Gene: Sopen02g024580

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g024580
  • Transcript Identifier Sopen02g024580.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 47864629-47865630 : negative

Gene Family Information

  • ID HOM05D001601
  • #Genes/#Species 402/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g024580.1

Descriptions

  • Description Encodes a bHLH transcription factor strongly expressed in the tapetum from late anther stage 5 to early stage 6, and at a lower level in meiocytes. dyt1 mutant exhibits abnormal anther morphology beginning at anther stage 4. DYT1 acts downstream of SPL/NZZ and EMS1/EXS , and is required for normal expression of AMS, MS1 and other tapetum preferential genes. | DYSFUNCTIONAL TAPETUM 1 (DYT1) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: tapetal layer development, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: tapetum, floral meristem, anther primordium | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048658
ISO
PLAZA Integrative Orthologyanther wall tapetum development AT4G21330
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT4G21330

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT4G21330
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT4G21330

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G21330

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 Helix-loop-helix DNA-binding domain superfamily
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)