Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3530 Ceratophyllum demersum HOM05D005380 ORTHO05D006601 1.7e-76 289.3 146 100.0
CDE02G1822 Ceratophyllum demersum HOM05D005380 ORTHO05D006601 2.0e-37 159.5 84 92.9
PGR083G1975 Punica granatum HOM05D005380 ORTHO05D006601 5.1e-33 144.8 82 81.7
Eucgr.E02010 Eucalyptus grandis HOM05D005380 ORTHO05D006601 6.7e-33 144.4 82 80.5
MBI10_g16336_MAGBIO Magnolia biondii HOM05D005380 ORTHO05D006601 6.7e-33 144.4 82 82.9
Manes.11G052180 Manihot esculenta HOM05D005380 ORTHO05D006601 6.7e-33 144.4 83 81.9
Atru.chr10.626 Acer truncatum HOM05D005380 ORTHO05D006601 1.1e-32 143.7 82 82.9
Atru.chr10.630_Atru.chr10.631 Acer truncatum HOM05D005380 ORTHO05D006601 1.1e-32 143.7 82 82.9
Ciclev10014143m.g Citrus clementina HOM05D005380 ORTHO05D006601 1.5e-32 143.3 84 79.8
Os05g0104100 Oryza sativa ssp. japonica HOM05D005380 ORTHO05D006601 1.5e-32 143.3 84 78.6
Potri.003G148700 Populus trichocarpa HOM05D005380 ORTHO05D006601 2.5e-32 142.5 82 80.5
GSVIVG01013627001 Vitis vinifera HOM05D005380 ORTHO05D006601 2.5e-32 142.5 82 81.7
Glyma.03G103900 Glycine max HOM05D005380 ORTHO05D006601 4.3e-32 141.7 84 77.4
Glyma.07G119900 Glycine max HOM05D005380 ORTHO05D006601 7.4e-32 141.0 84 77.4
Potri.001G081900 Populus trichocarpa HOM05D005380 ORTHO05D006601 7.4e-32 141.0 82 79.3
Sabra03G0108200 Salix brachista HOM05D005380 ORTHO05D006601 7.4e-32 141.0 82 79.3
Dinv01434 Davidia involucrata HOM05D005380 ORTHO05D006601 9.7e-32 140.6 82 81.7
CiPaw.10G065000 Carya illinoinensis HOM05D005380 ORTHO05D006601 1.3e-31 140.2 82 78.0
Hma1.2p1_1380F.1_g279310 Hydrangea macrophylla HOM05D005380 ORTHO05D006601 1.3e-31 140.2 82 80.5
Zm00001eb267510 Zea mays HOM05D005380 ORTHO05D006601 1.3e-31 140.2 103 67.0
CANSAT80G1059 Cannabis sativa HOM05D005380 ORTHO05D006601 1.7e-31 139.8 82 80.5
TPR.G31565 Trifolium pratense HOM05D005380 ORTHO05D006601 1.7e-31 139.8 84 75.0
arahy.Tifrunner.gnm1.ann1.GT0B0E Arachis hypogaea HOM05D005380 ORTHO05D006601 2.2e-31 139.4 84 76.2
arahy.Tifrunner.gnm1.ann1.UEF6CF Arachis hypogaea HOM05D005380 ORTHO05D006601 2.2e-31 139.4 84 76.2
VMungo0331G1684 Vigna mungo HOM05D005380 ORTHO05D006601 2.2e-31 139.4 84 76.2
TWI09G1549 Tripterygium wilfordii HOM05D005380 ORTHO05D006601 2.8e-31 139.0 82 78.0
Nn1g01426 Nelumbo nucifera HOM05D005380 ORTHO05D006601 3.7e-31 138.7 82 80.5
Thecc.06G135400 Theobroma cacao HOM05D005380 ORTHO05D006601 3.7e-31 138.7 82 79.3
COL.COLO4_30926 Corchorus olitorius HOM05D005380 ORTHO05D006601 4.8e-31 138.3 82 79.3
Haze_06032 Corylus avellana HOM05D005380 ORTHO05D006601 4.8e-31 138.3 83 77.1
Medtr8g012560 Medicago truncatula HOM05D005380 ORTHO05D006601 4.8e-31 138.3 84 73.8
FvH4_3g11790 Fragaria vesca HOM05D005380 ORTHO05D006601 6.3e-31 137.9 82 78.0
FAN16G1170 Fragaria x ananassa HOM05D005380 ORTHO05D006601 6.3e-31 137.9 82 78.0
FAN21G3255 Fragaria x ananassa HOM05D005380 ORTHO05D006601 6.3e-31 137.9 82 78.0
FAN25G3771 Fragaria x ananassa HOM05D005380 ORTHO05D006601 6.3e-31 137.9 82 78.0
Cc09_g06540 Coffea canephora HOM05D005380 ORTHO05D006601 8.2e-31 137.5 82 79.3
RcHm_v2.0_Chr5g0019211 Rosa chinensis HOM05D005380 ORTHO05D006601 8.2e-31 137.5 82 76.8
HanXRQChr14g0457361 Helianthus annuus HOM05D005380 ORTHO05D006601 1.1e-30 137.1 82 78.0
