Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0566 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 4.3e-80 301.2 146 100.0
GSVIVG01023249001 Vitis vinifera HOM05D007027 ORTHO05D008765 2.0e-37 159.5 139 58.3
MD08G1241400 Malus domestica HOM05D007027 ORTHO05D008765 3.4e-37 158.7 136 61.0
TAR381G1092 Trochodendron aralioides HOM05D007027 ORTHO05D008765 4.5e-37 158.3 136 61.0
Duzib132G0056 Durio zibethinus HOM05D007027 ORTHO05D008765 1.3e-36 156.8 136 59.6
Sp1g08410 Schrenkiella parvula HOM05D007027 ORTHO05D008765 1.3e-36 156.8 136 57.4
VMungo0540G1081 Vigna mungo HOM05D007027 ORTHO05D008765 2.2e-36 156.0 137 60.6
Aqoxy3G00475 Aquilegia oxysepala HOM05D007027 ORTHO05D008765 5.0e-36 154.8 136 58.8
Cpa.g.sc113.45 Carica papaya HOM05D007027 ORTHO05D008765 1.1e-35 153.7 137 59.9
MD15G1435400 Malus domestica HOM05D007027 ORTHO05D008765 1.1e-35 153.7 136 60.3
Gohir.D01G174800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 1.9e-35 152.9 138 57.2
AT1G09800 Arabidopsis thaliana HOM05D007027 ORTHO05D008765 2.5e-35 152.5 136 54.4
CiPaw.05G004800 Carya illinoinensis HOM05D007027 ORTHO05D008765 2.5e-35 152.5 136 60.3
Lj6g0019688 Lotus japonicus HOM05D007027 ORTHO05D008765 2.5e-35 152.5 137 59.1
Lj6g0023928 Lotus japonicus HOM05D007027 ORTHO05D008765 2.5e-35 152.5 137 59.1
Manes.07G024000 Manihot esculenta HOM05D007027 ORTHO05D008765 3.2e-35 152.1 138 60.1
Nn5g27423 Nelumbo nucifera HOM05D007027 ORTHO05D008765 4.2e-35 151.8 137 59.9
BcaC05g24848 Brassica carinata HOM05D007027 ORTHO05D008765 5.5e-35 151.4 136 57.4
PGR142G1179 Punica granatum HOM05D007027 ORTHO05D008765 5.5e-35 151.4 140 58.6
Glyma.12G167000 Glycine max HOM05D007027 ORTHO05D008765 7.2e-35 151.0 141 57.4
Nitab4.5_0004106g0030 Nicotiana tabacum HOM05D007027 ORTHO05D008765 7.2e-35 151.0 136 58.1
Thhalv10007981m.g Eutrema salsugineum HOM05D007027 ORTHO05D008765 9.4e-35 150.6 136 57.4
CAN.G855.3 Capsicum annuum HOM05D007027 ORTHO05D008765 1.2e-34 150.2 141 58.9
Nitab4.5_0000787g0210 Nicotiana tabacum HOM05D007027 ORTHO05D008765 1.6e-34 149.8 136 56.6
PSO017G0894 Papaver somniferum HOM05D007027 ORTHO05D008765 1.6e-34 149.8 141 56.0
THA.LOC104816809 Tarenaya hassleriana HOM05D007027 ORTHO05D008765 1.6e-34 149.8 136 55.9
Dinv07482 Davidia involucrata HOM05D007027 ORTHO05D008765 2.7e-34 149.1 141 56.7
Gohir.A01G183800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 2.7e-34 149.1 151 54.3
AUR62043952 Chenopodium quinoa HOM05D007027 ORTHO05D008765 3.6e-34 148.7 136 58.8
ATR1136G089 Amborella trichopoda HOM05D007027 ORTHO05D008765 4.6e-34 148.3 136 58.1
A09p65310 Brassica napus HOM05D007027 ORTHO05D008765 4.6e-34 148.3 137 56.2
FAN11G0675 Fragaria x ananassa HOM05D007027 ORTHO05D008765 4.6e-34 148.3 137 59.1
Gorai.002G216900 Gossypium raimondii HOM05D007027 ORTHO05D008765 4.6e-34 148.3 138 55.8
PGSC0003DMG400024892 Solanum tuberosum HOM05D007027 ORTHO05D008765 4.6e-34 148.3 141 58.2
PSO170G1275 Papaver somniferum HOM05D007027 ORTHO05D008765 7.9e-34 147.5 142 54.9
