Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0691 Ceratophyllum demersum HOM05D000793 ORTHO05D017144 3.2e-139 498.4 257 100.0
CDE04G0840 Ceratophyllum demersum HOM05D000793 ORTHO05D000783 5.5e-107 391.3 262 79.8
TAR484G0001 Trochodendron aralioides HOM05D000793 ORTHO05D017144 2.1e-45 186.8 189 58.7
TAR629G1707 Trochodendron aralioides HOM05D000793 ORTHO05D000783 2.1e-45 186.8 189 58.7
MBI14_g15140_MAGBIO Magnolia biondii HOM05D000793 ORTHO05D000783 3.9e-44 182.6 155 60.6
RcHm_v2.0_Chr2g0170301 Rosa chinensis HOM05D000793 ORTHO05D000783 5.6e-43 178.7 143 64.3
Haze_14624 Corylus avellana HOM05D000793 ORTHO05D000783 7.4e-43 178.3 146 64.4
CiPaw.03G034100 Carya illinoinensis HOM05D000793 ORTHO05D000783 1.3e-42 177.6 145 65.5
CAN.G206.62 Capsicum annuum HOM05D000793 ORTHO05D000783 1.6e-42 177.2 150 64.0
Cfa007473 Carpinus fangiana HOM05D000793 ORTHO05D000783 1.6e-42 177.2 173 56.6
Solyc02g087250.4 Solanum lycopersicum HOM05D000793 ORTHO05D000783 2.1e-42 176.8 159 57.9
FAN05G3418 Fragaria x ananassa HOM05D000793 ORTHO05D000783 2.8e-42 176.4 144 63.9
FAN14G1704 Fragaria x ananassa HOM05D000793 ORTHO05D000783 2.8e-42 176.4 144 63.9
arahy.Tifrunner.gnm1.ann1.WN4T5U Arachis hypogaea HOM05D000793 ORTHO05D000783 6.2e-42 175.3 231 49.4
Prupe.3G278400 Prunus persica HOM05D000793 ORTHO05D000783 6.2e-42 175.3 161 58.4
FAN02G0334 Fragaria x ananassa HOM05D000793 ORTHO05D000783 8.2e-42 174.9 144 63.2
FvH4_6g50050 Fragaria vesca HOM05D000793 ORTHO05D000783 1.4e-41 174.1 144 63.2
Sopen02g031990 Solanum pennellii HOM05D000793 ORTHO05D000783 1.4e-41 174.1 159 57.2
Nitab4.5_0007185g0050 Nicotiana tabacum HOM05D000793 ORTHO05D000783 1.8e-41 173.7 146 62.3
arahy.Tifrunner.gnm1.ann1.JVCB1P Arachis hypogaea HOM05D000793 ORTHO05D000783 2.4e-41 173.3 228 48.2
Eucgr.I01877 Eucalyptus grandis HOM05D000793 ORTHO05D000783 3.1e-41 172.9 227 48.0
ClCG10G014560 Citrullus lanatus HOM05D000793 ORTHO05D000783 4.0e-41 172.6 160 59.4
PGSC0003DMG400001391 Solanum tuberosum HOM05D000793 ORTHO05D000783 4.0e-41 172.6 147 62.6
Oeu047337.2 Olea europaea HOM05D000793 ORTHO05D000783 5.3e-41 172.2 168 57.1
QL02p078191 Quercus lobata HOM05D000793 ORTHO05D000783 5.3e-41 172.2 135 66.7
QL93p0205_0125 Quercus lobata HOM05D000793 ORTHO05D000783 5.3e-41 172.2 135 66.7
AUR62013340 Chenopodium quinoa HOM05D000793 ORTHO05D000783 2.0e-40 170.2 164 54.9
Thecc.04G002900 Theobroma cacao HOM05D000793 ORTHO05D000783 2.0e-40 170.2 250 43.2
ATR0624G084 Amborella trichopoda HOM05D000793 ORTHO05D000783 2.6e-40 169.9 149 63.8
COL.COLO4_06153 Corchorus olitorius HOM05D000793 ORTHO05D000783 4.5e-40 169.1 185 51.9
Gohir.A09G024400 Gossypium hirsutum HOM05D000793 ORTHO05D000783 7.6e-40 168.3 222 47.7
Peaxi162Scf00129g00828 Petunia axillaris HOM05D000793 ORTHO05D000783 7.6e-40 168.3 146 61.6
Dinv33675 Davidia involucrata HOM05D000793 ORTHO05D000783 1.0e-39 167.9 142 64.1
Manes.17G119900 Manihot esculenta HOM05D000793 ORTHO05D000783 1.0e-39 167.9 164 56.1
Gorai.006G027700 Gossypium raimondii HOM05D000793 ORTHO05D000783 1.3e-39 167.5 203 48.8
Sed0002278 Sechium edule HOM05D000793 ORTHO05D000783 1.3e-39 167.5 132 64.4
MD17G1040600 Malus domestica HOM05D000793 ORTHO05D000783 2.2e-39 166.8 209 48.8
EL10Ac8g18678 Beta vulgaris HOM05D000793 ORTHO05D000783 2.9e-39 166.4 138 60.9