Lj3g0005152 Lotus japonicus HOM05D005380 ORTHO05D006601 1.1e-30 137.1 84 73.8
Psat4g204440 Pisum sativum HOM05D005380 ORTHO05D006601 1.1e-30 137.1 84 73.8
vmacro04057 Vaccinium macrocarpon HOM05D005380 ORTHO05D006601 1.1e-30 137.1 82 79.3
Actinidia12893 Actinidia chinensis HOM05D005380 ORTHO05D006601 1.8e-30 136.3 82 78.0
Lj1A1141T73 Lonicera japonica HOM05D005380 ORTHO05D006601 1.8e-30 136.3 82 78.0
MD10G1238900 Malus domestica HOM05D005380 ORTHO05D006601 1.8e-30 136.3 82 76.8
Rhsim13G0198600 Rhododendron simsii HOM05D005380 ORTHO05D006601 1.8e-30 136.3 82 79.3
Ca_23214_v3 Cicer arietinum L. HOM05D005380 ORTHO05D006601 2.4e-30 136.0 84 72.6
Lsat_1_v5_gn_4_38401 Lactuca sativa HOM05D005380 ORTHO05D006601 2.4e-30 136.0 82 76.8
Peaxi162Scf00128g01143 Petunia axillaris HOM05D005380 ORTHO05D006601 2.4e-30 136.0 82 76.8
QL11p017903 Quercus lobata HOM05D005380 ORTHO05D006601 3.1e-30 135.6 82 76.8
Duzib235G1486 Durio zibethinus HOM05D005380 ORTHO05D006601 4.1e-30 135.2 82 76.8
Lalb_Chr07g0194321 Lupinus albus HOM05D005380 ORTHO05D006601 4.1e-30 135.2 84 71.4
MD05G1259300 Malus domestica HOM05D005380 ORTHO05D006601 4.1e-30 135.2 82 76.8
Sed0014613 Sechium edule HOM05D005380 ORTHO05D006601 4.1e-30 135.2 84 75.0
TAR365G0677 Trochodendron aralioides HOM05D005380 ORTHO05D006601 4.1e-30 135.2 82 79.3
CSS0002209 Camellia sinensis var. sinensis HOM05D005380 ORTHO05D006601 6.9e-30 134.4 82 78.0
CSS0007558 Camellia sinensis var. sinensis HOM05D005380 ORTHO05D006601 6.9e-30 134.4 82 78.0
Hund06739 Selenicereus undatus HOM05D005380 ORTHO05D006601 6.9e-30 134.4 82 75.6
Cfa000719 Carpinus fangiana HOM05D005380 ORTHO05D006601 9.1e-30 134.0 82 76.8
Oeu000486.1 Olea europaea HOM05D005380 ORTHO05D006601 9.1e-30 134.0 82 75.6
HPP92_023728 Vanilla planifolia HOM05D005380 ORTHO05D006601 9.1e-30 134.0 78 80.8
Prupe.4G105500 Prunus persica HOM05D005380 ORTHO05D006601 1.2e-29 133.7 82 74.4
Sc10g0009350 Simmondsia chinensis HOM05D005380 ORTHO05D006601 1.2e-29 133.7 82 75.6
CAN.G890.49 Capsicum annuum HOM05D005380 ORTHO05D006601 1.5e-29 133.3 82 76.8
Gorai.011G051400 Gossypium raimondii HOM05D005380 ORTHO05D006601 2.0e-29 132.9 82 76.8
PSO357G0674 Papaver somniferum HOM05D005380 ORTHO05D006601 2.0e-29 132.9 84 73.8
Sopen05g010460 Solanum pennellii HOM05D005380 ORTHO05D006601 2.0e-29 132.9 82 75.6
SGA_v2.0_scaffold223G42899 Striga asiatica HOM05D005380 ORTHO05D006601 2.0e-29 132.9 84 73.8
Ah.14g085840 Amaranthus hybridus HOM05D005380 ORTHO05D006601 2.6e-29 132.5 82 75.6
DCAR_003768 Daucus carota HOM05D005380 ORTHO05D006601 2.6e-29 132.5 82 73.2
Duzib192G0856 Durio zibethinus HOM05D005380 ORTHO05D006601 2.6e-29 132.5 82 76.8
SEGI_33229 Sequoiadendron giganteum HOM05D005380 ORTHO05D006601 2.6e-29 132.5 102 62.7
Gohir.D10G048301 Gossypium hirsutum HOM05D005380 ORTHO05D006601 3.4e-29 132.1 82 75.6
ECA234G0325 Erigeron canadensis HOM05D005380 ORTHO05D006601 4.5e-29 131.7 82 76.8
ATR0743G092 Amborella trichopoda HOM05D005380 ORTHO05D006601 5.9e-29 131.3 95 66.3
ECA247G3537 Erigeron canadensis HOM05D005380 ORTHO05D006601 5.9e-29 131.3 82 76.8
Nitab4.5_0005179g0030 Nicotiana tabacum HOM05D005380 ORTHO05D006601 5.9e-29 131.3 82 74.4
