Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0047 Ceratophyllum demersum HOM05D001601 ORTHO05D006936 5.1e-57 224.2 112 100.0
CDE02G4468 Ceratophyllum demersum HOM05D001601 ORTHO05D006936 1.3e-41 172.9 93 89.2
CDE05G2176 Ceratophyllum demersum HOM05D001601 ORTHO05D006936 1.1e-11 73.6 36 97.2
Hma1.2p1_0809F.1_g221820 Hydrangea macrophylla HOM05D001601 ORTHO05D006936 1.6e-10 69.7 91 37.4
Potri.009G136300 Populus trichocarpa HOM05D001601 ORTHO05D002628 4.7e-10 68.2 84 38.1
Manes.04G072000 Manihot esculenta HOM05D001601 ORTHO05D002628 8.0e-10 67.4 99 35.4
Aqoxy2G01591 Aquilegia oxysepala HOM05D001601 ORTHO05D002628 1.4e-09 66.6 101 37.6
Aqoxy4G02705 Aquilegia oxysepala HOM05D001601 ORTHO05D002628 1.4e-09 66.6 101 37.6
Hma1.2p1_0032F.1_g019320 Hydrangea macrophylla HOM05D001601 ORTHO05D002628 1.4e-09 66.6 95 35.8
Peaxi162Scf00070g00045 Petunia axillaris HOM05D001601 ORTHO05D002628 1.4e-09 66.6 97 35.1
Rhsim05G0054400 Rhododendron simsii HOM05D001601 ORTHO05D002628 1.4e-09 66.6 96 34.4
ClCG02G004010 Citrullus lanatus HOM05D001601 ORTHO05D002628 2.3e-09 65.9 97 36.1
MBI08_g34004_MAGBIO Magnolia biondii HOM05D001601 ORTHO05D002628 2.3e-09 65.9 106 35.8
Cfa000292 Carpinus fangiana HOM05D001601 ORTHO05D006936 3.0e-09 65.5 92 38.0
MELO3C021653.2 Cucumis melo HOM05D001601 ORTHO05D002628 3.0e-09 65.5 97 37.1
Nitab4.5_0003347g0100 Nicotiana tabacum HOM05D000055 ORTHO05D002202 4.0e-09 65.1 80 40.0
Aqoxy4G01891 Aquilegia oxysepala HOM05D001601 ORTHO05D006936 5.2e-09 64.7 88 35.2
Eucgr.G01783 Eucalyptus grandis HOM05D001601 ORTHO05D002628 5.2e-09 64.7 87 36.8
Lsat_1_v5_gn_7_18580 Lactuca sativa HOM05D001601 ORTHO05D006936 5.2e-09 64.7 79 43.0
Cpa.g.sc871.3 Carica papaya HOM05D001601 ORTHO05D006936 6.8e-09 64.3 95 41.1
CiPaw.06G121200 Carya illinoinensis HOM05D001601 ORTHO05D002628 6.8e-09 64.3 79 38.0
CsaV3_5G026500 Cucumis sativus L. HOM05D001601 ORTHO05D002628 6.8e-09 64.3 79 40.5
Nitab4.5_0003045g0030 Nicotiana tabacum HOM05D001601 ORTHO05D006936 6.8e-09 64.3 91 35.2
Nitab4.5_0012549g0030 Nicotiana tabacum HOM05D001601 ORTHO05D006936 6.8e-09 64.3 91 36.3
Cfa005256 Carpinus fangiana HOM05D001601 ORTHO05D002628 8.8e-09 63.9 79 36.7
Haze_06641 Corylus avellana HOM05D001601 ORTHO05D006936 8.8e-09 63.9 93 36.6
Haze_06652 Corylus avellana HOM05D001601 ORTHO05D006936 8.8e-09 63.9 93 36.6
DCAR_004707 Daucus carota HOM05D001601 ORTHO05D002628 8.8e-09 63.9 86 39.5
DCAR_004708 Daucus carota HOM05D001601 ORTHO05D002628 8.8e-09 63.9 86 39.5
GSVIVG01013720001 Vitis vinifera HOM05D001601 ORTHO05D002628 8.8e-09 63.9 79 38.0
GSVIVG01024008001 Vitis vinifera HOM05D001601 ORTHO05D002628 8.8e-09 63.9 96 33.3
Atru.chr5.3376 Acer truncatum HOM05D001601 ORTHO05D002628 1.2e-08 63.5 79 36.7
Ciclev10030105m.g Citrus clementina HOM05D001601 ORTHO05D002628 1.2e-08 63.5 92 35.9
