Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0163 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 1.0e-165 586.6 287 100.0
CDE06G0795 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 2.7e-134 482.3 265 91.7
Nn6g35217 Nelumbo nucifera HOM05D004689 ORTHO05D006269 6.2e-123 444.5 242 90.9
PGSC0003DMG400003874 Solanum tuberosum HOM05D004689 ORTHO05D006269 8.9e-122 440.7 244 88.5
MSTRG.19190 Avicennia marina HOM05D004689 ORTHO05D006269 3.4e-121 438.7 241 90.0
CiPaw.10G001700 Carya illinoinensis HOM05D004689 ORTHO05D006269 1.7e-120 436.4 242 89.3
TAR633G1835 Trochodendron aralioides HOM05D004689 ORTHO05D006269 2.2e-120 436.0 243 88.9
Actinidia32476 Actinidia chinensis HOM05D004689 ORTHO05D006269 2.9e-120 435.6 241 90.0
PSO675G8307 Papaver somniferum HOM05D004689 ORTHO05D006269 6.4e-120 434.5 243 88.5
TAR369G0565 Trochodendron aralioides HOM05D004689 ORTHO05D006269 6.4e-120 434.5 243 88.9
arahy.Tifrunner.gnm1.ann1.0YCB9L Arachis hypogaea HOM05D004689 ORTHO05D006269 1.4e-119 433.3 242 89.3
arahy.Tifrunner.gnm1.ann1.98D3Z3 Arachis hypogaea HOM05D004689 ORTHO05D006269 1.4e-119 433.3 242 89.3
CANSAT80G2663 Cannabis sativa HOM05D004689 ORTHO05D006269 1.4e-119 433.3 242 88.8
FAN02G2373 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.4e-119 433.3 244 88.9
FAN14G4883 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.4e-119 433.3 244 88.9
Cfa021476 Carpinus fangiana HOM05D004689 ORTHO05D006269 1.9e-119 433.0 244 87.7
SGA_v2.0_scaffold40G15470 Striga asiatica HOM05D004689 ORTHO05D006269 1.9e-119 433.0 244 88.5
EL10Ac7g16690 Beta vulgaris HOM05D004689 ORTHO05D006269 2.4e-119 432.6 246 88.2
CSS0004382 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 2.4e-119 432.6 244 89.3
CSS0024828 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 2.4e-119 432.6 244 89.3
Phvul.005G180000 Phaseolus vulgaris HOM05D004689 ORTHO05D006269 2.4e-119 432.6 244 88.5
Solyc09g008470.4 Solanum lycopersicum HOM05D004689 ORTHO05D006269 2.4e-119 432.6 242 88.0
Lalb_Chr04g0254861 Lupinus albus HOM05D004689 ORTHO05D006269 3.2e-119 432.2 244 88.1
QL03p020097 Quercus lobata HOM05D004689 ORTHO05D006269 3.2e-119 432.2 242 88.4
Sopen09g003300 Solanum pennellii HOM05D004689 ORTHO05D006269 3.2e-119 432.2 242 88.0
PSO541G4270 Papaver somniferum HOM05D004689 ORTHO05D006269 9.2e-119 430.6 241 88.4
Lj3g0015942 Lotus japonicus HOM05D004689 ORTHO05D006269 1.6e-118 429.9 244 87.7
Peaxi162Scf00407g00631 Petunia axillaris HOM05D004689 ORTHO05D006269 2.1e-118 429.5 256 85.9
GSVIVG01033687001 Vitis vinifera HOM05D004689 ORTHO05D006269 4.6e-118 428.3 239 89.1