TWI12G1092 Tripterygium wilfordii HOM05D000793 ORTHO05D000783 2.9e-39 166.4 185 53.5
Hma1.2p1_0697F.1_g205060 Hydrangea macrophylla HOM05D000793 ORTHO05D000783 8.4e-39 164.9 250 46.4
MELO3C009922.2 Cucumis melo HOM05D000793 ORTHO05D000783 1.1e-38 164.5 129 63.6
Gohir.D09G023600 Gossypium hirsutum HOM05D000793 ORTHO05D000783 1.1e-38 164.5 205 47.8
CsaV3_3G042020 Cucumis sativus L. HOM05D000793 ORTHO05D000783 1.4e-38 164.1 129 65.1
Lj2g0022012 Lotus japonicus HOM05D000793 ORTHO05D000783 1.4e-38 164.1 135 60.0
Ah.09g226400 Amaranthus hybridus HOM05D000793 ORTHO05D000783 1.9e-38 163.7 197 49.2
Ciclev10013715m.g Citrus clementina HOM05D000793 ORTHO05D000783 1.9e-38 163.7 148 61.5
Nitab4.5_0004905g0030 Nicotiana tabacum HOM05D000793 ORTHO05D006792 1.9e-38 163.7 141 60.3
Sc18g0000520 Simmondsia chinensis HOM05D000793 ORTHO05D000783 2.5e-38 163.3 136 60.3
RhsimUnG0168000 Rhododendron simsii HOM05D000793 ORTHO05D000783 3.2e-38 162.9 197 52.3
Nn3g17015 Nelumbo nucifera HOM05D000793 ORTHO05D000783 4.2e-38 162.5 256 43.0
Aqoxy3G00884 Aquilegia oxysepala HOM05D000793 ORTHO05D000783 5.5e-38 162.2 138 63.8
Lj7A408G13 Lonicera japonica HOM05D000793 ORTHO05D000783 5.5e-38 162.2 188 51.1
AUR62011146 Chenopodium quinoa HOM05D000793 ORTHO05D000783 7.1e-38 161.8 173 52.0
Lsat_1_v5_gn_0_16540 Lactuca sativa HOM05D000793 ORTHO05D000783 9.3e-38 161.4 216 48.1
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 1.2e-37 161.0 134 64.2
Glyma.19G014000 Glycine max HOM05D000793 ORTHO05D000783 1.2e-37 161.0 137 63.5
Atru.chr8.2412 Acer truncatum HOM05D000793 ORTHO05D017144 2.1e-37 160.2 156 57.7
CSS0007180 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 3.5e-37 159.5 194 50.5
Migut.H00160 Erythranthe guttata HOM05D000793 ORTHO05D000783 3.5e-37 159.5 143 58.7
PGR142G1623 Punica granatum HOM05D000793 ORTHO05D000783 3.5e-37 159.5 206 46.1
vmacro05789 Vaccinium macrocarpon HOM05D000793 ORTHO05D000783 3.5e-37 159.5 197 50.3
Actinidia06043 Actinidia chinensis HOM05D000793 ORTHO05D000783 4.6e-37 159.1 148 60.1
Ca_04228_v3 Cicer arietinum L. HOM05D000793 ORTHO05D000783 4.6e-37 159.1 200 47.0
Hund26520 Selenicereus undatus HOM05D000793 ORTHO05D000783 4.6e-37 159.1 146 58.9
PSO478G2034 Papaver somniferum HOM05D000793 ORTHO05D000783 6.0e-37 158.7 230 44.8
Lalb_Chr06g0176481 Lupinus albus HOM05D000793 ORTHO05D000783 1.3e-36 157.5 180 50.0
Rhsim10G0028400 Rhododendron simsii HOM05D000793 ORTHO05D017144 1.3e-36 157.5 196 51.0
Cpa.g.sc14.82 Carica papaya HOM05D000793 ORTHO05D000783 1.8e-36 157.1 189 48.1
CSS0044382 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 5.1e-36 155.6 203 49.3
Potri.001G350801 Populus trichocarpa HOM05D000793 ORTHO05D000783 5.1e-36 155.6 206 45.6
Zm00001eb424430 Zea mays HOM05D000793 ORTHO05D000783 6.7e-36 155.2 155 54.8
Zm00001eb424440 Zea mays HOM05D000793 ORTHO05D000783 6.7e-36 155.2 155 54.8
DCAR_001431 Daucus carota HOM05D000793 ORTHO05D000783 8.7e-36 154.8 160 55.0
Phvul.004G020800 Phaseolus vulgaris HOM05D000793 ORTHO05D000783 1.9e-35 153.7 131 60.3
CARHR075610 Cardamine hirsuta HOM05D000793 ORTHO05D000783 4.3e-35 152.5 138 58.0
GSVIVG01032542001 Vitis vinifera HOM05D000793 ORTHO05D000783 7.4e-35 151.8 95 78.9
