Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4682 Ceratophyllum demersum HOM05D004256 ORTHO05D005224 3.9e-165 584.7 292 100.0
TAR627G0580 Trochodendron aralioides HOM05D004256 ORTHO05D005224 5.7e-76 288.5 272 53.7
MBI02_g25367_MAGBIO Magnolia biondii HOM05D004256 ORTHO05D005224 7.0e-74 281.6 273 52.7
Nn2g15522 Nelumbo nucifera HOM05D004256 ORTHO05D005224 2.6e-68 263.1 262 52.7
GSVIVG01021670001 Vitis vinifera HOM05D004256 ORTHO05D005224 5.8e-68 261.9 262 50.4
CSS0013637 Camellia sinensis var. sinensis HOM05D004256 ORTHO05D005224 2.2e-67 260.0 259 50.2
TWI38G1119 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 1.4e-66 257.3 273 47.6
Lj1A1161T63 Lonicera japonica HOM05D004256 ORTHO05D005224 2.4e-66 256.5 264 47.3
Dinv16826 Davidia involucrata HOM05D004256 ORTHO05D005224 5.4e-66 255.4 275 49.8
Sed0001829 Sechium edule HOM05D004256 ORTHO05D005224 2.0e-65 253.4 263 49.0
Actinidia31384 Actinidia chinensis HOM05D004256 ORTHO05D005224 2.3e-64 250.0 263 49.0
COL.COLO4_26853 Corchorus olitorius HOM05D004256 ORTHO05D005224 3.9e-64 249.2 278 47.1
Manes.06G068000 Manihot esculenta HOM05D004256 ORTHO05D005224 3.9e-64 249.2 265 47.9
Aqoxy5G02462 Aquilegia oxysepala HOM05D004256 ORTHO05D005224 8.6e-64 248.1 275 48.7
TWI63G0578 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 1.1e-63 247.7 264 48.1
CAN.G79.16 Capsicum annuum HOM05D004256 ORTHO05D005224 2.5e-63 246.5 273 44.0
Prupe.4G091400 Prunus persica HOM05D004256 ORTHO05D005224 4.3e-63 245.7 260 48.1
Dinv11058 Davidia involucrata HOM05D004256 ORTHO05D005224 7.3e-63 245.0 268 46.3
MD05G1271600 Malus domestica HOM05D004256 ORTHO05D005224 7.3e-63 245.0 273 46.5
THA.LOC104812246 Tarenaya hassleriana HOM05D004256 ORTHO05D005224 9.5e-63 244.6 264 47.7
MELO3C002826.2 Cucumis melo HOM05D004256 ORTHO05D005224 2.1e-62 243.4 263 47.1
Solyc02g070030.4 Solanum lycopersicum HOM05D004256 ORTHO05D005224 2.1e-62 243.4 263 45.2
Gohir.D06G123900 Gossypium hirsutum HOM05D004256 ORTHO05D005224 2.8e-62 243.0 274 46.4
Gorai.010G144100 Gossypium raimondii HOM05D004256 ORTHO05D005224 2.8e-62 243.0 274 46.4
Sopen02g019190 Solanum pennellii HOM05D004256 ORTHO05D005224 2.8e-62 243.0 263 45.6
Aa31LG6G2980 Aethionema arabicum HOM05D004256 ORTHO05D005224 6.2e-62 241.9 262 46.2
Gohir.A06G119600 Gossypium hirsutum HOM05D004256 ORTHO05D005224 3.1e-61 239.6 274 46.7
PSO675G2772 Papaver somniferum HOM05D004256 ORTHO05D005224 6.8e-61 238.4 257 48.6
Nitab4.5_0001583g0180 Nicotiana tabacum HOM05D004256 ORTHO05D005224 8.9e-61 238.0 277 43.3
Thecc.06G004200 Theobroma cacao HOM05D004256 ORTHO05D005224 1.5e-60 237.3 273 44.7
CiPaw.09G142400 Carya illinoinensis HOM05D004256 ORTHO05D005224 3.4e-60 236.1 278 46.0
ClCG03G008210 Citrullus lanatus HOM05D004256 ORTHO05D005224 7.5e-60 235.0 264 46.2
Peaxi162Scf00670g00215 Petunia axillaris HOM05D004256 ORTHO05D005224 7.5e-60 235.0 263 43.7
Sp7g19000 Schrenkiella parvula HOM05D004256 ORTHO05D005224 7.5e-60 235.0 262 43.9