Migut.J00456 Erythranthe guttata HOM05D004689 ORTHO05D006269 6.0e-118 427.9 243 88.9
Glyma.13G367400 Glycine max HOM05D004689 ORTHO05D006269 6.0e-118 427.9 244 87.7
Sc20g0005690 Simmondsia chinensis HOM05D004689 ORTHO05D006269 6.0e-118 427.9 244 88.1
VMungo0917G0001 Vigna mungo HOM05D004689 ORTHO05D006269 6.0e-118 427.9 242 88.8
Glyma.15G005900 Glycine max HOM05D004689 ORTHO05D006269 1.0e-117 427.2 242 88.4
CsaV3_3G036230 Cucumis sativus L. HOM05D004689 ORTHO05D006269 1.3e-117 426.8 242 88.8
Oeu042111.1 Olea europaea HOM05D004689 ORTHO05D006269 1.3e-117 426.8 220 94.5
Ah.15g091430 Amaranthus hybridus HOM05D004689 ORTHO05D006269 1.7e-117 426.4 247 86.2
Lsat_1_v5_gn_1_52460 Lactuca sativa HOM05D004689 ORTHO05D006269 1.7e-117 426.4 234 90.6
FAN05G0091 Fragaria x ananassa HOM05D004689 ORTHO05D006269 3.0e-117 425.6 253 85.8
FAN05G3347 Fragaria x ananassa HOM05D004689 ORTHO05D006269 3.0e-117 425.6 253 85.8
Prupe.7G125300 Prunus persica HOM05D004689 ORTHO05D006269 3.9e-117 425.2 241 88.8
DCAR_020804 Daucus carota HOM05D004689 ORTHO05D006269 6.6e-117 424.5 241 87.1
FAN09G4523 Fragaria x ananassa HOM05D004689 ORTHO05D006269 6.6e-117 424.5 256 84.8
RcHm_v2.0_Chr3g0470901 Rosa chinensis HOM05D004689 ORTHO05D006269 1.1e-116 423.7 220 93.6
AUR62026953 Chenopodium quinoa HOM05D004689 ORTHO05D006269 1.5e-116 423.3 241 87.1
Ca_23152_v3 Cicer arietinum L. HOM05D004689 ORTHO05D006269 1.9e-116 422.9 242 86.8
Hund19382 Selenicereus undatus HOM05D004689 ORTHO05D006269 2.5e-116 422.5 245 87.8
TWI74G0641 Tripterygium wilfordii HOM05D004689 ORTHO05D006269 2.5e-116 422.5 231 89.6
Atru.chr8.1747 Acer truncatum HOM05D004689 ORTHO05D006269 3.3e-116 422.2 251 84.9
ECA238G3499 Erigeron canadensis HOM05D004689 ORTHO05D006269 5.6e-116 421.4 234 89.7
Sed0022535 Sechium edule HOM05D004689 ORTHO05D006269 5.6e-116 421.4 236 89.8
Lalb_Chr10g0099851 Lupinus albus HOM05D004689 ORTHO05D006269 9.5e-116 420.6 244 86.1
Ah.08g211440 Amaranthus hybridus HOM05D004689 ORTHO05D006269 1.6e-115 419.9 241 86.7
Aqoxy2G01650 Aquilegia oxysepala HOM05D004689 ORTHO05D006269 2.1e-115 419.5 220 93.6
MELO3C009381.2 Cucumis melo HOM05D004689 ORTHO05D006269 2.1e-115 419.5 251 85.7
Nitab4.5_0003314g0100 Nicotiana tabacum HOM05D004689 ORTHO05D006269 2.8e-115 419.1 219 92.7
Ciclev10012150m.g Citrus clementina HOM05D004689 ORTHO05D006269 3.6e-115 418.7 230 90.4
Medtr8g009970 Medicago truncatula HOM05D004689 ORTHO05D006269 4.7e-115 418.3 242 84.7
Potri.016G097600 Populus trichocarpa HOM05D004689 ORTHO05D006269 6.2e-115 417.9 247 85.4
unitig_26.g9238 Utricularia gibba HOM05D004689 ORTHO05D006269 8.1e-115 417.5 265 80.8
