HOM05D001601 ORTHO05D002628 4.0e-13 79.0 236 30.9
CiPaw.06G121200 Carya illinoinensis HOM05D001601 ORTHO05D002628 6.7e-13 78.2 257 30.4
Thhalv10022620m.g Eutrema salsugineum HOM05D001601 ORTHO05D002628 6.7e-13 78.2 211 29.9
CANSAT25G3111 Cannabis sativa HOM05D001601 ORTHO05D002628 8.8e-13 77.8 222 29.7
Gohir.A12G036800 Gossypium hirsutum HOM05D001601 ORTHO05D002628 8.8e-13 77.8 257 30.0
Dinv14116 Davidia involucrata HOM05D001601 ORTHO05D002628 1.2e-12 77.4 221 31.7
Gohir.D12G035600 Gossypium hirsutum HOM05D001601 ORTHO05D002628 1.2e-12 77.4 257 30.0
Gorai.008G036900 Gossypium raimondii HOM05D001601 ORTHO05D002628 1.2e-12 77.4 257 30.0
ECA234G0339 Erigeron canadensis HOM05D001601 ORTHO05D002628 1.5e-12 77.0 277 29.6
TPR.G2429 Trifolium pratense HOM05D001601 ORTHO05D002628 2.0e-12 76.6 207 31.4
BcaB03g16426 Brassica carinata HOM05D001601 ORTHO05D002628 4.4e-12 75.5 217 29.0
FvH4_2g15460 Fragaria vesca HOM05D001601 ORTHO05D002628 4.4e-12 75.5 259 31.7
Hma1.2p1_0032F.1_g019320 Hydrangea macrophylla HOM05D001601 ORTHO05D002628 4.4e-12 75.5 237 30.8
Nn3g19711 Nelumbo nucifera HOM05D001601 ORTHO05D002628 4.4e-12 75.5 268 28.7
ClCG02G004010 Citrullus lanatus HOM05D001601 ORTHO05D002628 5.7e-12 75.1 253 30.8
arahy.Tifrunner.gnm1.ann1.GJBP3C Arachis hypogaea HOM05D001601 ORTHO05D002628 7.5e-12 74.7 194 32.5
arahy.Tifrunner.gnm1.ann1.W4LCKL Arachis hypogaea HOM05D001601 ORTHO05D002628 7.5e-12 74.7 194 32.5
CsaV3_5G026500 Cucumis sativus L. HOM05D001601 ORTHO05D002628 9.7e-12 74.3 260 31.2
Psat6g232480 Pisum sativum HOM05D001601 ORTHO05D002628 9.7e-12 74.3 209 30.6
A07p04210 Brassica napus HOM05D001601 ORTHO05D002628 1.3e-11 73.9 211 29.4
BraA07t28212Z Brassica rapa HOM05D001601 ORTHO05D002628 1.3e-11 73.9 211 29.4
MELO3C021653.2 Cucumis melo HOM05D001601 ORTHO05D002628 1.3e-11 73.9 260 31.2
FAN24G0324 Fragaria x ananassa HOM05D001601 ORTHO05D002628 1.3e-11 73.9 259 31.3
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 1.3e-11 73.9 226 31.9
Lj5g0000172 Lotus japonicus HOM05D001601 ORTHO05D002628 1.3e-11 73.9 223 31.4
Lalb_Chr02g0143431 Lupinus albus HOM05D001601 ORTHO05D002628 1.3e-11 73.9 246 29.7
VMungo0720G1541 Vigna mungo HOM05D001601 ORTHO05D002628 1.7e-11 73.6 246 28.5
Aa31LG8G14100 Aethionema arabicum HOM05D001601 ORTHO05D002628 2.2e-11 73.2 214 29.9
Os02g0120500 Oryza sativa ssp. japonica HOM05D001601 ORTHO05D002628 2.2e-11 73.2 54 63.0
PSO170G4243 Papaver somniferum HOM05D001601 ORTHO05D002628 2.2e-11 73.2 61 59.0
PSO700G0026 Papaver somniferum HOM05D001601 ORTHO05D002628 2.2e-11 73.2 61 59.0
BcaB08g34676 Brassica carinata HOM05D001601 ORTHO05D002628 2.8e-11 72.8 209 29.2
BcaC01g02972 Brassica carinata HOM05D001601 ORTHO05D002628 2.8e-11 72.8 190 30.5
BcaC06g36193 Brassica carinata HOM05D001601 ORTHO05D002628 2.8e-11 72.8 211 29.4
A03p46130 Brassica napus HOM05D001601 ORTHO05D002628 2.8e-11 72.8 190 30.5
C03p57610 Brassica napus HOM05D001601 ORTHO05D002628 2.8e-11 72.8 190 30.5
C07p06690 Brassica napus HOM05D001601 ORTHO05D002628 2.8e-11 72.8 211 29.4
