Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0799 Ceratophyllum demersum HOM05D005984 ORTHO05D007754 9.7e-198 693.3 366 100.0
CDE07G0658 Ceratophyllum demersum HOM05D005984 ORTHO05D007754 1.3e-186 656.4 402 87.3
TAR629G1998 Trochodendron aralioides HOM05D005984 ORTHO05D007754 3.2e-156 555.4 404 71.0
Dinv11718 Davidia involucrata HOM05D005984 ORTHO05D007754 1.2e-152 543.5 408 73.8
arahy.Tifrunner.gnm1.ann1.B6F48P Arachis hypogaea HOM05D005984 ORTHO05D007754 1.8e-151 539.7 439 65.4
Cpa.g.sc44.38 Carica papaya HOM05D005984 ORTHO05D007754 1.8e-151 539.7 398 69.8
arahy.Tifrunner.gnm1.ann1.0C6YUW Arachis hypogaea HOM05D005984 ORTHO05D007754 5.2e-151 538.1 439 65.4
GSVIVG01012045001 Vitis vinifera HOM05D005984 ORTHO05D007754 5.8e-150 534.6 408 69.6
CANSAT56G2432 Cannabis sativa HOM05D005984 ORTHO05D007754 4.9e-149 531.6 409 73.3
Gorai.005G210500 Gossypium raimondii HOM05D005984 ORTHO05D007754 3.2e-148 528.9 411 67.4
Gohir.D02G187800 Gossypium hirsutum HOM05D005984 ORTHO05D007754 5.4e-148 528.1 411 67.2
CsaV3_7G030600 Cucumis sativus L. HOM05D005984 ORTHO05D007754 7.1e-148 527.7 413 67.8
Cfa008738 Carpinus fangiana HOM05D005984 ORTHO05D007754 2.1e-147 526.2 407 69.0
Gohir.A03G164600 Gossypium hirsutum HOM05D005984 ORTHO05D007754 3.5e-147 525.4 412 66.7
Sed0023953 Sechium edule HOM05D005984 ORTHO05D007754 3.5e-147 525.4 407 71.7
FAN12G1392 Fragaria x ananassa HOM05D005984 ORTHO05D007754 6.0e-147 524.6 409 73.6
Thecc.02G160200 Theobroma cacao HOM05D005984 ORTHO05D007754 7.8e-147 524.2 412 67.7
CiPaw.06G060100 Carya illinoinensis HOM05D005984 ORTHO05D007754 3.9e-146 521.9 419 68.0
PSO782G0234 Papaver somniferum HOM05D005984 ORTHO05D007754 3.9e-146 521.9 419 66.1
ATR0618G114 Amborella trichopoda HOM05D005984 ORTHO05D007754 6.6e-146 521.2 407 67.6
Glyma.11G100800 Glycine max HOM05D005984 ORTHO05D007754 6.6e-146 521.2 405 68.6
TPR.G32343 Trifolium pratense HOM05D005984 ORTHO05D007754 6.6e-146 521.2 403 69.0
Sed0006813 Sechium edule HOM05D005984 ORTHO05D007754 8.6e-146 520.8 405 68.4
FvH4_4g36890 Fragaria vesca HOM05D005984 ORTHO05D007754 1.1e-145 520.4 410 73.4
Aqoxy3G04258 Aquilegia oxysepala HOM05D005984 ORTHO05D007754 3.3e-145 518.8 427 66.0
RcHm_v2.0_Chr4g0446671 Rosa chinensis HOM05D005984 ORTHO05D007754 5.6e-145 518.1 410 73.2
PSO063G6567 Papaver somniferum HOM05D005984 ORTHO05D007754 7.3e-145 517.7 420 65.7
AL6G34310 Arabidopsis lyrata HOM05D005984 ORTHO05D007754 9.5e-145 517.3 407 71.0
Glyma.12G026900 Glycine max HOM05D005984 ORTHO05D007754 9.5e-145 517.3 405 68.1
ClCG09G004540 Citrullus lanatus HOM05D005984 ORTHO05D007754 2.1e-144 516.2 411 65.7
TWI53G1952 Tripterygium wilfordii HOM05D005984 ORTHO05D007754 2.1e-144 516.2 396 68.9
Lj3g0024041 Lotus japonicus HOM05D005984 ORTHO05D007754 2.8e-144 515.8 405 73.3
Lalb_Chr03g0024761 Lupinus albus HOM05D005984 ORTHO05D007754 2.8e-144 515.8 406 72.4
VMungo0647G2306 Vigna mungo HOM05D005984 ORTHO05D007754 2.8e-144 515.8 369 71.8