Potri.006G121300 Populus trichocarpa HOM05D004689 ORTHO05D006269 1.1e-114 417.2 230 89.6
RhsimUnG0004400 Rhododendron simsii HOM05D004689 ORTHO05D006269 1.1e-114 417.2 247 87.4
RhsimUnG0067800 Rhododendron simsii HOM05D004689 ORTHO05D006269 1.1e-114 417.2 247 87.4
TPR.G17360 Trifolium pratense HOM05D004689 ORTHO05D006269 1.8e-114 416.4 241 85.1
Duzib128G1555 Durio zibethinus HOM05D004689 ORTHO05D006269 3.1e-114 415.6 232 88.4
Hma1.2p1_0225F.1_g095000 Hydrangea macrophylla HOM05D004689 ORTHO05D006269 6.8e-114 414.5 219 91.8
HanXRQChr13g0402661 Helianthus annuus HOM05D004689 ORTHO05D006269 8.9e-114 414.1 222 91.9
PGR119G0162 Punica granatum HOM05D004689 ORTHO05D006269 8.9e-114 414.1 220 91.4
Thecc.05G071600 Theobroma cacao HOM05D004689 ORTHO05D006269 1.5e-113 413.3 220 91.4
Thecc.05G071900 Theobroma cacao HOM05D004689 ORTHO05D006269 1.5e-113 413.3 220 91.4
Gohir.D09G140400 Gossypium hirsutum HOM05D004689 ORTHO05D006269 2.0e-113 412.9 236 86.9
Gorai.006G161000 Gossypium raimondii HOM05D004689 ORTHO05D006269 2.0e-113 412.9 236 86.9
RcHm_v2.0_Chr7g0191101 Rosa chinensis HOM05D004689 ORTHO05D006269 2.6e-113 412.5 242 85.1
Eucgr.K02436 Eucalyptus grandis HOM05D004689 ORTHO05D006269 3.4e-113 412.1 220 91.8
COL.COLO4_26909 Corchorus olitorius HOM05D004689 ORTHO05D006269 4.4e-113 411.8 220 90.9
Aa31LG5G4730 Aethionema arabicum HOM05D004689 ORTHO05D006269 5.8e-113 411.4 231 88.3
MD12G1106500 Malus domestica HOM05D004689 ORTHO05D006269 5.8e-113 411.4 220 92.3
Gohir.A09G144600 Gossypium hirsutum HOM05D004689 ORTHO05D006269 1.7e-112 409.8 236 86.4
CARHR126450 Cardamine hirsuta HOM05D004689 ORTHO05D006269 2.2e-112 409.5 222 89.2
THA.LOC104816037 Tarenaya hassleriana HOM05D004689 ORTHO05D006269 1.1e-111 407.1 231 86.6
AL4G28000 Arabidopsis lyrata HOM05D004689 ORTHO05D006269 1.9e-111 406.4 231 86.1
HPP92_017214 Vanilla planifolia HOM05D004689 ORTHO05D006269 5.4e-111 404.8 232 86.6
AT2G32600 Arabidopsis thaliana HOM05D004689 ORTHO05D006269 9.2e-111 404.1 231 85.7
Sp4g14930 Schrenkiella parvula HOM05D004689 ORTHO05D006269 1.6e-110 403.3 233 85.4
ClCG10G019870 Citrullus lanatus HOM05D004689 ORTHO05D006269 2.1e-110 402.9 250 84.8
Lj3C990G15 Lonicera japonica HOM05D004689 ORTHO05D006269 2.1e-110 402.9 209 94.3
Carub.0004s1393 Capsella rubella HOM05D004689 ORTHO05D006269 2.7e-110 402.5 231 85.7
C04p17070 Brassica napus HOM05D004689 ORTHO05D006269 4.6e-110 401.7 222 86.9
BolC4t23259H Brassica oleracea HOM05D004689 ORTHO05D006269 4.6e-110 401.7 222 86.9
Thhalv10017051m.g Eutrema salsugineum HOM05D004689 ORTHO05D006269 4.6e-110 401.7 231 85.3
A05p13300 Brassica napus HOM05D004689 ORTHO05D006269 6.0e-110 401.4 222 86.9