BolC7t41091H Brassica oleracea HOM05D001601 ORTHO05D002628 2.8e-11 72.8 211 29.4
BraA03t13741Z Brassica rapa HOM05D001601 ORTHO05D002628 2.8e-11 72.8 190 30.5
Potri.009G136300 Populus trichocarpa HOM05D001601 ORTHO05D002628 2.8e-11 72.8 219 30.6
Rhsim05G0054200 Rhododendron simsii HOM05D001601 ORTHO05D002628 2.8e-11 72.8 212 31.6
Manes.04G072000 Manihot esculenta HOM05D001601 ORTHO05D002628 3.7e-11 72.4 227 30.0
HanXRQChr03g0071131 Helianthus annuus HOM05D001601 ORTHO05D002628 4.8e-11 72.0 100 44.0
SMO266G0108 Selaginella moellendorffii HOM05D001601 ORTHO05D002628 4.8e-11 72.0 224 29.9
Glyma.10G281800 Glycine max HOM05D001601 ORTHO05D002628 6.3e-11 71.6 244 29.1
Duzib132G1094 Durio zibethinus HOM05D001601 ORTHO05D002628 1.1e-10 70.9 256 29.3
Lj9A394T44 Lonicera japonica HOM05D001601 ORTHO05D002628 1.1e-10 70.9 84 50.0
MD05G1122900 Malus domestica HOM05D001601 ORTHO05D002628 1.1e-10 70.9 251 28.7
Prupe.8G166900 Prunus persica HOM05D001601 ORTHO05D002628 1.1e-10 70.9 200 31.0
TAR625G1180 Trochodendron aralioides HOM05D001601 ORTHO05D002628 1.1e-10 70.9 225 30.7
RcHm_v2.0_Chr6g0278471 Rosa chinensis HOM05D001601 ORTHO05D002628 1.4e-10 70.5 86 47.7
BolC3t18036H Brassica oleracea HOM05D001601 ORTHO05D002628 1.8e-10 70.1 193 29.5
Ciclev10030105m.g Citrus clementina HOM05D001601 ORTHO05D002628 1.8e-10 70.1 67 56.7
Lsat_1_v5_gn_4_71800 Lactuca sativa HOM05D001601 ORTHO05D002628 2.4e-10 69.7 267 28.5
MD05G1123000 Malus domestica HOM05D001601 ORTHO05D002628 2.4e-10 69.7 209 29.7
Prupe.8G166800 Prunus persica HOM05D001601 ORTHO05D002628 2.4e-10 69.7 236 29.7
Rhsim05G0054400 Rhododendron simsii HOM05D001601 ORTHO05D002628 3.1e-10 69.3 202 30.7
Thecc.02G058200 Theobroma cacao HOM05D001601 ORTHO05D002628 3.1e-10 69.3 222 29.7
FvH4_2g15470 Fragaria vesca HOM05D001601 ORTHO05D002628 4.1e-10 68.9 51 62.7
FAN15G2735 Fragaria x ananassa HOM05D001601 ORTHO05D002628 4.1e-10 68.9 51 62.7
Sabra09G0105900 Salix brachista HOM05D001601 ORTHO05D002628 4.1e-10 68.9 226 29.2
Cc04_g12140 Coffea canephora HOM05D001601 ORTHO05D002628 1.2e-09 67.4 97 42.3
Sed0019722 Sechium edule HOM05D001601 ORTHO05D002628 1.6e-09 67.0 237 30.4
DCAR_004707 Daucus carota HOM05D001601 ORTHO05D002628 2.0e-09 66.6 139 37.4
DCAR_004708 Daucus carota HOM05D001601 ORTHO05D002628 2.0e-09 66.6 139 37.4
Pp3c26_4390 Physcomitrium patens HOM05D001601 ORTHO05D002628 2.0e-09 66.6 194 30.4
PGR042G3640 Punica granatum HOM05D001601 ORTHO05D002628 2.7e-09 66.2 228 29.4
Sp3g30190 Schrenkiella parvula HOM05D001601 ORTHO05D002628 2.7e-09 66.2 51 60.8
Aqoxy4G02705 Aquilegia oxysepala HOM05D001601 ORTHO05D002628 3.5e-09 65.9 70 48.6
Nitab4.5_0003730g0030 Nicotiana tabacum HOM05D001601 ORTHO05D002628 3.5e-09 65.9 94 44.7
TWI31G0590 Tripterygium wilfordii HOM05D001601 ORTHO05D002628 3.5e-09 65.9 253 28.1
Sopen08g018260 Solanum pennellii HOM05D001601 ORTHO05D002628 4.5e-09 65.5 78 48.7
PGSC0003DMG400008195 Solanum tuberosum HOM05D001601 ORTHO05D002628 4.5e-09 65.5 78 48.7