Actinidia13710 Actinidia chinensis HOM05D005984 ORTHO05D007754 6.2e-144 514.6 413 66.1
Thhalv10004338m.g Eutrema salsugineum HOM05D005984 ORTHO05D007754 6.2e-144 514.6 411 65.2
VMungo1127G1047 Vigna mungo HOM05D005984 ORTHO05D007754 8.1e-144 514.2 408 67.4
Ciclev10031672m.g Citrus clementina HOM05D005984 ORTHO05D007754 1.1e-143 513.8 405 70.1
Duzib052G0297 Durio zibethinus HOM05D005984 ORTHO05D007754 1.1e-143 513.8 416 64.7
Manes.11G108100 Manihot esculenta HOM05D005984 ORTHO05D007754 1.1e-143 513.8 367 77.4
CSS0012805 Camellia sinensis var. sinensis HOM05D005984 ORTHO05D007754 1.8e-143 513.1 368 71.2
Actinidia38413 Actinidia chinensis HOM05D005984 ORTHO05D007754 2.3e-143 512.7 406 66.5
AT5G23120 Arabidopsis thaliana HOM05D005984 ORTHO05D007754 3.1e-143 512.3 413 65.1
Carub.0006s2091 Capsella rubella HOM05D005984 ORTHO05D007754 3.1e-143 512.3 417 64.3
Hma1.2p1_0122F.1_g057600 Hydrangea macrophylla HOM05D005984 ORTHO05D007754 3.1e-143 512.3 418 67.7
Phvul.011G029800 Phaseolus vulgaris HOM05D005984 ORTHO05D007754 3.1e-143 512.3 407 67.6
Nn3g18651 Nelumbo nucifera HOM05D005984 ORTHO05D007754 4.0e-143 511.9 383 69.5
Medtr4g075040 Medicago truncatula HOM05D005984 ORTHO05D007754 5.2e-143 511.5 405 67.4
Psat7g177360 Pisum sativum HOM05D005984 ORTHO05D007754 8.9e-143 510.8 403 68.0
MD13G1005900 Malus domestica HOM05D005984 ORTHO05D007754 2.6e-142 509.2 413 66.6
Prupe.1G347100 Prunus persica HOM05D005984 ORTHO05D007754 2.6e-142 509.2 410 71.2
Manes.04G064200 Manihot esculenta HOM05D005984 ORTHO05D007754 4.4e-142 508.4 370 74.6
THA.LOC104800911 Tarenaya hassleriana HOM05D005984 ORTHO05D007754 4.4e-142 508.4 405 65.9
C07p44410 Brassica napus HOM05D005984 ORTHO05D007754 5.8e-142 508.1 410 65.1
FAN07G1379 Fragaria x ananassa HOM05D005984 ORTHO05D007754 5.8e-142 508.1 435 69.0
ECA246G1868 Erigeron canadensis HOM05D005984 ORTHO05D007754 7.6e-142 507.7 367 75.2
BolC7t44963H Brassica oleracea HOM05D005984 ORTHO05D007754 1.3e-141 506.9 410 65.1
Atru.chr11.1117 Acer truncatum HOM05D005984 ORTHO05D007754 2.2e-141 506.1 372 74.5
Aa31LG11G2610 Aethionema arabicum HOM05D005984 ORTHO05D007754 2.9e-141 505.8 418 68.2
Sabra07G0060100 Salix brachista HOM05D005984 ORTHO05D007754 2.9e-141 505.8 389 67.1
Sp2g24000 Schrenkiella parvula HOM05D005984 ORTHO05D007754 2.9e-141 505.8 412 68.9
A03p46390 Brassica napus HOM05D005984 ORTHO05D007754 3.7e-141 505.4 413 64.2
BraA03t13765Z Brassica rapa HOM05D005984 ORTHO05D007754 3.7e-141 505.4 413 64.2
Ca_19021_v3 Cicer arietinum L. HOM05D005984 ORTHO05D007754 4.9e-141 505.0 425 64.9
Potri.007G071300 Populus trichocarpa HOM05D005984 ORTHO05D007754 4.9e-141 505.0 389 67.4
CARHR190410 Cardamine hirsuta HOM05D005984 ORTHO05D007754 1.9e-140 503.1 418 68.4
COL.COLO4_19602 Corchorus olitorius HOM05D005984 ORTHO05D007754 1.9e-140 503.1 455 60.9
vmacro08597 Vaccinium macrocarpon HOM05D005984 ORTHO05D007754 5.4e-140 501.5 360 76.1
