Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0789 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 0.0e+00 2132.8 1150 100.0
CDE07G1198 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 0.0e+00 1181.4 1100 63.5
Aqoxy7G04079 Aquilegia oxysepala HOM05D001849 ORTHO05D004075 3.6e-174 616.7 1265 39.9
Potri.001G165800 Populus trichocarpa HOM05D001849 ORTHO05D004075 7.8e-161 572.4 1303 37.7
Hma1.2p1_0229F.1_g096780 Hydrangea macrophylla HOM05D001849 ORTHO05D004075 1.5e-159 568.2 1261 37.7
Sopen06g022460 Solanum pennellii HOM05D001849 ORTHO05D004075 8.1e-158 562.4 1302 37.2
Sabra01G0127500 Salix brachista HOM05D001849 ORTHO05D004075 1.4e-157 561.6 1283 38.0
Nn8g38564 Nelumbo nucifera HOM05D001849 ORTHO05D004075 1.8e-157 561.2 1333 36.4
CiPaw.01G215800 Carya illinoinensis HOM05D001849 ORTHO05D004075 9.0e-157 558.9 1311 38.6
DCAR_026425 Daucus carota HOM05D001849 ORTHO05D004075 4.5e-156 556.6 1282 37.8
TWI14G1157 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 8.4e-155 552.4 1255 37.2
CSS0036669 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 7.9e-153 545.8 1290 39.0
CSS0013236 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 1.0e-152 545.4 1289 38.9
MD09G1178000 Malus domestica HOM05D001849 ORTHO05D004075 9.6e-151 538.9 1309 36.2
Manes.04G148200 Manihot esculenta HOM05D001849 ORTHO05D004075 3.7e-150 537.0 1295 36.9
CAN.G1743.7 Capsicum annuum HOM05D001849 ORTHO05D004075 8.1e-150 535.8 1288 36.8
COL.COLO4_30798 Corchorus olitorius HOM05D001849 ORTHO05D004075 8.1e-150 535.8 1319 37.8
CiPaw.02G133700 Carya illinoinensis HOM05D001849 ORTHO05D004075 1.4e-149 535.0 1314 37.7
MD17G1148700 Malus domestica HOM05D001849 ORTHO05D004075 2.4e-149 534.3 1291 36.2
PSO724G0042 Papaver somniferum HOM05D001849 ORTHO05D004075 1.0e-147 528.9 1383 34.6
Ciclev10024725m.g Citrus clementina HOM05D001849 ORTHO05D004075 1.3e-147 528.5 1301 37.2
TWI59G0043 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 2.9e-147 527.3 1273 36.4
SalBow6G5403 Salvia bowleyana HOM05D001849 ORTHO05D004075 6.4e-147 526.2 1272 35.7
Thecc.06G125000 Theobroma cacao HOM05D001849 ORTHO05D004075 3.2e-146 523.9 1326 37.7
PSO386G0057 Papaver somniferum HOM05D001849 ORTHO05D004075 7.1e-146 522.7 1404 33.6
Nitab4.5_0002716g0060 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.3e-144 518.5 1123 36.8
Dinv37967 Davidia involucrata HOM05D001849 ORTHO05D004075 3.9e-144 516.9 1291 36.0
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 1.5e-143 515.0 1315 37.3
Prupe.3G037300 Prunus persica HOM05D001849 ORTHO05D004075 1.9e-143 514.6 1321 36.4
QL05p003642 Quercus lobata HOM05D001849 ORTHO05D004075 2.8e-142 510.8 1357 35.2
VMungo0331G0811 Vigna mungo HOM05D001849 ORTHO05D004075 8.2e-142 509.2 1255 36.3
Ca_23413_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004075 3.1e-141 507.3 1276 37.1
Lalb_Chr10g0101311 Lupinus albus HOM05D001849 ORTHO05D004075 4.0e-141 506.9 1263 37.5
Sed0014139 Sechium edule HOM05D001849 ORTHO05D004075 9.0e-141 505.8 1247 36.6