CAN.G432.3 Capsicum annuum HOM05D001601 ORTHO05D002628 5.9e-09 65.1 111 41.4
THA.LOC104819656 Tarenaya hassleriana HOM05D001601 ORTHO05D002628 5.9e-09 65.1 237 28.7
TWI75G1106 Tripterygium wilfordii HOM05D001601 ORTHO05D002628 1.3e-08 63.9 252 27.8
Atru.chr5.3376 Acer truncatum HOM05D001601 ORTHO05D002628 1.7e-08 63.5 251 28.3
Eucgr.G01783 Eucalyptus grandis HOM05D001601 ORTHO05D002628 2.2e-08 63.2 219 29.7
Nn6g34392 Nelumbo nucifera HOM05D001601 ORTHO05D002628 2.2e-08 63.2 50 62.0
Solyc08g062780.2 Solanum lycopersicum HOM05D001601 ORTHO05D002628 2.2e-08 63.2 79 46.8
MSTRG.16976 Avicennia marina HOM05D001601 ORTHO05D002628 2.9e-08 62.8 231 27.3
RcHm_v2.0_Chr6g0278441 Rosa chinensis HOM05D001601 ORTHO05D002628 2.9e-08 62.8 160 37.5
SEGI_08844 Sequoiadendron giganteum HOM05D001601 ORTHO05D002628 2.9e-08 62.8 116 39.7
AagrBONN_evm.TU.Sc2ySwM_362.2761 Anthoceros agrestis HOM05D000884 ORTHO05D002628 3.8e-08 62.4 48 72.9
Medtr1g112680 Medicago truncatula HOM05D001601 ORTHO05D002628 3.8e-08 62.4 51 70.6
Pp3c3_15850 Physcomitrium patens HOM05D001601 ORTHO05D002628 3.8e-08 62.4 194 28.9
SGA_v2.0_scaffold124G33644 Striga asiatica HOM05D001601 ORTHO05D002628 5.0e-08 62.0 68 48.5
Phvul.007G019000 Phaseolus vulgaris HOM05D001601 ORTHO05D002628 6.5e-08 61.6 223 26.9
unitig_26.g9753 Utricularia gibba HOM05D001601 ORTHO05D002628 8.5e-08 61.2 96 36.5
CiPaw.05G083200 Carya illinoinensis HOM05D001601 ORTHO05D002628 1.1e-07 60.8 100 44.0
Nitab4.5_0024162g0010 Nicotiana tabacum HOM05D001601 ORTHO05D002628 1.1e-07 60.8 56 53.6
Peaxi162Scf00070g00045 Petunia axillaris HOM05D001601 ORTHO05D002628 1.1e-07 60.8 87 41.4
Migut.B01188 Erythranthe guttata HOM05D001601 ORTHO05D002628 1.9e-07 60.1 242 26.4
Mapoly0054s0021 Marchantia polymorpha HOM05D000884 ORTHO05D006936 1.9e-07 60.1 68 58.8
Oeu015560.1 Olea europaea HOM05D001601 ORTHO05D002628 2.5e-07 59.7 126 34.1
CSS0049556 Camellia sinensis var. sinensis HOM05D001601 ORTHO05D002628 3.2e-07 59.3 67 47.8
AUR62013021 Chenopodium quinoa HOM05D001601 ORTHO05D002628 5.5e-07 58.5 67 49.3
AUR62010033 Chenopodium quinoa HOM05D001601 ORTHO05D002628 7.2e-07 58.2 67 49.3
EL10Ac9g21368 Beta vulgaris HOM05D001601 ORTHO05D002628 1.2e-06 57.4 77 46.8
Oeu015561.1 Olea europaea HOM05D001601 ORTHO05D002628 1.6e-06 57.0 156 31.4
Zm00001eb208200 Zea mays HOM05D001601 ORTHO05D002628 1.6e-06 57.0 51 52.9
ATR1155G019 Amborella trichopoda HOM05D001601 ORTHO05D002628 2.7e-06 56.2 59 59.3
TAR622G1239 Trochodendron aralioides HOM05D001601 ORTHO05D002628 3.6e-06 55.8 68 45.6
Peaxi162Scf00931g00515 Petunia axillaris HOM05D001601 ORTHO05D006936 4.7e-06 55.5 159 29.6
ATR0304G046 Amborella trichopoda HOM05D001601 ORTHO05D002628 8.0e-06 54.7 41 75.6
Ciclev10033497m.g Citrus clementina HOM05D000884 ORTHO05D002127 8.0e-06 54.7 76 39.5
COL.COLO4_17355 Corchorus olitorius HOM05D001601 ORTHO05D002628 8.0e-06 54.7 65 55.4
TAR628G0026 Trochodendron aralioides HOM05D001601 ORTHO05D002628 8.0e-06 54.7 50 52.0


User provided reference genes

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