MD16G1002000 Malus domestica HOM05D005984 ORTHO05D007754 1.2e-139 500.4 408 70.8
Haze_11755 Corylus avellana HOM05D005984 ORTHO05D007754 6.0e-139 498.0 419 65.2
DCAR_002576 Daucus carota HOM05D005984 ORTHO05D007754 1.0e-138 497.3 404 65.6
PGR044G2022 Punica granatum HOM05D005984 ORTHO05D007754 1.0e-138 497.3 366 69.7
Zm00001eb271820 Zea mays HOM05D005984 ORTHO05D007754 2.3e-138 496.1 377 68.2
Os06g0729650 Oryza sativa ssp. japonica HOM05D005984 ORTHO05D007754 3.9e-138 495.4 371 69.5
CAN.G157.24 Capsicum annuum HOM05D005984 ORTHO05D007754 6.6e-138 494.6 363 70.2
PGSC0003DMG400002324 Solanum tuberosum HOM05D005984 ORTHO05D007754 8.6e-138 494.2 374 67.9
Lsat_1_v5_gn_3_35480 Lactuca sativa HOM05D005984 ORTHO05D007754 1.1e-137 493.8 363 73.8
Sopen02g003530 Solanum pennellii HOM05D005984 ORTHO05D007754 1.1e-137 493.8 376 67.6
HPP92_012878 Vanilla planifolia HOM05D005984 ORTHO05D007754 1.2e-136 490.3 354 69.8
MELO3C023596.2 Cucumis melo HOM05D005984 ORTHO05D007754 4.7e-136 488.4 390 66.4
Cc11_g02280 Coffea canephora HOM05D005984 ORTHO05D007754 8.1e-136 487.6 419 62.5
Eucgr.J00865 Eucalyptus grandis HOM05D005984 ORTHO05D007754 1.8e-135 486.5 359 74.4
AUR62017696 Chenopodium quinoa HOM05D005984 ORTHO05D007754 4.0e-135 485.3 354 75.4
Lj3A850G95 Lonicera japonica HOM05D005984 ORTHO05D007754 4.0e-135 485.3 427 62.5
MSTRG.431 Avicennia marina HOM05D005984 ORTHO05D007754 7.6e-134 481.1 412 62.9
Rhsim04G0167300 Rhododendron simsii HOM05D005984 ORTHO05D007754 3.2e-132 475.7 359 68.5
unitig_8.g2892 Utricularia gibba HOM05D005984 ORTHO05D007754 5.4e-132 474.9 396 63.4
SGA_v2.0_scaffold88G27230 Striga asiatica HOM05D005984 ORTHO05D007754 1.2e-131 473.8 373 70.0
Hund08579 Selenicereus undatus HOM05D005984 ORTHO05D007754 2.1e-131 473.0 379 65.2
AUR62015232 Chenopodium quinoa HOM05D005984 ORTHO05D007754 3.5e-131 472.2 327 78.3
AUR62015234 Chenopodium quinoa HOM05D005984 ORTHO05D007754 3.5e-131 472.2 327 78.3
Oeu026903.3 Olea europaea HOM05D005984 ORTHO05D007754 3.5e-131 472.2 435 63.7
EL10Ac9g22946 Beta vulgaris HOM05D005984 ORTHO05D007754 1.3e-130 470.3 372 65.6
HanXRQChr17g0544921 Helianthus annuus HOM05D005984 ORTHO05D007754 2.5e-129 466.1 368 71.5
Solyc02g014150.4 Solanum lycopersicum HOM05D005984 ORTHO05D007754 5.8e-126 454.9 353 66.9
QL03p045967 Quercus lobata HOM05D005984 ORTHO05D007754 9.9e-126 454.1 501 52.3
HanXRQChr06g0171511 Helianthus annuus HOM05D005984 ORTHO05D007754 1.7e-125 453.4 337 73.9
SMO347G0352 Selaginella moellendorffii HOM05D005984 ORTHO05D007754 2.4e-124 449.5 386 60.1
Migut.E00699 Erythranthe guttata HOM05D005984 ORTHO05D007754 4.2e-124 448.7 412 60.4
Pp3c15_7930 Physcomitrium patens HOM05D005984 ORTHO05D007754 1.2e-123 447.2 413 63.2
FAN17G0887 Fragaria x ananassa HOM05D005984 ORTHO05D007754 2.1e-123 446.4 423 65.0
Nitab4.5_0000133g0050 Nicotiana tabacum HOM05D005984 ORTHO05D007754 2.1e-123 446.4 541 52.9
