Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 3.0e-177 625.2 342 100.0
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 3.2e-118 429.1 343 74.1
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 1.6e-117 426.8 342 73.7
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 1.0e-116 424.1 342 73.4
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 1.3e-116 423.7 324 75.9
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 5.1e-116 421.8 343 73.5
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 6.7e-116 421.4 302 79.5
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 8.7e-116 421.0 342 73.7
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 1.1e-115 420.6 285 83.5
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 4.3e-115 418.7 309 77.7
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 4.8e-114 415.2 316 76.6
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 1.4e-113 413.7 316 75.9
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 1.4e-113 413.7 277 83.0
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 1.8e-113 413.3 338 71.3
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 2.4e-113 412.9 311 76.8
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 5.3e-113 411.8 281 84.0
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 5.3e-113 411.8 338 72.5
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 1.5e-112 410.2 302 77.8
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 1.5e-112 410.2 343 71.4
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 2.0e-112 409.8 342 70.8
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 2.0e-112 409.8 277 83.8
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 2.0e-112 409.8 316 76.3
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 2.0e-112 409.8 316 75.6
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 2.0e-112 409.8 348 69.8
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 2.6e-112 409.5 326 74.2
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 9.9e-112 407.5 311 77.5
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 1.7e-111 406.8 277 80.9
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 2.2e-111 406.4 343 71.4
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 3.8e-111 405.6 337 73.0
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 4.9e-111 405.2 346 70.8
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 4.9e-111 405.2 310 76.8
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 6.4e-111 404.8 342 72.2
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 6.4e-111 404.8 279 81.0
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 6.4e-111 404.8 321 74.1
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 1.1e-110 404.1 343 70.8
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 1.9e-110 403.3 342 69.3
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 1.9e-110 403.3 311 75.2
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 2.4e-110 402.9 281 81.9
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 2.4e-110 402.9 317 74.8
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 4.2e-110 402.1 277 81.9
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 4.2e-110 402.1 316 75.0
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 5.5e-110 401.7 282 82.6
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 7.1e-110 401.4 347 72.0
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 7.1e-110 401.4 276 80.1
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 9.3e-110 401.0 314 74.2
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 1.2e-109 400.6 294 77.9
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 1.6e-109 400.2 276 80.8
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 2.1e-109 399.8 342 69.6
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 3.5e-109 399.1 281 81.5
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 3.5e-109 399.1 296 78.4
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 4.6e-109 398.7 296 78.4
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 6.0e-109 398.3 343 69.7
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 7.9e-109 397.9 277 80.1
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 7.9e-109 397.9 342 69.0
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 7.9e-109 397.9 345 69.3
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 1.0e-108 397.5 334 71.6
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 1.3e-108 397.1 332 71.1
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 2.3e-108 396.4 311 74.3
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 5.1e-108 395.2 317 74.8
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 5.1e-108 395.2 326 70.6
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 6.7e-108 394.8 277 79.1
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 6.7e-108 394.8 342 68.7
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 6.7e-108 394.8 275 80.0
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 6.7e-108 394.8 276 79.3
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 1.1e-107 394.0 283 79.5
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.1e-107 394.0 277 79.8
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 1.1e-107 394.0 277 79.4
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 2.5e-107 392.9 282 79.4
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 2.5e-107 392.9 350 69.1
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 3.3e-107 392.5 306 74.5
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 4.3e-107 392.1 277 79.1
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 4.3e-107 392.1 282 78.4
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 5.6e-107 391.7 277 78.7
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 9.6e-107 391.0 307 73.0
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 1.3e-106 390.6 277 78.7
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 1.3e-106 390.6 277 78.7
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 1.3e-106 390.6 308 73.1
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.3e-106 390.6 316 73.4
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 1.3e-106 390.6 261 83.9
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 1.3e-106 390.6 313 71.6
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 1.6e-106 390.2 277 79.4
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 2.1e-106 389.8 337 69.4
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 2.8e-106 389.4 300 76.3
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 2.8e-106 389.4 277 78.7
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 3.7e-106 389.0 316 73.4
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 3.7e-106 389.0 316 73.4
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 6.2e-106 388.3 260 85.4
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 6.2e-106 388.3 272 81.2
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 6.2e-106 388.3 342 68.1
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 8.2e-106 387.9 277 78.0
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 8.2e-106 387.9 277 78.0