Potri.003G008500 Populus trichocarpa HOM05D007027 ORTHO05D008765 1.0e-33 147.1 140 57.1
RcHm_v2.0_Chr5g0060601 Rosa chinensis HOM05D007027 ORTHO05D008765 1.0e-33 147.1 138 58.0
Solyc01g103560.3 Solanum lycopersicum HOM05D007027 ORTHO05D008765 1.0e-33 147.1 140 57.1
C08p49260 Brassica napus HOM05D007027 ORTHO05D008765 1.4e-33 146.7 137 54.0
BolC8t52461H Brassica oleracea HOM05D007027 ORTHO05D008765 1.4e-33 146.7 137 54.0
FAN25G1584 Fragaria x ananassa HOM05D007027 ORTHO05D008765 1.4e-33 146.7 136 58.8
Glyma.16G003100 Glycine max HOM05D007027 ORTHO05D008765 1.4e-33 146.7 137 58.4
Sabra03G0004200 Salix brachista HOM05D007027 ORTHO05D008765 1.8e-33 146.4 149 54.4
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 3.0e-33 145.6 136 55.1
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 3.0e-33 145.6 136 55.1
Cfa004487 Carpinus fangiana HOM05D007027 ORTHO05D008765 3.0e-33 145.6 137 56.9
CiPaw.06G173600 Carya illinoinensis HOM05D007027 ORTHO05D008765 3.0e-33 145.6 137 57.7
FvH4_3g33250 Fragaria vesca HOM05D007027 ORTHO05D008765 3.0e-33 145.6 136 58.8
FAN16G3401 Fragaria x ananassa HOM05D007027 ORTHO05D008765 3.9e-33 145.2 136 58.1
BcaC07g41859 Brassica carinata HOM05D007027 ORTHO05D008765 5.1e-33 144.8 136 53.7
CSS0028981 Camellia sinensis var. sinensis HOM05D007027 ORTHO05D008765 5.1e-33 144.8 141 56.0
Psat1g222360 Pisum sativum HOM05D007027 ORTHO05D008765 5.1e-33 144.8 137 57.7
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 6.7e-33 144.4 136 55.1
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 6.7e-33 144.4 136 55.1
CARHR009790 Cardamine hirsuta HOM05D007027 ORTHO05D008765 6.7e-33 144.4 140 54.3
AUR62028254 Chenopodium quinoa HOM05D007027 ORTHO05D008765 6.7e-33 144.4 136 55.9
Haze_10044 Corylus avellana HOM05D007027 ORTHO05D008765 6.7e-33 144.4 137 56.9
CANSAT54G3047 Cannabis sativa HOM05D007027 ORTHO05D008765 8.8e-33 144.1 136 55.9
Sopen01g045910 Solanum pennellii HOM05D007027 ORTHO05D008765 8.8e-33 144.1 140 56.4
QL02p100436 Quercus lobata HOM05D007027 ORTHO05D008765 1.1e-32 143.7 140 57.1
Prupe.1G579000 Prunus persica HOM05D007027 ORTHO05D008765 1.9e-32 142.9 139 57.6
SalBow7G1849 Salvia bowleyana HOM05D007027 ORTHO05D008765 1.9e-32 142.9 139 56.8
TPR.G2122 Trifolium pratense HOM05D007027 ORTHO05D008765 1.9e-32 142.9 137 56.9
Carub.0001s0916 Capsella rubella HOM05D007027 ORTHO05D008765 4.3e-32 141.7 136 55.1
Ca_00043_v3 Cicer arietinum L. HOM05D007027 ORTHO05D008765 5.7e-32 141.4 137 56.9
Cc02_g23170 Coffea canephora HOM05D007027 ORTHO05D008765 5.7e-32 141.4 136 56.6
Medtr2g005830 Medicago truncatula HOM05D007027 ORTHO05D008765 5.7e-32 141.4 137 56.2
Actinidia00176 Actinidia chinensis HOM05D007027 ORTHO05D008765 9.7e-32 140.6 141 52.5
MBI03_g18680_MAGBIO Magnolia biondii HOM05D007027 ORTHO05D008765 9.7e-32 140.6 158 51.3
SGA_v2.0_scaffold304G47919 Striga asiatica HOM05D007027 ORTHO05D008765 2.2e-31 139.4 141 53.9
Migut.B00775 Erythranthe guttata HOM05D007027 ORTHO05D008765 2.8e-31 139.0 136 54.4
HanXRQChr09g0249131 Helianthus annuus HOM05D007027 ORTHO05D008765 2.8e-31 139.0 136 53.7