Sopen02g024580 Solanum pennellii HOM05D001601 ORTHO05D006936 1.2e-08 63.5 91 35.2
Sed0019722 Sechium edule HOM05D001601 ORTHO05D002628 1.5e-08 63.2 97 35.1
Solyc02g079810.3 Solanum lycopersicum HOM05D001601 ORTHO05D006936 2.0e-08 62.8 89 36.0
CSS0013390 Camellia sinensis var. sinensis HOM05D001601 ORTHO05D006936 2.6e-08 62.4 92 32.6
Dinv14116 Davidia involucrata HOM05D001601 ORTHO05D002628 2.6e-08 62.4 107 35.5
Medtr4g091990 Medicago truncatula HOM05D001601 ORTHO05D006936 2.6e-08 62.4 85 37.6
PGR004G1615 Punica granatum HOM05D001601 ORTHO05D006936 3.4e-08 62.0 91 35.2
QL11p050977 Quercus lobata HOM05D001601 ORTHO05D002628 3.4e-08 62.0 95 33.7
THA.LOC104819650 Tarenaya hassleriana HOM05D001601 ORTHO05D002628 3.4e-08 62.0 84 34.5
TWI75G1106 Tripterygium wilfordii HOM05D001601 ORTHO05D002628 3.4e-08 62.0 95 35.8
A07p04210 Brassica napus HOM05D001601 ORTHO05D002628 4.4e-08 61.6 84 32.1
Migut.B01188 Erythranthe guttata HOM05D001601 ORTHO05D002628 4.4e-08 61.6 96 34.4
THA.LOC104819656 Tarenaya hassleriana HOM05D001601 ORTHO05D002628 4.4e-08 61.6 85 36.5
Thecc.02G058200 Theobroma cacao HOM05D001601 ORTHO05D002628 4.4e-08 61.6 79 36.7
BraA07t28212Z Brassica rapa HOM05D001601 ORTHO05D002628 5.7e-08 61.2 84 32.1
CAN.G424.87 Capsicum annuum HOM05D001601 ORTHO05D006936 5.7e-08 61.2 80 37.5
Glyma.20G107466 Glycine max HOM05D001601 ORTHO05D002628 5.7e-08 61.2 91 33.0
Gohir.D12G035600 Gossypium hirsutum HOM05D001601 ORTHO05D002628 5.7e-08 61.2 79 35.4
Gorai.008G036900 Gossypium raimondii HOM05D001601 ORTHO05D002628 5.7e-08 61.2 79 35.4
HanXRQChr03g0071131 Helianthus annuus HOM05D001601 ORTHO05D002628 5.7e-08 61.2 91 35.2
Lj9A394T44 Lonicera japonica HOM05D001601 ORTHO05D002628 5.7e-08 61.2 88 35.2
PGR004G1446 Punica granatum HOM05D001601 ORTHO05D006936 5.7e-08 61.2 91 36.3
Sabra09G0105900 Salix brachista HOM05D001601 ORTHO05D002628 5.7e-08 61.2 84 35.7
TAR622G1239 Trochodendron aralioides HOM05D001601 ORTHO05D002628 5.7e-08 61.2 77 41.6
CiPaw.09G153700 Carya illinoinensis HOM05D001601 ORTHO05D006936 7.5e-08 60.8 96 33.3
COL.COLO4_31670 Corchorus olitorius HOM05D001601 ORTHO05D006936 7.5e-08 60.8 101 30.7
Duzib132G1094 Durio zibethinus HOM05D001601 ORTHO05D002628 7.5e-08 60.8 81 35.8
FvH4_2g15460 Fragaria vesca HOM05D001601 ORTHO05D002628 7.5e-08 60.8 100 31.0
Gohir.A12G036800 Gossypium hirsutum HOM05D001601 ORTHO05D002628 7.5e-08 60.8 79 35.4
Nitab4.5_0003730g0030 Nicotiana tabacum HOM05D001601 ORTHO05D002628 7.5e-08 60.8 113 30.1
PGSC0003DMG400008195 Solanum tuberosum HOM05D001601 ORTHO05D002628 7.5e-08 60.8 79 35.4
TAR625G1180 Trochodendron aralioides HOM05D001601 ORTHO05D002628 9.8e-08 60.5 87 35.6
BcaC06g36193 Brassica carinata HOM05D001601 ORTHO05D002628 1.3e-07 60.1 84 32.1
C07p06690 Brassica napus HOM05D001601 ORTHO05D002628 1.3e-07 60.1 84 32.1