Medtr8g021980 Medicago truncatula HOM05D001849 ORTHO05D004075 1.2e-140 505.4 1276 36.8
CsaV3_7G034240 Cucumis sativus L. HOM05D001849 ORTHO05D004075 2.6e-140 504.2 1275 35.8
HPP92_011068 Vanilla planifolia HOM05D001849 ORTHO05D004075 1.0e-139 502.3 1274 36.4
Phvul.010G125600 Phaseolus vulgaris HOM05D001849 ORTHO05D004075 1.3e-139 501.9 1260 36.6
SalBow6G6581 Salvia bowleyana HOM05D001849 ORTHO05D004075 2.9e-139 500.7 1102 36.2
RcHm_v2.0_Chr2g0146441 Rosa chinensis HOM05D001849 ORTHO05D004075 6.5e-139 499.6 1312 35.1
Cfa003510 Carpinus fangiana HOM05D001849 ORTHO05D004075 3.2e-138 497.3 1244 35.9
Duzib192G0748 Durio zibethinus HOM05D001849 ORTHO05D004075 1.2e-137 495.4 1333 36.0
PGR102G3102 Punica granatum HOM05D001849 ORTHO05D004075 1.6e-137 495.0 1320 35.4
FvH4_6g35180 Fragaria vesca HOM05D001849 ORTHO05D004075 2.7e-137 494.2 1281 35.5
Lalb_Chr04g0253751 Lupinus albus HOM05D001849 ORTHO05D004075 6.1e-137 493.0 1251 36.3
CANSAT56G4149 Cannabis sativa HOM05D001849 ORTHO05D004075 1.0e-136 492.3 1273 37.0
Migut.I01106 Erythranthe guttata HOM05D001849 ORTHO05D004075 2.3e-136 491.1 1119 36.6
MBI19_g29883_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 3.0e-136 490.7 834 42.1
Gohir.A05G138700 Gossypium hirsutum HOM05D001849 ORTHO05D004075 2.5e-135 487.6 1314 36.5
Gorai.010G174200 Gossypium raimondii HOM05D001849 ORTHO05D004075 4.3e-135 486.9 1296 35.5
Psat4g166800 Pisum sativum HOM05D001849 ORTHO05D004075 9.7e-135 485.7 1269 36.6
FAN14G5889 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.3e-134 485.3 1302 35.3
Lj3g0013610 Lotus japonicus HOM05D001849 ORTHO05D004075 1.6e-134 485.0 1270 36.2
arahy.Tifrunner.gnm1.ann1.M8Z2DU Arachis hypogaea HOM05D001849 ORTHO05D004075 3.7e-134 483.8 1285 36.5
FAN02G1816 Fragaria x ananassa HOM05D001849 ORTHO05D004075 4.8e-134 483.4 1316 35.0
arahy.Tifrunner.gnm1.ann1.NEIN3W Arachis hypogaea HOM05D001849 ORTHO05D004075 1.1e-133 482.3 1285 36.3
Gohir.D06G149500 Gossypium hirsutum HOM05D001849 ORTHO05D004075 5.3e-133 479.9 1303 35.2
Glyma.07G042100 Glycine max HOM05D001849 ORTHO05D004075 6.9e-133 479.6 1297 34.7
Thhalv10018006m.g Eutrema salsugineum HOM05D001849 ORTHO05D004075 2.6e-132 477.6 1112 35.0
CARHR065290 Cardamine hirsuta HOM05D001849 ORTHO05D004075 5.9e-132 476.5 1119 35.0
EL10Ac7g16445 Beta vulgaris HOM05D001849 ORTHO05D004075 1.3e-131 475.3 1235 36.6
Cc04_g01030 Coffea canephora HOM05D001849 ORTHO05D004075 5.0e-131 473.4 1055 36.9
Glyma.16G010400 Glycine max HOM05D001849 ORTHO05D004075 1.1e-130 472.2 1272 35.4
Gorai.009G145100 Gossypium raimondii HOM05D001849 ORTHO05D004075 1.9e-130 471.5 1319 35.7
Sabra03G0040600 Salix brachista HOM05D001849 ORTHO05D004075 5.5e-130 469.9 1433 32.9
Gohir.D05G140900 Gossypium hirsutum HOM05D001849 ORTHO05D004075 7.2e-130 469.5 1297 35.8
MSTRG.22534 Avicennia marina HOM05D001849 ORTHO05D004075 7.9e-129 466.1 1244 35.1
FAN05G2069 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.8e-128 464.9 1326 34.0
Hund18671 Selenicereus undatus HOM05D001849 ORTHO05D004075 5.1e-128 463.4 1248 35.3