BraA05t20271Z Brassica rapa HOM05D004689 ORTHO05D006269 6.0e-110 401.4 222 86.9
AagrBONN_evm.TU.Sc2ySwM_344.454 Anthoceros agrestis HOM05D004689 ORTHO05D006269 7.8e-110 401.0 236 84.7
Cc06_g04560 Coffea canephora HOM05D004689 ORTHO05D006269 5.1e-109 398.3 300 71.3
Zm00001eb398100 Zea mays HOM05D004689 ORTHO05D006269 8.6e-109 397.5 241 82.2
CBR_g54837 Chara braunii HOM05D004689 ORTHO05D006269 1.9e-108 396.4 247 79.8
Pp3c15_8160 Physcomitrium patens HOM05D004689 ORTHO05D006269 2.5e-108 396.0 216 88.9
Mapoly0069s0004 Marchantia polymorpha HOM05D004689 ORTHO05D006269 6.2e-107 391.3 226 85.0
Os03g0263500 Oryza sativa ssp. japonica HOM05D004689 ORTHO05D006269 1.8e-106 389.8 233 80.3
Pp3c9_13030 Physcomitrium patens HOM05D004689 ORTHO05D006269 1.8e-106 389.8 258 77.1
Zm00001eb011590 Zea mays HOM05D004689 ORTHO05D006269 3.8e-104 382.1 241 79.7
Sabra06G0095500 Salix brachista HOM05D004689 ORTHO05D006269 8.4e-104 380.9 309 66.3
MD04G1088800 Malus domestica HOM05D004689 ORTHO05D006269 5.4e-103 378.3 208 90.9
SMO228G0117 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 1.6e-99 366.7 245 76.7
CAN.G1038.16 Capsicum annuum HOM05D004689 ORTHO05D006269 4.2e-95 352.1 198 85.9
Carub.0007s3257 Capsella rubella HOM05D004689 ORTHO05D006269 4.3e-92 342.0 215 78.1
AagrBONN_evm.TU.Sc2ySwM_344.3364 Anthoceros agrestis HOM05D004689 ORTHO05D006269 4.8e-91 338.6 181 92.3
MCO12G316 Micromonas commoda HOM05D004689 ORTHO05D006269 5.8e-89 331.6 229 72.5
Cre06.g252700 Chlamydomonas reinhardtii HOM05D004689 ORTHO05D006269 5.4e-87 325.1 208 76.0
Psat1g060440 Pisum sativum HOM05D004689 ORTHO05D006269 7.9e-86 321.2 342 53.8
Prupe.4G071900 Prunus persica HOM05D004689 ORTHO05D006269 2.1e-83 313.2 254 68.1
Manes.09G064318 Manihot esculenta HOM05D004689 ORTHO05D006269 1.1e-79 300.8 178 85.4
vmacro08797 Vaccinium macrocarpon HOM05D004689 ORTHO05D006269 4.6e-78 295.4 572 37.2
PRCOL_00004335 Prasinoderma coloniale HOM05D004689 ORTHO05D006269 2.1e-75 286.6 218 64.2
Cpa.g.sc87.109 Carica papaya HOM05D004689 ORTHO05D006269 1.4e-74 283.9 234 65.4
SHI12393 Sapria himalayana HOM05D004689 ORTHO05D006269 1.4e-74 283.9 267 63.3
FvH4_6g16880 Fragaria vesca HOM05D004689 ORTHO05D006269 1.3e-72 277.3 164 84.1
Haze_26764 Corylus avellana HOM05D004689 ORTHO05D006269 1.9e-71 273.5 189 70.9
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 1.6e-70 270.4 213 68.1
Dinv35815 Davidia involucrata HOM05D004689 ORTHO05D006269 1.4e-66 257.3 151 86.1
Dinv37340 Davidia involucrata HOM05D004689 ORTHO05D006269 1.6e-62 243.8 132 90.9
AUR62043425 Chenopodium quinoa HOM05D004689 ORTHO05D006269 1.7e-59 233.8 220 58.2
