Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4446 Ceratophyllum demersum HOM05D002931 ORTHO05D003273 0.0e+00 1095.5 562 100.0
CDE04G2689 Ceratophyllum demersum HOM05D002931 ORTHO05D003273 2.5e-261 905.2 564 84.8
MBI06_g12324_MAGBIO Magnolia biondii HOM05D002931 ORTHO05D003273 3.2e-43 180.6 670 30.9
PSO063G4393 Papaver somniferum HOM05D002931 ORTHO05D003273 9.8e-40 169.1 596 32.6
Cfa021253 Carpinus fangiana HOM05D002931 ORTHO05D003273 3.7e-39 167.2 490 35.9
QL03p041904 Quercus lobata HOM05D002931 ORTHO05D003273 2.4e-38 164.5 584 34.2
Dinv06218 Davidia involucrata HOM05D002931 ORTHO05D003273 5.9e-37 159.8 522 33.7
CiPaw.06G057100 Carya illinoinensis HOM05D002931 ORTHO05D003273 1.0e-36 159.1 486 34.6
PSO782G2514 Papaver somniferum HOM05D002931 ORTHO05D003273 1.9e-35 154.8 594 32.7
TAR629G2161 Trochodendron aralioides HOM05D002931 ORTHO05D003273 4.3e-35 153.7 637 31.2
MBI03_g42615_MAGBIO Magnolia biondii HOM05D002931 ORTHO05D003273 5.6e-35 153.3 633 31.3
Nn4g24879 Nelumbo nucifera HOM05D002931 ORTHO05D003273 2.1e-34 151.4 513 32.2
Eucgr.G02557 Eucalyptus grandis HOM05D002931 ORTHO05D003273 2.8e-34 151.0 498 33.5
Actinidia12422 Actinidia chinensis HOM05D002931 ORTHO05D003273 8.0e-34 149.4 462 35.3
MD16G1008200 Malus domestica HOM05D002931 ORTHO05D003273 3.0e-33 147.5 531 32.6
Haze_01567 Corylus avellana HOM05D002931 ORTHO05D003273 5.2e-33 146.7 505 33.3
ATR0618G305 Amborella trichopoda HOM05D002931 ORTHO05D003273 8.9e-33 146.0 554 32.1
Nitab4.5_0007973g0010 Nicotiana tabacum HOM05D002931 ORTHO05D003273 2.0e-32 144.8 598 31.9
PGSC0003DMG400031374 Solanum tuberosum HOM05D002931 ORTHO05D003273 3.4e-32 144.1 538 31.2
Sabra08G0109200 Salix brachista HOM05D002931 ORTHO05D003273 2.2e-31 141.4 510 33.5
CsaV3_5G012550 Cucumis sativus L. HOM05D002931 ORTHO05D003273 2.9e-31 141.0 619 30.4
Prupe.1G342700 Prunus persica HOM05D002931 ORTHO05D003273 6.4e-31 139.8 473 35.3
Aqoxy3G04227 Aquilegia oxysepala HOM05D002931 ORTHO05D003273 1.4e-30 138.7 618 29.4
Glyma.08G091000 Glycine max HOM05D002931 ORTHO05D003273 2.4e-30 137.9 482 33.6
arahy.Tifrunner.gnm1.ann1.FAG6RL Arachis hypogaea HOM05D002931 ORTHO05D003273 1.6e-29 135.2 466 33.0
CANSAT64G0742 Cannabis sativa HOM05D002931 ORTHO05D003273 1.6e-29 135.2 614 30.8
Manes.07G081000 Manihot esculenta HOM05D002931 ORTHO05D003273 2.7e-29 134.4 600 30.5
PGR031G0955 Punica granatum HOM05D002931 ORTHO05D003273 2.7e-29 134.4 325 37.8
MELO3C022593.2 Cucumis melo HOM05D002931 ORTHO05D003273 4.6e-29 133.7 636 29.7
Ciclev10004417m.g Citrus clementina HOM05D002931 ORTHO05D003273 5.9e-29 133.3 597 30.7