Duzib235G1365 Durio zibethinus HOM05D001849 ORTHO05D004075 1.1e-127 462.2 1313 35.6
Sc15g0000590 Simmondsia chinensis HOM05D001849 ORTHO05D004075 2.0e-127 461.5 1231 35.3
BraA07t31416Z Brassica rapa HOM05D001849 ORTHO05D004075 5.7e-127 459.9 1121 35.4
MELO3C024333.2 Cucumis melo HOM05D001849 ORTHO05D004075 5.7e-127 459.9 1289 34.4
A07p38580 Brassica napus HOM05D001849 ORTHO05D004075 4.8e-126 456.8 1118 35.4
ECA234G1749 Erigeron canadensis HOM05D001849 ORTHO05D004075 6.3e-126 456.4 1218 36.3
FAN09G3103 Fragaria x ananassa HOM05D001849 ORTHO05D004075 8.2e-126 456.1 1339 33.4
AL2G32060 Arabidopsis lyrata HOM05D001849 ORTHO05D004075 5.3e-125 453.4 1124 34.5
Lalb_Chr17g0343441 Lupinus albus HOM05D001849 ORTHO05D004075 3.4e-124 450.7 1249 35.1
Nitab4.5_0003137g0070 Nicotiana tabacum HOM05D001849 ORTHO05D004075 4.5e-124 450.3 1061 35.3
Potri.003G069200 Populus trichocarpa HOM05D001849 ORTHO05D004075 4.5e-124 450.3 1333 33.2
C06p46750 Brassica napus HOM05D001849 ORTHO05D004075 1.4e-122 445.3 1126 34.7
GSVIVG01016716001 Vitis vinifera HOM05D001849 ORTHO05D004075 1.4e-122 445.3 944 37.4
BolC6t39719H Brassica oleracea HOM05D001849 ORTHO05D004075 1.9e-122 444.9 1128 34.8
Dinv37845 Davidia involucrata HOM05D001849 ORTHO05D004075 3.2e-122 444.1 1201 35.4
AT1G72390 Arabidopsis thaliana HOM05D001849 ORTHO05D004075 5.5e-122 443.4 1300 33.7
Carub.0002s1924 Capsella rubella HOM05D001849 ORTHO05D004075 9.4e-122 442.6 1122 33.9
HanXRQChr12g0360181 Helianthus annuus HOM05D001849 ORTHO05D004075 2.7e-121 441.0 1099 35.1
Sp5g27470 Schrenkiella parvula HOM05D001849 ORTHO05D004075 6.1e-121 439.9 1215 33.6
THA.LOC104812264 Tarenaya hassleriana HOM05D001849 ORTHO05D004075 7.9e-121 439.5 1171 35.2
Solyc06g063010.4 Solanum lycopersicum HOM05D001849 ORTHO05D004075 1.8e-120 438.3 875 37.8
Lj9C535T9 Lonicera japonica HOM05D001849 ORTHO05D004075 1.1e-119 435.6 1346 33.4
TPR.G29998 Trifolium pratense HOM05D001849 ORTHO05D004075 1.5e-119 435.3 1258 34.9
Ah.15g095140 Amaranthus hybridus HOM05D001849 ORTHO05D004075 2.6e-119 434.5 1251 34.2
A02p17980 Brassica napus HOM05D001849 ORTHO05D004075 4.4e-119 433.7 1274 33.1
BcaB05g24751 Brassica carinata HOM05D001849 ORTHO05D004075 1.3e-118 432.2 1092 33.7
Aa31LG4G2730 Aethionema arabicum HOM05D001849 ORTHO05D004075 3.7e-118 430.6 1134 33.9
HanXRQChr10g0311861 Helianthus annuus HOM05D001849 ORTHO05D004075 2.4e-117 427.9 1238 35.5
AUR62009923 Chenopodium quinoa HOM05D001849 ORTHO05D004075 3.5e-116 424.1 1204 33.7
SGA_v2.0_scaffold71G23886 Striga asiatica HOM05D001849 ORTHO05D004075 3.5e-116 424.1 1234 34.2
BcaC03g15374 Brassica carinata HOM05D001849 ORTHO05D004075 4.5e-116 423.7 1272 32.5
C02p29880 Brassica napus HOM05D001849 ORTHO05D004075 4.5e-116 423.7 1272 32.5
BraA02t06845Z Brassica rapa HOM05D001849 ORTHO05D004075 5.9e-116 423.3 1283 32.7
BolC2t09038H Brassica oleracea HOM05D001849 ORTHO05D004075 3.8e-115 420.6 1274 32.7
unitig_747.g21722 Utricularia gibba HOM05D001849 ORTHO05D004075 1.1e-114 419.1 1257 32.3
Peaxi162Scf00207g01546 Petunia axillaris HOM05D001849 ORTHO05D004075 1.2e-113 415.6 835 37.4