EL10Ac6g14111 Beta vulgaris HOM05D007027 ORTHO05D008765 4.8e-31 138.3 138 55.8
Lalb_Chr20g0123691 Lupinus albus HOM05D007027 ORTHO05D008765 4.8e-31 138.3 147 53.7
arahy.Tifrunner.gnm1.ann1.3G44QY Arachis hypogaea HOM05D007027 ORTHO05D008765 6.3e-31 137.9 140 55.7
Rhsim11G0122600 Rhododendron simsii HOM05D007027 ORTHO05D008765 1.1e-30 137.1 147 53.1
arahy.Tifrunner.gnm1.ann1.BAUB6M Arachis hypogaea HOM05D007027 ORTHO05D008765 1.4e-30 136.7 140 55.0
MELO3C011820.2 Cucumis melo HOM05D007027 ORTHO05D008765 1.4e-30 136.7 140 52.1
Ciclev10001491m.g Citrus clementina HOM05D007027 ORTHO05D008765 2.4e-30 136.0 136 57.4
AL1G20380 Arabidopsis lyrata HOM05D007027 ORTHO05D008765 3.1e-30 135.6 166 44.6
CsaV3_5G029790 Cucumis sativus L. HOM05D007027 ORTHO05D008765 3.1e-30 135.6 136 52.9
DCAR_006671 Daucus carota HOM05D007027 ORTHO05D008765 6.9e-30 134.4 138 52.2
Hund15459 Selenicereus undatus HOM05D007027 ORTHO05D008765 3.4e-29 132.1 136 55.1
Atru.chr6.497 Acer truncatum HOM05D007027 ORTHO05D008765 1.0e-28 130.6 136 52.2
Zm00001eb138750 Zea mays HOM05D007027 ORTHO05D008765 5.0e-28 128.3 143 49.7
Os12g0194800 Oryza sativa ssp. japonica HOM05D007027 ORTHO05D008765 1.1e-27 127.1 136 50.7
vmacro01711 Vaccinium macrocarpon HOM05D007027 ORTHO05D008765 1.1e-27 127.1 176 44.9
ECA233G3768 Erigeron canadensis HOM05D007027 ORTHO05D008765 3.2e-27 125.6 136 49.3
HPP92_013442 Vanilla planifolia HOM05D007027 ORTHO05D008765 7.2e-27 124.4 136 51.5
unitig_699.g19848 Utricularia gibba HOM05D007027 ORTHO05D008765 2.7e-26 122.5 136 50.0
Lj5C266T4 Lonicera japonica HOM05D007027 ORTHO05D008765 6.1e-26 121.3 136 50.0
Oeu064602.3 Olea europaea HOM05D007027 ORTHO05D008765 1.4e-25 120.2 179 45.8
COL.COLO4_17723 Corchorus olitorius HOM05D007027 ORTHO05D008765 1.8e-25 119.8 127 54.3
Pp3c1_13020 Physcomitrium patens HOM05D007027 ORTHO05D008765 1.8e-25 119.8 138 52.2
Mapoly0016s0042 Marchantia polymorpha HOM05D007027 ORTHO05D008765 1.7e-23 113.2 136 47.1
Eucgr.I02764 Eucalyptus grandis HOM05D007027 ORTHO05D008765 1.1e-22 110.5 117 52.1
FAN21G1550 Fragaria x ananassa HOM05D007027 ORTHO05D008765 4.1e-22 108.6 114 53.5
Sed0027668 Sechium edule HOM05D007027 ORTHO05D008765 4.1e-22 108.6 116 47.4
TWI23G0132 Tripterygium wilfordii HOM05D007027 ORTHO05D008765 7.0e-22 107.8 133 50.4
Thecc.02G018500 Theobroma cacao HOM05D007027 ORTHO05D008765 2.9e-20 102.4 136 44.9
Sc07g0005100 Simmondsia chinensis HOM05D007027 ORTHO05D008765 5.0e-20 101.7 116 51.7
Peaxi162Scf00011g01224 Petunia axillaris HOM05D007027 ORTHO05D008765 2.5e-19 99.4 144 45.1
SMO118G0354 Selaginella moellendorffii HOM05D007027 ORTHO05D008765 2.7e-18 95.9 136 43.4
Phvul.006G218900 Phaseolus vulgaris HOM05D007027 ORTHO05D008765 1.4e-14 83.6 51 74.5
MCO02G420 Micromonas commoda HOM05D007027 ORTHO05D008765 1.1e-11 73.9 146 37.0
ClCG11G013270 Citrullus lanatus HOM05D007027 ORTHO05D008765 4.7e-10 68.6 115 39.1
CBR_g30061 Chara braunii HOM05D007027 ORTHO05D008765 2.6e-08 62.8 39 69.2


User provided reference genes

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