Potri.001G465500 Populus trichocarpa HOM05D004256 ORTHO05D005224 9.8e-60 234.6 265 46.4
Rhsim02G0162800 Rhododendron simsii HOM05D004256 ORTHO05D005224 9.8e-60 234.6 264 47.7
Duzib192G0446 Durio zibethinus HOM05D004256 ORTHO05D005224 1.3e-59 234.2 274 44.9
MD10G1252200 Malus domestica HOM05D004256 ORTHO05D005224 1.3e-59 234.2 273 45.1
CsaV3_1G037200 Cucumis sativus L. HOM05D004256 ORTHO05D005224 1.7e-59 233.8 264 46.6
AL7G33240 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 2.2e-59 233.4 261 43.3
Atru.chr10.795 Acer truncatum HOM05D004256 ORTHO05D005224 3.7e-59 232.6 273 45.4
QL05p062735 Quercus lobata HOM05D004256 ORTHO05D005224 1.9e-58 230.3 266 44.7
Sabra16G0315900 Salix brachista HOM05D004256 ORTHO05D005224 2.4e-58 229.9 265 46.4
Cc09_g07800 Coffea canephora HOM05D004256 ORTHO05D005224 3.2e-58 229.6 263 44.9
Nitab4.5_0001225g0210 Nicotiana tabacum HOM05D004256 ORTHO05D005224 4.1e-58 229.2 277 42.2
arahy.Tifrunner.gnm1.ann1.71MGM7 Arachis hypogaea HOM05D004256 ORTHO05D005224 9.2e-58 228.0 274 43.4
Thhalv10024326m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 9.2e-58 228.0 262 42.7
Carub.0007s2052 Capsella rubella HOM05D004256 ORTHO05D005224 1.2e-57 227.6 262 43.1
CARHR227470 Cardamine hirsuta HOM05D004256 ORTHO05D005224 2.1e-57 226.9 262 42.4
RcHm_v2.0_Chr5g0016471 Rosa chinensis HOM05D004256 ORTHO05D005224 2.7e-57 226.5 288 42.7
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 3.5e-57 226.1 274 43.1
Glyma.05G126600 Glycine max HOM05D004256 ORTHO05D005224 4.6e-57 225.7 273 44.0
Sc17g0004590 Simmondsia chinensis HOM05D004256 ORTHO05D005224 4.6e-57 225.7 272 44.1
TPR.G30378 Trifolium pratense HOM05D004256 ORTHO05D005224 4.6e-57 225.7 274 44.9
BraA01t01176Z Brassica rapa HOM05D004256 ORTHO05D005224 6.0e-57 225.3 262 42.4
Ciclev10014179m.g Citrus clementina HOM05D004256 ORTHO05D005224 1.0e-56 224.6 259 47.5
PGR031G3593 Punica granatum HOM05D004256 ORTHO05D005224 1.0e-56 224.6 273 44.3
SalBow7G4118 Salvia bowleyana HOM05D004256 ORTHO05D005224 1.7e-56 223.8 266 43.6
AT4G20910 Arabidopsis thaliana HOM05D004256 ORTHO05D005224 5.1e-56 222.2 263 43.0
Ca_18290_v3 Cicer arietinum L. HOM05D004256 ORTHO05D005224 5.1e-56 222.2 274 44.9
FvH4_3g10230 Fragaria vesca HOM05D004256 ORTHO05D005224 5.1e-56 222.2 288 42.7
FAN11G3535 Fragaria x ananassa HOM05D004256 ORTHO05D005224 5.1e-56 222.2 288 42.7
Migut.H01323 Erythranthe guttata HOM05D004256 ORTHO05D005224 6.6e-56 221.9 276 43.8
BolC1t01426H Brassica oleracea HOM05D004256 ORTHO05D005224 1.5e-55 220.7 262 40.8
Cfa004790 Carpinus fangiana HOM05D004256 ORTHO05D005224 2.5e-55 219.9 263 44.1
Oeu021898.3 Olea europaea HOM05D004256 ORTHO05D005224 3.3e-55 219.5 272 43.8
Os07g0164000 Oryza sativa ssp. japonica HOM05D004256 ORTHO05D005224 3.3e-55 219.5 262 44.3
AUR62034030 Chenopodium quinoa HOM05D004256 ORTHO05D005224 9.5e-55 218.0 264 43.2
Lalb_Chr12g0208801 Lupinus albus HOM05D004256 ORTHO05D005224 9.5e-55 218.0 263 42.6
FAN16G0878 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.2e-54 217.6 288 42.0