BolC7t41091H Brassica oleracea HOM05D001601 ORTHO05D002628 1.3e-07 60.1 84 32.1
Cfa009154 Carpinus fangiana HOM05D001601 ORTHO05D002628 1.3e-07 60.1 94 36.2
Rhsim05G0054200 Rhododendron simsii HOM05D001601 ORTHO05D002628 1.3e-07 60.1 84 34.5
CAN.G432.3 Capsicum annuum HOM05D001601 ORTHO05D002628 1.7e-07 59.7 79 34.2
FAN24G0324 Fragaria x ananassa HOM05D001601 ORTHO05D002628 1.7e-07 59.7 100 31.0
RcHm_v2.0_Chr6g0278441 Rosa chinensis HOM05D001601 ORTHO05D002628 1.7e-07 59.7 100 31.0
TAR381G1205 Trochodendron aralioides HOM05D001601 ORTHO05D002628 1.7e-07 59.7 99 32.3
BcaB08g34676 Brassica carinata HOM05D001601 ORTHO05D002628 2.2e-07 59.3 84 31.0
RcHm_v2.0_Chr5g0004791 Rosa chinensis HOM05D001601 ORTHO05D006936 2.2e-07 59.3 92 34.8
TWI31G0590 Tripterygium wilfordii HOM05D001601 ORTHO05D002628 2.2e-07 59.3 95 32.6
BcaB03g16426 Brassica carinata HOM05D001601 ORTHO05D002628 2.8e-07 58.9 84 31.0
BcaC01g02972 Brassica carinata HOM05D001601 ORTHO05D002628 2.8e-07 58.9 84 31.0
A03p46130 Brassica napus HOM05D001601 ORTHO05D002628 2.8e-07 58.9 84 31.0
C03p57610 Brassica napus HOM05D001601 ORTHO05D002628 2.8e-07 58.9 84 31.0
BraA03t13741Z Brassica rapa HOM05D001601 ORTHO05D002628 2.8e-07 58.9 84 31.0
Medtr1g112680 Medicago truncatula HOM05D001601 ORTHO05D002628 2.8e-07 58.9 83 33.7
Sopen08g018260 Solanum pennellii HOM05D001601 ORTHO05D002628 2.8e-07 58.9 79 34.2
FvH4_2g15470 Fragaria vesca HOM05D001601 ORTHO05D002628 3.7e-07 58.5 79 35.4
FvH4_3g03170 Fragaria vesca HOM05D001601 ORTHO05D006936 3.7e-07 58.5 92 33.7
FAN15G2735 Fragaria x ananassa HOM05D001601 ORTHO05D002628 3.7e-07 58.5 79 35.4
FAN20G1511 Fragaria x ananassa HOM05D001601 ORTHO05D002628 3.7e-07 58.5 79 35.4
RcHm_v2.0_Chr6g0278471 Rosa chinensis HOM05D001601 ORTHO05D002628 3.7e-07 58.5 79 34.2
Aa31LG8G14100 Aethionema arabicum HOM05D001601 ORTHO05D002628 4.8e-07 58.2 84 32.1
BolC3t18036H Brassica oleracea HOM05D001601 ORTHO05D002628 4.8e-07 58.2 81 32.1
Lj5g0000172 Lotus japonicus HOM05D001601 ORTHO05D002628 4.8e-07 58.2 91 33.0
Prupe.8G166900 Prunus persica HOM05D001601 ORTHO05D002628 4.8e-07 58.2 79 35.4
PGR042G3640 Punica granatum HOM05D001601 ORTHO05D002628 4.8e-07 58.2 97 30.9
CDE02G0907 Ceratophyllum demersum HOM05D001601 ORTHO05D002628 6.3e-07 57.8 95 35.8
Cc04_g12140 Coffea canephora HOM05D001601 ORTHO05D002628 6.3e-07 57.8 88 33.0
SGA_v2.0_scaffold124G33644 Striga asiatica HOM05D001601 ORTHO05D002628 6.3e-07 57.8 90 32.2
arahy.Tifrunner.gnm1.ann1.W4LCKL Arachis hypogaea HOM05D001601 ORTHO05D002628 8.3e-07 57.4 102 32.4
MSTRG.16976 Avicennia marina HOM05D001601 ORTHO05D002628 8.3e-07 57.4 93 32.3
ECA234G0339 Erigeron canadensis HOM05D001601 ORTHO05D002628 8.3e-07 57.4 91 33.0
Glyma.10G281800 Glycine max HOM05D001601 ORTHO05D002628 8.3e-07 57.4 91 31.9
Lsat_1_v5_gn_4_71800 Lactuca sativa HOM05D001601 ORTHO05D002628 8.3e-07 57.4 91 34.1
