Gene: Pp3c12_15870

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c12_15870
  • Transcript Identifier Pp3c12_15870V3.5
  • Gene Type Coding gene
  • Location Chr12 : 10549839-10556728 : negative

Gene Family Information

  • ID HOM05D000793
  • #Genes/#Species 746/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c12_15870V3.5
  • pacid 32972310
  • alias Pp1s70_29V6
  • alias Phypa_10953
  • alias Phpat.012G058900
  • uniprot A0A2K1JR01

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000373
ISO
PLAZA Integrative OrthologyGroup II intron splicing Zm00001eb114780
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT3G18390
GO:0000372
ISO
PLAZA Integrative OrthologyGroup I intron splicing AT3G01370
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT4G14510

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Zm00001eb424440
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G14510

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast Zm00001eb114780
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion Zm00001eb114780
GO:0009532
ISO
PLAZA Integrative Orthologyplastid stroma AT3G01370

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035920 YhbY-like superfamily
IPR001890 RNA-binding, CRM domain
Mapman id Description
16.11.4.1.2 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.splicing factor (CFM2)