Carub.0003s0072 Capsella rubella HOM05D000793 ORTHO05D000783 4.8e-34 149.1 138 56.5
THA.LOC104821060 Tarenaya hassleriana HOM05D000793 ORTHO05D000783 6.3e-34 148.7 141 54.6
VMungo0464G0194 Vigna mungo HOM05D000793 ORTHO05D000783 8.2e-34 148.3 131 59.5
Cc07_g02650 Coffea canephora HOM05D000793 ORTHO05D000783 2.4e-33 146.7 166 54.8
AL3G10840 Arabidopsis lyrata HOM05D000793 ORTHO05D000783 3.1e-33 146.4 136 55.9
Sp3g00700 Schrenkiella parvula HOM05D000793 ORTHO05D000783 3.1e-33 146.4 139 58.3
BcaC05g30465 Brassica carinata HOM05D000793 ORTHO05D000783 5.3e-33 145.6 141 56.0
A05p44610 Brassica napus HOM05D000793 ORTHO05D000783 6.9e-33 145.2 141 56.0
BraA05t23195Z Brassica rapa HOM05D000793 ORTHO05D000783 6.9e-33 145.2 141 56.0
Thhalv10019986m.g Eutrema salsugineum HOM05D000793 ORTHO05D000783 9.0e-33 144.8 139 56.8
C09p75200 Brassica napus HOM05D000793 ORTHO05D000783 1.5e-32 144.1 140 55.7
Psat1g079880 Pisum sativum HOM05D000793 ORTHO05D000783 3.4e-32 142.9 141 55.3
AT3G01370 Arabidopsis thaliana HOM05D000793 ORTHO05D000783 5.9e-32 142.1 264 39.0
TPR.G31462 Trifolium pratense HOM05D000793 ORTHO05D000783 1.3e-31 141.0 131 54.2
BcaNung07362 Brassica carinata HOM05D000793 ORTHO05D017144 3.8e-31 139.4 257 41.2
SalBow1G7326 Salvia bowleyana HOM05D000793 ORTHO05D000783 3.8e-31 139.4 156 47.4
BolC5t35144H Brassica oleracea HOM05D000793 ORTHO05D000783 8.5e-31 138.3 260 41.2
Medtr6g008410 Medicago truncatula HOM05D000793 ORTHO05D000783 1.4e-30 137.5 189 42.3
Aa31LG5G10490 Aethionema arabicum HOM05D000793 ORTHO05D000783 1.9e-30 137.1 255 37.6
SEGI_32454 Sequoiadendron giganteum HOM05D000793 ORTHO05D000783 4.2e-30 136.0 254 35.8
Dinv35019 Davidia involucrata HOM05D000793 ORTHO05D000783 1.2e-29 134.4 167 50.3
SGA_v2.0_scaffold135G34834 Striga asiatica HOM05D000793 ORTHO05D000783 2.7e-29 133.3 155 50.3
Glyma.19G014100 Glycine max HOM05D000793 ORTHO05D000783 3.9e-28 129.4 131 51.9
Rhsim10G0028200 Rhododendron simsii HOM05D000793 ORTHO05D017144 1.3e-26 124.4 177 46.9
Phvul.004G020900 Phaseolus vulgaris HOM05D000793 ORTHO05D000783 1.8e-25 120.6 137 47.4
Rhsim10G0028300 Rhododendron simsii HOM05D000793 ORTHO05D017144 4.1e-25 119.4 122 57.4
SEGI_20678 Sequoiadendron giganteum HOM05D000793 ORTHO05D000783 1.6e-21 107.5 199 37.7
Pp3c7_23880 Physcomitrium patens HOM05D000793 ORTHO05D000783 6.1e-21 105.5 140 43.6
HanXRQChr15g0474401 Helianthus annuus HOM05D000793 ORTHO05D000783 1.0e-20 104.8 157 45.2
unitig_744.g24347 Utricularia gibba HOM05D000793 ORTHO05D000783 2.2e-18 97.1 68 66.2
Mapoly0006s0098 Marchantia polymorpha HOM05D000793 ORTHO05D000783 3.4e-16 89.7 80 52.5
CDE06G0910 Ceratophyllum demersum HOM05D000793 ORTHO05D129224 7.2e-14 82.0 49 87.8
Rhsim10G0028500 Rhododendron simsii HOM05D000793 ORTHO05D017144 3.0e-12 76.6 210 36.7
HPP92_010836 Vanilla planifolia HOM05D000793 ORTHO05D000783 8.8e-12 75.1 64 59.4
Pp3c13_17270 Physcomitrium patens HOM05D000793 ORTHO05D000783 5.7e-11 72.4 193 29.5
Pp3c12_15870 Physcomitrium patens HOM05D000793 ORTHO05D000783 2.2e-10 70.5 183 30.1
MD09G1040000 Malus domestica HOM05D000793 ORTHO05D017144 3.7e-10 69.7 45 66.7
VMungo1215G1993 Vigna mungo HOM05D000793 ORTHO05D000783 1.3e-07 61.2 161 33.5


User provided reference genes

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