Gohir.A06G143000 Gossypium hirsutum HOM05D001849 ORTHO05D004075 2.6e-108 397.9 1297 33.1
Oeu000390.1 Olea europaea HOM05D001849 ORTHO05D004075 3.5e-108 397.5 1174 32.1
PSO386G0247 Papaver somniferum HOM05D001849 ORTHO05D004075 5.9e-108 396.7 1258 32.9
TAR626G0481 Trochodendron aralioides HOM05D001849 ORTHO05D004075 8.5e-107 392.9 1073 36.1
Zm00001eb203360 Zea mays HOM05D001849 ORTHO05D004075 1.8e-104 385.2 1125 34.4
ClCG09G001150 Citrullus lanatus HOM05D001849 ORTHO05D004075 6.3e-102 376.7 1066 32.6
ATR0681G273 Amborella trichopoda HOM05D001849 ORTHO05D004075 4.5e-100 370.5 1121 32.3
Oeu011098.1 Olea europaea HOM05D001849 ORTHO05D004075 5.9e-100 370.2 760 36.8
Cpa.g.sc25.150 Carica papaya HOM05D001849 ORTHO05D004075 2.5e-98 364.8 1154 34.1
Atru.chr1.4088 Acer truncatum HOM05D001849 ORTHO05D004075 1.6e-97 362.1 701 38.4
TAR622G0522 Trochodendron aralioides HOM05D001849 ORTHO05D004075 6.1e-97 360.1 1211 32.4
Nitab4.5_0012739g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.2e-95 355.9 1081 31.1
AUR62001442 Chenopodium quinoa HOM05D001849 ORTHO05D004075 6.1e-89 333.6 1172 30.5
Manes.11G016300 Manihot esculenta HOM05D001849 ORTHO05D004075 1.7e-86 325.5 1073 31.8
Nn3g17987 Nelumbo nucifera HOM05D001849 ORTHO05D004075 6.6e-83 313.5 1220 30.4
Medtr5g009590 Medicago truncatula HOM05D001849 ORTHO05D004075 8.0e-81 306.6 933 32.4
PSO724G0283 Papaver somniferum HOM05D001849 ORTHO05D004075 2.3e-80 305.1 1196 30.4
BcaB03g14988 Brassica carinata HOM05D001849 ORTHO05D004075 3.9e-75 287.7 1077 29.7
Actinidia32208 Actinidia chinensis HOM05D001849 ORTHO05D004075 6.6e-75 287.0 1023 33.2
Nitab4.5_0004322g0020 Nicotiana tabacum HOM05D001849 ORTHO05D004075 2.6e-71 275.0 728 32.0
MBI16_g25623_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 3.3e-66 258.1 1248 28.5
Haze_16065 Corylus avellana HOM05D001849 ORTHO05D004075 6.2e-57 227.3 465 36.8
Actinidia32207 Actinidia chinensis HOM05D001849 ORTHO05D004075 1.3e-51 209.5 190 56.8
ECA247G2654 Erigeron canadensis HOM05D001849 ORTHO05D004075 2.1e-49 202.2 1063 27.1
SEGI_32525 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 4.8e-49 201.1 1276 27.8
QL01p003145 Quercus lobata HOM05D001849 ORTHO05D004075 1.1e-48 199.9 743 29.5
QL05p003384 Quercus lobata HOM05D001849 ORTHO05D004075 1.4e-48 199.5 886 31.0
Dinv16157 Davidia involucrata HOM05D001849 ORTHO05D004075 1.6e-44 186.0 1120 27.7
Psat5g189840 Pisum sativum HOM05D001849 ORTHO05D004075 4.3e-42 177.9 346 35.5
Psat5g189920 Pisum sativum HOM05D004963 ORTHO05D006638 3.6e-41 174.9 201 45.3
SEGI_18725 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 1.8e-40 172.6 1070 26.0
Actinidia14933 Actinidia chinensis HOM05D001849 ORTHO05D004075 6.9e-40 170.6 1188 26.3
Cfa015821 Carpinus fangiana HOM05D001849 ORTHO05D004075 6.4e-38 164.1 226 44.2
Atru.chr11.324 Acer truncatum HOM05D001849 ORTHO05D004075 9.3e-37 160.2 246 42.3
Lj6A751T55 Lonicera japonica HOM05D001849 ORTHO05D004075 1.2e-36 159.8 164 53.0
