Gene: Os02g0120500

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os02g0120500
  • Transcript Identifier Os02t0120500-01
  • Gene Type Coding gene
  • Location chr02 : 1073790-1076180 : negative

Gene Family Information

  • ID HOM05D001601
  • #Genes/#Species 402/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os02t0120500-01
  • MSU-ID LOC_Os02g02820.1
  • symbol TDR
  • symbol tdr
  • symbol bhlh5
  • symbol TDR1
  • symbol OsbHLH005
  • symbol OsbHLH5
  • name tapetum degeneration retardation
  • name basic helix loop helix 5
  • name basic/helix-loop-helix 5
  • uniprot Q6YUS3

Descriptions

  • Description Similar to Helix-loop-helix DNA-binding domain containing protein.
  • Description Basic helix-loop-helix (bHLH) transcription factor, Tapetum development and degeneration
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT2G16910
GO:0048658
ISO
PLAZA Integrative Orthologyanther wall tapetum development AT2G16910
GO:0006355
IBA
IC
GOA Databaseregulation of transcription, DNA-templated
GO:0048657
IMP
GOA Databaseanther wall tapetum cell differentiation
GO:0048654
IMP
GOA Databaseanther morphogenesis
GO:0048653
IMP
GOA Databaseanther development

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
GOA Databaseprotein binding
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT2G16910
GO:0000978
ISO
PLAZA Integrative OrthologyRNA polymerase II cis-regulatory region sequence-specific DNA binding AT2G16910
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
IBA
GOA DatabaseDNA-binding transcription factor activity
GO:0043565
IBA
GOA Databasesequence-specific DNA binding
GO:0003677
IMP
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
IBA
IC, IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)