FAN21G3884 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.2e-54 217.6 288 42.0
Medtr4g094545 Medicago truncatula HOM05D004256 ORTHO05D005224 1.2e-54 217.6 274 43.8
CANSAT35G1931 Cannabis sativa HOM05D004256 ORTHO05D005224 1.6e-54 217.2 278 42.4
AUR62043099 Chenopodium quinoa HOM05D004256 ORTHO05D005224 2.1e-54 216.9 264 43.6
Glyma.08G081600 Glycine max HOM05D004256 ORTHO05D005224 2.1e-54 216.9 263 42.6
Haze_10384 Corylus avellana HOM05D004256 ORTHO05D005224 2.8e-54 216.5 283 42.8
Haze_10386 Corylus avellana HOM05D004256 ORTHO05D005224 2.8e-54 216.5 283 42.8
Psat7g093560 Pisum sativum HOM05D004256 ORTHO05D005224 4.7e-54 215.7 263 44.1
ECA236G4703 Erigeron canadensis HOM05D004256 ORTHO05D005224 1.4e-53 214.2 262 43.9
SGA_v2.0_scaffold106G30680 Striga asiatica HOM05D004256 ORTHO05D005224 3.1e-53 213.0 274 41.6
Ah.14g086130 Amaranthus hybridus HOM05D004256 ORTHO05D005224 4.0e-53 212.6 265 44.2
HanXRQChr04g0117221 Helianthus annuus HOM05D004256 ORTHO05D005224 4.0e-53 212.6 264 43.9
Lj4g0013937 Lotus japonicus HOM05D004256 ORTHO05D005224 4.0e-53 212.6 267 42.7
Phvul.002G198200 Phaseolus vulgaris HOM05D004256 ORTHO05D005224 5.2e-53 212.2 273 41.4
DCAR_003847 Daucus carota HOM05D004256 ORTHO05D005224 1.5e-52 210.7 264 45.1
HPP92_009410 Vanilla planifolia HOM05D004256 ORTHO05D005224 5.8e-52 208.8 272 41.2
EL10Ac8g19544 Beta vulgaris HOM05D004256 ORTHO05D005224 9.9e-52 208.0 265 43.0
Zm00001eb300700 Zea mays HOM05D004256 ORTHO05D005224 2.2e-51 206.8 260 42.3
AL7G33230 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 6.4e-51 205.3 267 42.7
FAN13G2402 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.9e-50 203.8 280 42.5
BolC1t01427H Brassica oleracea HOM05D004256 ORTHO05D005224 3.2e-50 203.0 268 41.8
Eucgr.K01946 Eucalyptus grandis HOM05D004256 ORTHO05D005224 3.2e-50 203.0 263 43.7
Potri.011G163600 Populus trichocarpa HOM05D004256 ORTHO05D005224 3.2e-50 203.0 264 42.4
BraA01t01177Z Brassica rapa HOM05D004256 ORTHO05D005224 5.4e-50 202.2 267 41.9
BcaC09g51292 Brassica carinata HOM05D004256 ORTHO05D005224 9.2e-50 201.4 266 42.1
FAN04G0519 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.2e-49 201.1 289 41.2
Lalb_Chr13g0291451 Lupinus albus HOM05D004256 ORTHO05D005224 2.1e-49 200.3 274 39.8
C01p14740 Brassica napus HOM05D004256 ORTHO05D005224 4.6e-49 199.1 266 41.7
FAN18G3233 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.7e-48 197.2 341 35.8
AT4G20920 Arabidopsis thaliana HOM05D004256 ORTHO05D005224 2.3e-48 196.8 267 41.9
Carub.0007s2051 Capsella rubella HOM05D004256 ORTHO05D005224 3.0e-48 196.4 264 42.0
BcaNung04718 Brassica carinata HOM05D004256 ORTHO05D005224 6.6e-48 195.3 265 39.2
BolC1t01428H Brassica oleracea HOM05D004256 ORTHO05D005224 2.5e-47 193.4 271 40.2
BraA01t01178Z Brassica rapa HOM05D004256 ORTHO05D005224 9.6e-47 191.4 271 39.9
A01p12320 Brassica napus HOM05D004256 ORTHO05D005224 1.6e-46 190.7 288 38.2
C01p14750 Brassica napus HOM05D004256 ORTHO05D005224 2.8e-46 189.9 268 40.3