Nn3g18713 Nelumbo nucifera HOM05D002931 ORTHO05D003273 5.9e-29 133.3 340 37.4
Dinv28150 Davidia involucrata HOM05D002931 ORTHO05D003273 7.8e-29 132.9 625 31.8
VMungo0251G1797 Vigna mungo HOM05D002931 ORTHO05D003273 7.8e-29 132.9 587 30.5
RcHm_v2.0_Chr7g0176801 Rosa chinensis HOM05D002931 ORTHO05D003273 1.0e-28 132.5 650 30.9
arahy.Tifrunner.gnm1.ann1.QW19KK Arachis hypogaea HOM05D002931 ORTHO05D003273 2.3e-28 131.3 469 32.2
Thecc.02G296000 Theobroma cacao HOM05D002931 ORTHO05D003273 2.3e-28 131.3 643 31.1
Ca_18209_v3 Cicer arietinum L. HOM05D002931 ORTHO05D003273 3.0e-28 131.0 602 29.7
Phvul.002G186300 Phaseolus vulgaris HOM05D002931 ORTHO05D003273 5.0e-28 130.2 624 29.3
FAN04G1136 Fragaria x ananassa HOM05D002931 ORTHO05D003273 6.6e-28 129.8 634 30.8
ClCG11G000800 Citrullus lanatus HOM05D002931 ORTHO05D003273 8.6e-28 129.4 621 30.3
Sc16g0002250 Simmondsia chinensis HOM05D002931 ORTHO05D003273 1.1e-27 129.0 570 30.0
DCAR_023511 Daucus carota HOM05D002931 ORTHO05D003273 1.9e-27 128.3 591 29.8
DCAR_030328 Daucus carota HOM05D002931 ORTHO05D003273 3.3e-27 127.5 645 29.1
Sc16g0002210 Simmondsia chinensis HOM05D002931 ORTHO05D003273 4.3e-27 127.1 572 30.2
Ah.02g120060 Amaranthus hybridus HOM05D002931 ORTHO05D003273 5.6e-27 126.7 497 32.0
Atru.chr11.1047 Acer truncatum HOM05D002931 ORTHO05D003273 1.2e-26 125.6 640 29.7
Manes.10G063900 Manihot esculenta HOM05D002931 ORTHO05D003273 1.2e-26 125.6 628 31.5
Sed0006180 Sechium edule HOM05D002931 ORTHO05D003273 1.2e-26 125.6 470 32.8
FAN08G0794 Fragaria x ananassa HOM05D002931 ORTHO05D003273 1.6e-26 125.2 639 30.7
Potri.008G144200 Populus trichocarpa HOM05D002931 ORTHO05D003273 1.6e-26 125.2 650 28.8
COL.COLO4_27513 Corchorus olitorius HOM05D002931 ORTHO05D003273 3.6e-26 124.0 588 31.0
FvH4_5g18690 Fragaria vesca HOM05D002931 ORTHO05D003273 8.0e-26 122.9 637 29.8
Sopen04g003710 Solanum pennellii HOM05D002931 ORTHO05D003273 8.0e-26 122.9 541 29.9
Duzib248G0685 Durio zibethinus HOM05D002931 ORTHO05D003273 1.0e-25 122.5 620 29.7
Gorai.002G167900 Gossypium raimondii HOM05D002931 ORTHO05D003273 1.0e-25 122.5 629 30.5
Peaxi162Scf00329g00939 Petunia axillaris HOM05D002931 ORTHO05D003273 1.4e-25 122.1 595 30.9
Hund04302 Selenicereus undatus HOM05D002931 ORTHO05D003273 2.3e-25 121.3 621 30.4
vmacro10786 Vaccinium macrocarpon HOM05D002931 ORTHO05D003273 3.1e-25 120.9 483 33.5
CSS0049784 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 4.0e-25 120.6 455 33.2
Lalb_Chr12g0209231 Lupinus albus HOM05D002931 ORTHO05D003273 2.0e-24 118.2 648 29.9