Sc10g0006780 Simmondsia chinensis HOM05D005984 ORTHO05D007754 4.6e-123 445.3 395 62.5
SalBow2G1456 Salvia bowleyana HOM05D005984 ORTHO05D007754 1.3e-122 443.7 498 55.0
Pp3c9_10350 Physcomitrium patens HOM05D005984 ORTHO05D007754 5.6e-121 438.3 370 67.3
Ah.01g001560 Amaranthus hybridus HOM05D005984 ORTHO05D007754 4.0e-119 432.2 402 57.2
Nitab4.5_0006277g0020 Nicotiana tabacum HOM05D005984 ORTHO05D007754 1.1e-116 424.1 573 49.0
Mapoly0020s0149 Marchantia polymorpha HOM05D005984 ORTHO05D007754 5.6e-113 411.8 374 56.1
Peaxi162Scf00363g00317 Petunia axillaris HOM05D005984 ORTHO05D007754 3.0e-106 389.4 496 50.8
CBR_g11122 Chara braunii HOM05D005984 ORTHO05D007754 9.0e-95 351.3 352 56.2
MCO05G498 Micromonas commoda HOM05D005984 ORTHO05D007754 4.1e-87 325.9 409 48.4
AagrBONN_evm.TU.Sc2ySwM_369.365 Anthoceros agrestis HOM05D005984 ORTHO05D007754 2.2e-85 320.1 337 56.7
Cre06.g273700 Chlamydomonas reinhardtii HOM05D005984 ORTHO05D007754 4.2e-84 315.8 374 51.9
Dinv01185 Davidia involucrata HOM05D005984 ORTHO05D007754 6.3e-80 302.0 203 74.4
Hma1.2p1_0122F.1_g057590 Hydrangea macrophylla HOM05D005984 ORTHO05D007754 1.6e-70 270.8 209 67.9
PRCOL_00000217 Prasinoderma coloniale HOM05D005984 ORTHO05D007754 6.3e-56 222.2 292 48.6
AagrBONN_evm.TU.Sc2ySwM_368.563 Anthoceros agrestis HOM05D001974 ORTHO05D001995 1.5e-49 201.1 397 38.0
C09p07860 Brassica napus HOM05D005984 ORTHO05D007754 1.1e-44 184.9 168 60.1
SEGI_34707 Sequoiadendron giganteum HOM05D005984 ORTHO05D007754 1.1e-44 184.9 122 73.8
MD00G1043400 Malus domestica HOM05D005984 ORTHO05D007754 1.5e-44 184.5 111 80.2
HanXRQChr10g0318441 Helianthus annuus HOM05D005984 ORTHO05D007754 5.4e-31 139.4 67 91.0
MD15G1106700 Malus domestica HOM05D005984 ORTHO05D007754 1.2e-30 138.3 114 63.2
arahy.Tifrunner.gnm1.ann1.25R2K9 Arachis hypogaea HOM05D005984 ORTHO05D014444 2.1e-27 127.5 85 71.8
BcaB04g19886 Brassica carinata HOM05D005984 ORTHO05D007754 6.2e-27 125.9 176 46.0
arahy.Tifrunner.gnm1.ann1.B9R6EW Arachis hypogaea HOM05D005984 ORTHO05D014444 3.1e-26 123.6 84 70.2
SEGI_27749 Sequoiadendron giganteum HOM05D005984 ORTHO05D007754 1.6e-19 101.3 53 83.0
C09p07870 Brassica napus HOM05D005984 ORTHO05D042888 2.8e-19 100.5 103 52.4
MBI03_g15323_MAGBIO Magnolia biondii HOM05D002934 ORTHO05D003937 3.4e-17 93.6 62 74.2
AUR62024854 Chenopodium quinoa HOM05D005984 ORTHO05D007754 9.9e-17 92.0 54 83.3
Zm00001eb227280 Zea mays HOM05D005984 ORTHO05D007754 6.0e-14 82.8 62 62.9
BolC9t53702H Brassica oleracea HOM05D005984 ORTHO05D042888 4.3e-12 76.6 63 61.9
Glyma.06G237300 Glycine max HOM05D005984 ORTHO05D007754 6.9e-10 69.3 43 76.7
Pp3c24_8290 Physcomitrium patens HOM05D013586 ORTHO05D011470 2.0e-09 67.8 38 76.3
AUR62043071 Chenopodium quinoa HOM05D003339 ORTHO05D003847 2.9e-08 63.9 39 71.8
SGA_v2.0_scaffold57G20111 Striga asiatica HOM05D005984 ORTHO05D402503 4.9e-08 63.2 44 63.6


User provided reference genes

Program Settings