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 8.2e-106 387.9 277 78.0
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 8.2e-106 387.9 277 78.0
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 8.2e-106 387.9 277 78.0
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 8.2e-106 387.9 316 73.1
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 1.1e-105 387.5 279 76.7
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 1.1e-105 387.5 287 78.0
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 1.1e-105 387.5 277 77.6
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.8e-105 386.7 327 70.3
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 1.8e-105 386.7 366 66.7
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 2.4e-105 386.3 277 78.0
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 3.1e-105 386.0 277 77.3
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 4.0e-105 385.6 277 77.6
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 6.9e-105 384.8 264 81.8
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 6.9e-105 384.8 273 79.1
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 9.0e-105 384.4 278 77.0
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 9.0e-105 384.4 312 73.7
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 1.5e-104 383.6 278 77.7
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 1.5e-104 383.6 344 67.7
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 2.0e-104 383.3 313 73.5
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 2.6e-104 382.9 276 77.5
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 4.5e-104 382.1 278 76.6
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 7.6e-104 381.3 277 78.0
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 1.0e-103 380.9 277 77.3
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 1.3e-103 380.6 278 78.8
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 1.3e-103 380.6 284 78.5
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 2.2e-103 379.8 277 76.9
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 2.2e-103 379.8 277 78.0
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 3.8e-103 379.0 322 69.9
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 4.9e-103 378.6 311 72.7
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 6.5e-103 378.3 272 77.9
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 6.5e-103 378.3 277 76.5
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 6.5e-103 378.3 272 77.9
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 4.2e-102 375.6 272 77.6
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 4.2e-102 375.6 272 77.6
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 4.2e-102 375.6 272 77.6
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 4.2e-102 375.6 257 82.9
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 5.5e-102 375.2 257 74.7
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 6.0e-101 371.7 272 78.3
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 3.0e-100 369.4 306 70.6
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 3.3e-99 365.9 277 75.1
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 1.3e-98 364.0 274 73.4
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 3.7e-98 362.5 288 74.7
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 6.3e-98 361.7 253 81.0
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 1.4e-97 360.5 285 72.3
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.2e-96 357.5 253 73.9
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 2.6e-96 356.3 318 67.3
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 3.2e-94 349.4 234 86.3
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 4.2e-94 349.0 267 69.7
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 1.6e-93 347.1 287 71.4
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 4.6e-93 345.5 258 77.1
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 3.0e-92 342.8 253 77.9
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.9e-91 340.1 231 84.4
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 1.5e-88 330.5 231 80.5
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 2.2e-87 326.6 249 71.9
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 2.5e-86 323.2 303 68.3
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 5.5e-86 322.0 230 85.2
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 1.6e-85 320.5 346 61.6
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.7e-85 319.7 313 56.5
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 1.4e-84 317.4 281 68.0
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 1.4e-84 317.4 281 68.0
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 5.1e-84 315.5 272 65.8
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 1.4e-81 307.4 251 61.8
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 1.5e-80 303.9 250 60.4
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 1.5e-75 287.3 376 52.9
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 7.0e-73 278.5 238 73.9
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.6e-72 277.3 285 55.8
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 5.9e-72 275.4 197 82.2
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 1.4e-68 264.2 244 70.1
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 4.4e-67 259.2 198 82.3
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 1.3e-66 257.7 252 70.2
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 1.7e-63 247.3 125 97.6
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 4.0e-60 236.1 275 45.8
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 5.0e-55 219.2 149 72.5
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 2.5e-54 216.9 268 47.0
Gohir.A12G223632 Gossypium hirsutum HOM05D003763 ORTHO05D004315 4.5e-48 196.1 124 76.6
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 7.8e-48 195.3 149 67.1
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.6e-40 171.0 122 75.4
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 7.8e-40 168.7 143 78.3
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 1.8e-36 157.5 102 76.5
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 2.7e-32 143.7 262 39.7
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 1.5e-30 137.9 99 71.7
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 5.6e-30 136.0 96 68.8
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 4.7e-29 132.9 108 73.1
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 2.7e-24 117.1 89 73.0
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 1.8e-20 104.4 140 55.7
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 4.9e-18 96.3 83 83.1
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 2.1e-16 90.9 107 62.6
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 8.7e-15 85.5 122 46.7
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 1.1e-14 85.1 141 52.5
arahy.Tifrunner.gnm1.ann1.AG3Z3P Arachis hypogaea HOM05D003763 ORTHO05D004315 1.8e-12 77.8 93 45.2


User provided reference genes

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