Glyma.05G135800 Glycine max HOM05D002931 ORTHO05D003273 3.4e-24 117.5 639 28.5
Lj4g0006208 Lotus japonicus HOM05D002931 ORTHO05D003273 3.4e-24 117.5 635 28.7
FAN13G0683 Fragaria x ananassa HOM05D002931 ORTHO05D003273 4.4e-24 117.1 634 29.0
Oeu044053.1 Olea europaea HOM05D002931 ORTHO05D003273 5.8e-24 116.7 504 30.8
THA.LOC104824107 Tarenaya hassleriana HOM05D002931 ORTHO05D003273 5.8e-24 116.7 466 31.8
Sabra10G0070700 Salix brachista HOM05D002931 ORTHO05D003273 7.5e-24 116.3 573 30.5
CAN.G458.3 Capsicum annuum HOM05D002931 ORTHO05D003273 1.3e-23 115.5 506 30.8
Nitab4.5_0000129g0420 Nicotiana tabacum HOM05D002931 ORTHO05D003273 2.9e-23 114.4 519 30.1
Duzib268G1680 Durio zibethinus HOM05D002931 ORTHO05D003273 4.9e-23 113.6 639 29.0
Lj6C725G8 Lonicera japonica HOM05D002931 ORTHO05D003273 6.4e-23 113.2 537 30.9
Lsat_1_v5_gn_4_26121 Lactuca sativa HOM05D002931 ORTHO05D003273 8.3e-23 112.8 449 32.3
Lalb_Chr07g0188071 Lupinus albus HOM05D002931 ORTHO05D003273 1.4e-22 112.1 648 29.2
Ah.03g147130 Amaranthus hybridus HOM05D002931 ORTHO05D003273 1.9e-22 111.7 494 31.4
Duzib251G0035 Durio zibethinus HOM05D002931 ORTHO05D003273 1.9e-22 111.7 474 32.1
FAN18G3391 Fragaria x ananassa HOM05D002931 ORTHO05D003273 3.2e-22 110.9 637 29.2
Migut.E00661 Erythranthe guttata HOM05D002931 ORTHO05D003273 7.0e-22 109.8 513 29.2
Gohir.D01G138200 Gossypium hirsutum HOM05D002931 ORTHO05D003273 2.0e-21 108.2 629 28.8
EL10Ac6g15402 Beta vulgaris HOM05D002931 ORTHO05D003273 3.5e-21 107.5 284 36.3
SalBow2G2773 Salvia bowleyana HOM05D002931 ORTHO05D003273 6.0e-21 106.7 488 30.3
Potri.010G098200 Populus trichocarpa HOM05D002931 ORTHO05D003273 7.8e-21 106.3 664 28.8
THA.LOC104824102 Tarenaya hassleriana HOM05D002931 ORTHO05D003273 2.3e-20 104.8 349 32.4
Sopen01g003710 Solanum pennellii HOM05D002931 ORTHO05D003273 3.0e-20 104.4 454 31.3
Gohir.A01G145836 Gossypium hirsutum HOM05D002931 ORTHO05D003273 3.9e-20 104.0 609 29.6
Solyc01g008170.3 Solanum lycopersicum HOM05D002931 ORTHO05D003273 5.0e-20 103.6 571 29.6
TPR.G34760 Trifolium pratense HOM05D002931 ORTHO05D003273 5.0e-20 103.6 631 27.6
AUR62003472 Chenopodium quinoa HOM05D002931 ORTHO05D003273 1.9e-19 101.7 476 30.5
Solyc04g008550.4 Solanum lycopersicum HOM05D002931 ORTHO05D003273 4.3e-19 100.5 534 28.7
HanXRQChr12g0365801 Helianthus annuus HOM05D002931 ORTHO05D003273 9.5e-19 99.4 554 29.1
Nitab4.5_0000069g0600 Nicotiana tabacum HOM05D002931 ORTHO05D003273 2.1e-18 98.2 632 29.3
Nitab4.5_0007743g0010 Nicotiana tabacum HOM05D002931 ORTHO05D003273 2.8e-18 97.8 587 29.6