PSO170G4243 Papaver somniferum HOM05D001601 ORTHO05D002628 8.3e-07 57.4 96 32.3
PSO700G0026 Papaver somniferum HOM05D001601 ORTHO05D002628 8.3e-07 57.4 96 32.3
Prupe.4G030600 Prunus persica HOM05D001601 ORTHO05D006936 8.3e-07 57.4 91 31.9
Sp3g30190 Schrenkiella parvula HOM05D001601 ORTHO05D002628 8.3e-07 57.4 84 31.0
TAR628G0026 Trochodendron aralioides HOM05D001601 ORTHO05D002628 8.3e-07 57.4 82 31.7
arahy.Tifrunner.gnm1.ann1.GJBP3C Arachis hypogaea HOM05D001601 ORTHO05D002628 1.1e-06 57.0 79 35.4
AUR62010033 Chenopodium quinoa HOM05D001601 ORTHO05D002628 1.1e-06 57.0 107 28.0
AUR62013021 Chenopodium quinoa HOM05D001601 ORTHO05D002628 1.1e-06 57.0 83 31.3
Peaxi162Scf00003g01722 Petunia axillaris HOM05D001601 ORTHO05D006936 1.1e-06 57.0 82 35.4
HanXRQChr05g0130851 Helianthus annuus HOM05D001601 ORTHO05D006936 1.4e-06 56.6 92 32.6
Lalb_Chr02g0143431 Lupinus albus HOM05D001601 ORTHO05D002628 1.4e-06 56.6 89 32.6
FAN21G1209 Fragaria x ananassa HOM05D001601 ORTHO05D006936 1.8e-06 56.2 90 33.3
Lj4g0026669 Lotus japonicus HOM05D001601 ORTHO05D006936 1.8e-06 56.2 91 30.8
Psat6g232480 Pisum sativum HOM05D001601 ORTHO05D002628 1.8e-06 56.2 91 33.0
Solyc08g062780.2 Solanum lycopersicum HOM05D001601 ORTHO05D002628 1.8e-06 56.2 80 35.0
Thhalv10022620m.g Eutrema salsugineum HOM05D001601 ORTHO05D002628 2.4e-06 55.8 84 29.8
MD05G1122900 Malus domestica HOM05D001601 ORTHO05D002628 2.4e-06 55.8 95 28.4
Oeu015560.1 Olea europaea HOM05D001601 ORTHO05D002628 2.4e-06 55.8 90 28.9
Oeu015561.1 Olea europaea HOM05D001601 ORTHO05D002628 2.4e-06 55.8 90 28.9
TAR371G0743 Trochodendron aralioides HOM05D003687 ORTHO05D006936 2.4e-06 55.8 63 44.4
Carub.0003s3072 Capsella rubella HOM05D001601 ORTHO05D002628 3.1e-06 55.5 84 29.8
DCAR_007086 Daucus carota HOM05D001601 ORTHO05D002628 3.1e-06 55.5 75 33.3
MD10G1309600 Malus domestica HOM05D001601 ORTHO05D006936 3.1e-06 55.5 76 36.8
AL3G49670 Arabidopsis lyrata HOM05D001601 ORTHO05D002628 4.1e-06 55.1 84 29.8
AT2G16910 Arabidopsis thaliana HOM05D001601 ORTHO05D002628 4.1e-06 55.1 84 29.8
CARHR107200 Cardamine hirsuta HOM05D001601 ORTHO05D002628 4.1e-06 55.1 84 29.8
Lj4g0002570 Lotus japonicus HOM05D001601 ORTHO05D006936 4.1e-06 55.1 91 29.7
CSS0049556 Camellia sinensis var. sinensis HOM05D001601 ORTHO05D002628 5.4e-06 54.7 98 29.6
QL05p077813 Quercus lobata HOM05D001601 ORTHO05D006936 5.4e-06 54.7 91 30.8
Phvul.006G195500 Phaseolus vulgaris HOM05D001601 ORTHO05D006936 7.0e-06 54.3 92 30.4
Prupe.8G166800 Prunus persica HOM05D001601 ORTHO05D002628 7.0e-06 54.3 79 32.9
Sc14g0002300 Simmondsia chinensis HOM05D001601 ORTHO05D002628 7.0e-06 54.3 81 32.1
Peaxi162Scf00931g00515 Petunia axillaris HOM05D001601 ORTHO05D006936 9.1e-06 53.9 91 33.0


User provided reference genes

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