BcaC09g51291 Brassica carinata HOM05D004256 ORTHO05D005224 3.6e-46 189.5 267 40.4
FAN25G0985 Fragaria x ananassa HOM05D004256 ORTHO05D005224 8.1e-46 188.3 221 45.7
Lsat_1_v5_gn_7_34341 Lactuca sativa HOM05D004256 ORTHO05D005224 2.4e-45 186.8 262 40.5
CARHR227480 Cardamine hirsuta HOM05D004256 ORTHO05D005224 1.1e-42 177.9 274 37.2
Thhalv10024347m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 3.2e-42 176.4 266 38.3
BcaC01g00730 Brassica carinata HOM05D004256 ORTHO05D005224 8.7e-40 168.3 197 44.2
FAN08G1809 Fragaria x ananassa HOM05D004256 ORTHO05D005224 8.7e-40 168.3 280 37.9
BcaC09g51293 Brassica carinata HOM05D004256 ORTHO05D005224 8.4e-35 151.8 222 36.0
Cpa.g.sc166.41 Carica papaya HOM05D004256 ORTHO05D007693 7.9e-33 145.2 185 42.7
BcaB03g11710 Brassica carinata HOM05D004256 ORTHO05D005224 1.9e-31 140.6 268 32.5
Eucgr.L00874 Eucalyptus grandis HOM05D004256 ORTHO05D005224 2.5e-31 140.2 188 41.0
Mapoly0004s0071 Marchantia polymorpha HOM05D004256 ORTHO05D005224 5.3e-29 132.5 280 32.9
FAN18G2742 Fragaria x ananassa HOM05D004256 ORTHO05D005224 7.6e-28 128.6 326 30.1
ATR1098G117 Amborella trichopoda HOM05D004256 ORTHO05D005224 9.9e-28 128.3 154 45.5
Oeu014331.2 Olea europaea HOM05D004256 ORTHO05D005224 7.9e-25 118.6 153 40.5
VMungo0251G1323 Vigna mungo HOM05D004256 ORTHO05D005224 6.7e-24 115.5 172 36.6
unitig_0.g923 Utricularia gibba HOM05D004256 ORTHO05D005224 1.9e-23 114.0 156 37.8
Pp3c1_60 Physcomitrium patens HOM05D004256 ORTHO05D005224 2.1e-22 110.5 242 29.8
FvH4_5g29180 Fragaria vesca HOM05D004256 ORTHO05D005224 1.9e-18 97.4 91 53.8
VMungo0251G1407 Vigna mungo HOM05D004256 ORTHO05D005224 4.6e-17 92.8 81 54.3
BcaC06g34131 Brassica carinata HOM05D004256 ORTHO05D005224 8.7e-16 88.6 128 38.3
BcaC08g44368 Brassica carinata HOM05D004256 ORTHO05D005224 8.7e-16 88.6 154 35.1
Haze_01153 Corylus avellana HOM05D004256 ORTHO05D005224 1.3e-14 84.7 151 37.1
BcaC04g20971 Brassica carinata HOM05D004256 ORTHO05D005224 6.3e-14 82.4 154 33.8
AagrBONN_evm.TU.Sc2ySwM_117.1656 Anthoceros agrestis HOM05D004256 ORTHO05D005224 9.0e-13 78.6 169 32.0
Haze_10375 Corylus avellana HOM05D004256 ORTHO05D005224 4.5e-12 76.3 165 33.9
BcaNung04717 Brassica carinata HOM05D004256 ORTHO05D005224 1.3e-11 74.7 186 30.6
PGSC0003DMG400021115 Solanum tuberosum HOM05D004256 ORTHO05D005224 1.3e-11 74.7 103 40.8
BcaC02g08729 Brassica carinata HOM05D004256 ORTHO05D021760 3.6e-09 66.6 115 33.9
HanXRQChr04g0117231 Helianthus annuus HOM05D004256 ORTHO05D005224 1.0e-08 65.1 91 38.5
Haze_10382 Corylus avellana HOM05D004256 ORTHO05D005224 5.1e-08 62.8 91 39.6
Sp7g19005 Schrenkiella parvula HOM05D004256 ORTHO05D005224 1.5e-07 61.2 93 38.7
BolC1t01694H Brassica oleracea HOM05D004256 ORTHO05D021760 1.6e-06 57.8 124 31.5
C01p17580 Brassica napus HOM05D004256 ORTHO05D005224 2.2e-06 57.4 124 30.6
BolC6t37010H Brassica oleracea HOM05D004256 ORTHO05D005224 4.8e-06 56.2 106 31.1


User provided reference genes

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