TWI53G1262 Tripterygium wilfordii HOM05D005380 ORTHO05D006601 5.9e-29 131.3 83 74.7
Cpa.g.sc21.90 Carica papaya HOM05D005380 ORTHO05D006601 1.0e-28 130.6 84 73.8
PSO170G0871 Papaver somniferum HOM05D005380 ORTHO05D006601 1.0e-28 130.6 84 72.6
Aqoxy5G03588 Aquilegia oxysepala HOM05D005380 ORTHO05D006601 1.3e-28 130.2 82 75.6
ClCG01G008980 Citrullus lanatus HOM05D005380 ORTHO05D006601 1.7e-28 129.8 84 71.4
Nitab4.5_0002174g0030 Nicotiana tabacum HOM05D005380 ORTHO05D006601 1.7e-28 129.8 82 73.2
MELO3C021785.2 Cucumis melo HOM05D005380 ORTHO05D006601 2.9e-28 129.0 84 70.2
MSTRG.12176 Avicennia marina HOM05D005380 ORTHO05D006601 6.5e-28 127.9 84 71.4
EL10Ac8g19470 Beta vulgaris HOM05D005380 ORTHO05D006601 6.5e-28 127.9 82 72.0
Migut.M01950 Erythranthe guttata HOM05D005380 ORTHO05D006601 6.5e-28 127.9 84 72.6
CsaV3_1G046710 Cucumis sativus L. HOM05D005380 ORTHO05D006601 8.5e-28 127.5 84 70.2
Aa31LG7G6850 Aethionema arabicum HOM05D005380 ORTHO05D006601 4.2e-27 125.2 74 79.7
BcaB07g32281 Brassica carinata HOM05D005380 ORTHO05D006601 1.2e-26 123.6 74 79.7
BcaC05g26192 Brassica carinata HOM05D005380 ORTHO05D006601 1.2e-26 123.6 74 79.7
BcaNung06594 Brassica carinata HOM05D005380 ORTHO05D006601 1.2e-26 123.6 74 79.7
A09p41900 Brassica napus HOM05D005380 ORTHO05D006601 1.2e-26 123.6 74 79.7
C05p21950 Brassica napus HOM05D005380 ORTHO05D006601 1.2e-26 123.6 74 79.7
BolC5t30892H Brassica oleracea HOM05D003679 ORTHO05D004265 1.2e-26 123.6 74 79.7
BraA09t39678Z Brassica rapa HOM05D005380 ORTHO05D006601 1.2e-26 123.6 74 79.7
CARHR023210 Cardamine hirsuta HOM05D005380 ORTHO05D006601 2.7e-26 122.5 73 79.5
SHI20665 Sapria himalayana HOM05D005380 ORTHO05D006601 3.6e-26 122.1 82 68.3
unitig_747.g21990 Utricularia gibba HOM05D005380 ORTHO05D006601 6.1e-26 121.3 84 65.5
THA.LOC104810347 Tarenaya hassleriana HOM05D005380 ORTHO05D006601 1.5e-24 116.7 74 74.3
Carub.0001s2236 Capsella rubella HOM05D005380 ORTHO05D006601 2.2e-23 112.8 69 78.3
SMO146G0159 Selaginella moellendorffii HOM05D005380 ORTHO05D006601 5.3e-22 108.2 82 59.8
Mapoly0029s0138 Marchantia polymorpha HOM05D005380 ORTHO05D006601 1.7e-20 103.2 82 59.8
AL1G36400 Arabidopsis lyrata HOM05D005380 ORTHO05D006601 8.5e-20 100.9 61 77.0
AT1G22860 Arabidopsis thaliana HOM05D005380 ORTHO05D006601 8.5e-20 100.9 61 77.0
Sp1g20340 Schrenkiella parvula HOM05D005380 ORTHO05D006601 8.5e-20 100.9 61 77.0
Pp3c6_25240 Physcomitrium patens HOM05D005380 ORTHO05D006601 5.5e-19 98.2 80 58.8
AUR62042012 Chenopodium quinoa HOM05D005380 ORTHO05D006601 1.6e-18 96.7 60 71.7
AUR62043348 Chenopodium quinoa HOM05D005380 ORTHO05D006601 1.6e-18 96.7 58 74.1
AagrBONN_evm.TU.Sc2ySwM_362.853 Anthoceros agrestis HOM05D005380 ORTHO05D006601 4.8e-15 85.1 82 52.4
CBR_g10913 Chara braunii HOM05D005380 ORTHO05D006601 8.5e-12 74.3 84 44.0
PRCOL_00002861 Prasinoderma coloniale HOM05D005380 ORTHO05D006601 5.5e-11 71.6 82 42.7
Cre17.g709400 Chlamydomonas reinhardtii HOM05D005380 ORTHO05D006601 1.3e-07 60.5 80 35.0
Phvul.010G053600 Phaseolus vulgaris HOM05D005380 ORTHO05D006601 9.1e-06 54.3 27 88.9
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 9.1e-06 54.3 53 54.7


User provided reference genes

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