Haze_19437 Corylus avellana HOM05D004689 ORTHO05D006269 6.3e-59 231.9 138 82.6
BcaB02g10459 Brassica carinata HOM05D004689 ORTHO05D006269 8.5e-56 221.5 189 63.5
SEGI_10194 Sequoiadendron giganteum HOM05D004689 ORTHO05D006269 1.5e-52 210.7 127 81.1
ATR0118G008 Amborella trichopoda HOM05D004689 ORTHO05D006269 2.0e-52 210.3 108 95.4
AUR62043819 Chenopodium quinoa HOM05D004689 ORTHO05D006269 3.3e-52 209.5 108 91.7
MBI17_g39322_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 4.4e-52 209.1 106 95.3
VMungo0219G0001 Vigna mungo HOM05D004689 ORTHO05D006269 1.7e-51 207.2 106 95.3
Actinidia31313 Actinidia chinensis HOM05D004689 ORTHO05D006269 2.4e-50 203.4 102 96.1
Haze_05755 Corylus avellana HOM05D004689 ORTHO05D006269 1.4e-47 194.1 141 72.3
TAR636G1083 Trochodendron aralioides HOM05D004689 ORTHO05D006269 1.9e-47 193.7 106 87.7
Nitab4.5_0000349g0010 Nicotiana tabacum HOM05D004689 ORTHO05D006269 2.5e-47 193.4 106 89.6
Nitab4.5_0002373g0090 Nicotiana tabacum HOM05D004689 ORTHO05D006269 2.3e-45 186.8 112 81.2
MBI17_g39319_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 2.0e-44 183.7 109 80.7
SMO031G0002 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 5.7e-44 182.2 92 94.6
ATR0118G005 Amborella trichopoda HOM05D004689 ORTHO05D006269 1.4e-42 177.6 87 95.4
Cc00_g23430 Coffea canephora HOM05D004689 ORTHO05D006269 1.4e-42 177.6 95 92.6
Cc00_g35330 Coffea canephora HOM05D004689 ORTHO05D006269 1.2e-41 174.5 95 91.6
AagrBONN_evm.TU.Sc2ySwM_344.3466 Anthoceros agrestis HOM05D004689 ORTHO05D006269 6.5e-40 168.7 139 64.7
Psat0s2549g0120 Pisum sativum HOM05D004689 ORTHO05D006269 3.8e-32 142.9 83 81.9
Haze_06063 Corylus avellana HOM05D004689 ORTHO05D023802 5.0e-32 142.5 105 69.5
Psat1g060480 Pisum sativum HOM05D004689 ORTHO05D006269 2.7e-30 136.7 71 90.1
Psat1g060520 Pisum sativum HOM05D004689 ORTHO05D006269 2.7e-30 136.7 71 90.1
Nitab4.5_0000349g0040 Nicotiana tabacum HOM05D004689 ORTHO05D006269 5.2e-21 105.9 93 65.6
Psat1g060600 Pisum sativum HOM05D004689 ORTHO05D006269 1.7e-19 100.9 58 82.8
Pp3c4_2800 Physcomitrium patens HOM05D004689 ORTHO05D006269 7.0e-18 95.5 119 52.9
Haze_13658 Corylus avellana HOM05D004689 ORTHO05D023802 9.5e-15 85.1 78 60.3
Dinv44323 Davidia involucrata HOM05D004689 ORTHO05D183653 4.1e-10 69.7 38 89.5
Dinv25427 Davidia involucrata HOM05D004689 ORTHO05D182071 7.0e-10 68.9 38 86.8
Psat4g215720 Pisum sativum HOM05D002324 ORTHO05D002380 7.8e-09 65.5 103 44.7
Haze_08899 Corylus avellana HOM05D004689 ORTHO05D165887 3.3e-07 60.1 64 53.1
Dinv29092 Davidia involucrata HOM05D004689 ORTHO05D185927 4.3e-07 59.7 45 64.4


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