Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 1.4e-276 955.7 476 100.0
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 9.5e-161 570.9 463 62.4
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 6.1e-160 568.2 480 60.0
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 8.0e-160 567.8 476 58.8
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 1.4e-159 567.0 454 61.7
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 3.0e-159 565.8 464 60.1
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 3.0e-159 565.8 451 60.8
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 1.2e-158 563.9 454 60.1
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 2.0e-158 563.1 423 63.4
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 9.8e-158 560.8 477 58.3
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 9.8e-158 560.8 455 60.7
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 1.7e-157 560.1 452 60.8
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 1.1e-156 557.4 452 60.2
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.1e-156 557.4 456 61.6
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 1.4e-156 557.0 453 61.4
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 2.4e-156 556.2 457 58.4
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 3.1e-156 555.8 451 61.0
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 5.4e-156 555.1 437 61.6
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 9.2e-156 554.3 480 56.7
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 9.2e-156 554.3 432 62.3
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 1.2e-155 553.9 432 63.0
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 1.6e-155 553.5 468 58.3
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 3.5e-155 552.4 453 60.0
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 4.5e-155 552.0 451 59.4
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 7.7e-155 551.2 471 58.8
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 1.0e-154 550.8 463 59.0
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 1.0e-154 550.8 423 61.0
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 1.3e-154 550.4 433 61.2
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 1.3e-154 550.4 423 63.1
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 5.0e-154 548.5 437 60.9
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 1.1e-153 547.4 423 60.5
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 2.5e-153 546.2 449 59.9
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 2.8e-152 542.7 472 57.8
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 4.7e-152 542.0 462 58.9
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 1.4e-151 540.4 466 59.4
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 5.2e-151 538.5 449 59.0
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 8.9e-151 537.7 426 62.2
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 7.5e-150 534.6 423 61.2
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 1.7e-149 533.5 423 62.4
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 2.9e-149 532.7 489 56.9
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 2.9e-149 532.7 456 58.1
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 3.7e-149 532.3 423 61.7
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 1.1e-148 530.8 462 58.4
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 3.2e-148 529.3 477 57.2
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 4.1e-148 528.9 460 58.9
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 5.4e-148 528.5 460 58.9
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 5.4e-148 528.5 437 60.0
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 5.4e-148 528.5 461 57.7
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 1.2e-147 527.3 489 56.4
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 1.6e-147 526.9 478 56.5
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 2.0e-147 526.6 467 57.2
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 2.7e-147 526.2 463 58.5
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 4.6e-147 525.4 437 58.1
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 4.6e-147 525.4 455 57.8
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 4.6e-147 525.4 462 57.6
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 4.6e-147 525.4 454 58.4
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 4.6e-147 525.4 476 55.9
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 4.6e-147 525.4 475 57.3
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 7.8e-147 524.6 488 55.9
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 1.0e-146 524.2 485 56.1
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 1.0e-146 524.2 478 56.3
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 1.0e-146 524.2 474 56.3
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 1.7e-146 523.5 465 56.6
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 6.6e-146 521.5 454 57.0
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 6.6e-146 521.5 476 55.3
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 8.6e-146 521.2 479 55.7
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 1.9e-145 520.0 460 57.6
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 2.5e-145 519.6 447 59.1
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 4.3e-145 518.8 442 58.8
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 9.5e-145 517.7 488 55.3
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 1.6e-144 516.9 442 58.1
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 1.8e-143 513.5 471 55.8
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 2.3e-143 513.1 424 60.6
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 3.1e-143 512.7 466 56.4
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 4.4e-142 508.8 434 59.9
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 1.7e-141 506.9 475 55.6
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.9e-140 503.4 439 56.7
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 1.9e-140 503.4 437 56.5
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 5.6e-137 491.9 423 57.7
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 2.3e-135 486.5 466 53.9
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 4.4e-134 482.3 445 56.9
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 6.4e-133 478.4 472 50.8
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 1.3e-125 454.1 386 57.0
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 8.6e-122 441.4 376 57.4
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 8.1e-120 434.9 320 65.0
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 5.2e-119 432.2 420 50.5
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 2.4e-116 423.3 341 60.1
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 1.1e-113 414.5 384 54.4
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 4.2e-108 396.0 317 59.9
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 2.7e-107 393.3 468 42.1
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 1.9e-100 370.5 431 46.2
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 4.9e-93 345.9 387 45.5
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 9.3e-92 341.7 381 43.3
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 2.3e-90 337.0 441 41.3
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 2.5e-89 333.6 363 48.8
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 9.7e-89 331.6 400 44.8
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 2.2e-85 320.5 259 63.3
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 2.3e-82 310.5 455 40.9
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 7.4e-81 305.4 257 61.9
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 8.2e-80 302.0 258 57.0
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.2e-78 298.1 320 51.6
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 2.0e-78 297.4 233 63.5
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 3.8e-77 293.1 301 49.8
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 1.1e-71 275.0 242 56.6
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 6.5e-61 239.2 259 49.8
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 9.4e-60 235.3 211 55.0
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 4.1e-55 219.9 205 55.1
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 4.5e-54 216.5 187 56.1
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 8.8e-50 202.2 237 47.3
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 9.8e-41 172.2 117 68.4
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 7.0e-39 166.0 117 65.8
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 2.3e-37 161.0 116 64.7
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 5.0e-37 159.8 132 59.1
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 2.0e-25 121.3 106 58.5
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 7.0e-23 112.8 115 48.7
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 4.6e-22 110.2 101 52.5
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 6.0e-06 56.6 31 80.6


User provided reference genes

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