Haze_00674 Corylus avellana HOM05D001849 ORTHO05D004075 2.7e-36 158.7 448 32.1
Prupe.1G319400 Prunus persica HOM05D001849 ORTHO05D004075 2.7e-36 158.7 1187 27.4
CANSAT01G2891 Cannabis sativa HOM05D001849 ORTHO05D004075 6.7e-35 154.1 833 25.5
Rhsim09G0102300 Rhododendron simsii HOM05D001849 ORTHO05D004075 2.1e-33 149.1 959 27.0
HanXRQChr04g0094421 Helianthus annuus HOM05D001849 ORTHO05D004075 6.2e-33 147.5 176 45.5
TAR626G0936 Trochodendron aralioides HOM05D001849 ORTHO05D004075 6.2e-33 147.5 127 57.5
Pp3c13_8340 Physcomitrium patens HOM05D001849 ORTHO05D004075 1.2e-31 143.3 981 24.1
Dinv04913 Davidia involucrata HOM05D001849 ORTHO05D004075 1.5e-31 142.9 921 24.8
Pp3c3_3510 Physcomitrium patens HOM05D001849 ORTHO05D004075 1.3e-30 139.8 1241 23.3
vmacro15055 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 8.4e-30 137.1 127 52.8
Mapoly0055s0059 Marchantia polymorpha HOM05D001849 ORTHO05D004075 1.9e-29 136.0 948 23.8
AagrBONN_evm.TU.Sc2ySwM_344.4287 Anthoceros agrestis HOM05D001849 ORTHO05D004075 7.1e-29 134.0 177 41.8
CSS0014980 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 5.1e-27 127.9 702 24.9
CBR_g31688 Chara braunii HOM05D001849 ORTHO05D004075 1.3e-25 123.2 191 37.2
Psat4g083360 Pisum sativum HOM05D001061 ORTHO05D006881 2.8e-25 122.1 225 40.4
Medtr8g106435 Medicago truncatula HOM05D001849 ORTHO05D004075 3.7e-25 121.7 550 24.9
Lsat_1_v5_gn_1_37801 Lactuca sativa HOM05D001849 ORTHO05D004075 2.4e-24 119.0 230 34.8
CiPaw.05G244500 Carya illinoinensis HOM05D001849 ORTHO05D004075 3.1e-24 118.6 618 27.5
Haze_16071 Corylus avellana HOM05D001849 ORTHO05D004075 3.2e-21 108.6 346 32.4
BcaC03g15372 Brassica carinata HOM05D001849 ORTHO05D004075 2.7e-20 105.5 548 26.1
SHI29650 Sapria himalayana HOM05D001849 ORTHO05D004075 2.2e-14 85.9 138 34.8
SHI29648 Sapria himalayana HOM05D001849 ORTHO05D004075 5.0e-14 84.7 86 47.7
CDE07G0363 Ceratophyllum demersum HOM05D002703 ORTHO05D002921 1.4e-13 83.2 54 75.9
vmacro10614 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 2.7e-12 79.0 80 50.0
SHI29651 Sapria himalayana HOM05D001849 ORTHO05D004075 5.1e-11 74.7 429 31.2
Manes.14G108850 Manihot esculenta HOM05D001849 ORTHO05D004075 1.5e-10 73.2 1041 22.9
Medtr8g106415 Medicago truncatula HOM05D001849 ORTHO05D004075 2.0e-10 72.8 82 43.9
MCO11G122 Micromonas commoda HOM05D001849 ORTHO05D004075 9.7e-10 70.5 90 43.3
SEGI_02030 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 6.3e-09 67.8 52 63.5
SEGI_04298 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 6.3e-09 67.8 58 55.2
MBI19_g29884_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 8.2e-09 67.4 85 52.9
BcaB03g14986 Brassica carinata HOM05D001849 ORTHO05D004075 4.1e-08 65.1 76 39.5
Manes.06G063600 Manihot esculenta HOM05D001849 ORTHO05D004075 4.1e-08 65.1 68 51.5
Nitab4.5_0006425g0080 Nicotiana tabacum HOM05D001849 ORTHO05D004075 2.0e-07 62.8 361 28.3
Os10g0391100 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004075 2.2e-06 59.3 248 33.1


User provided reference genes

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