Oeu006356.1 Olea europaea HOM05D002931 ORTHO05D003273 4.7e-18 97.1 539 28.0
Migut.E00601 Erythranthe guttata HOM05D002931 ORTHO05D003273 6.2e-18 96.7 366 29.8
HPP92_020781 Vanilla planifolia HOM05D009170 ORTHO05D012011 6.2e-18 96.7 321 33.0
DCAR_002632 Daucus carota HOM05D002931 ORTHO05D003273 8.1e-18 96.3 475 29.9
Lalb_Chr13g0293111 Lupinus albus HOM05D002931 ORTHO05D003273 1.4e-17 95.5 617 28.0
Oeu001129.1 Olea europaea HOM05D002931 ORTHO05D003273 2.3e-17 94.7 562 27.9
TWI53G0202 Tripterygium wilfordii HOM05D002931 ORTHO05D003273 8.9e-17 92.8 450 29.8
MSTRG.2079 Avicennia marina HOM05D002931 ORTHO05D003273 1.2e-16 92.4 633 27.5
HanXRQChr08g0225031 Helianthus annuus HOM05D002931 ORTHO05D003273 3.4e-16 90.9 433 31.6
Peaxi162Scf00097g01810 Petunia axillaris HOM05D002931 ORTHO05D003273 4.4e-16 90.5 480 29.8
PGSC0003DMG400016400 Solanum tuberosum HOM05D002931 ORTHO05D003273 1.3e-15 89.0 578 28.2
Cc11_g03200 Coffea canephora HOM05D002931 ORTHO05D003273 2.2e-15 88.2 478 29.5
Os04g0671800 Oryza sativa ssp. japonica HOM05D002931 ORTHO05D003273 4.9e-15 87.0 616 27.1
Sp2g13570 Schrenkiella parvula HOM05D002931 ORTHO05D003273 4.9e-15 87.0 377 30.8
AL5G11440 Arabidopsis lyrata HOM05D002931 ORTHO05D003273 8.3e-15 86.3 621 28.2
CAN.G282.80 Capsicum annuum HOM05D002931 ORTHO05D003273 8.3e-15 86.3 441 30.2
unitig_8.g4031 Utricularia gibba HOM05D002931 ORTHO05D003273 1.1e-14 85.9 463 29.4
Thhalv10003749m.g Eutrema salsugineum HOM05D002931 ORTHO05D003273 1.4e-14 85.5 480 27.5
Carub.0005s0123 Capsella rubella HOM05D002931 ORTHO05D003273 2.4e-14 84.7 549 27.9
AUR62017780 Chenopodium quinoa HOM05D002931 ORTHO05D003273 4.1e-14 84.0 628 26.4
TWI53G1306 Tripterygium wilfordii HOM05D002931 ORTHO05D003273 4.1e-14 84.0 573 27.4
HPP92_014781 Vanilla planifolia HOM05D002931 ORTHO05D003273 2.1e-13 81.6 621 27.5
A02p32680 Brassica napus HOM05D002931 ORTHO05D003273 2.7e-13 81.3 362 30.9
BraA02t08284Z Brassica rapa HOM05D002931 ORTHO05D003273 2.7e-13 81.3 362 30.9
AT2G02160 Arabidopsis thaliana HOM05D002931 ORTHO05D003273 7.8e-13 79.7 312 32.7
BcaC03g17120 Brassica carinata HOM05D002931 ORTHO05D003273 3.0e-12 77.8 395 30.6
Aa31LG2G7780 Aethionema arabicum HOM05D002931 ORTHO05D003273 1.9e-11 75.1 441 28.8
CARHR144830 Cardamine hirsuta HOM05D002931 ORTHO05D003273 4.3e-11 73.9 571 27.1
HanXRQChr16g0526491 Helianthus annuus HOM05D002931 ORTHO05D003273 4.3e-11 73.9 445 27.0
BcaB07g30353 Brassica carinata HOM05D002931 ORTHO05D003273 7.3e-11 73.2 455 29.9
HanXRQChr17g0565571 Helianthus annuus HOM05D002931 ORTHO05D003273 1.2e-10 72.4 553 27.3
C02p50290 Brassica napus HOM05D002931 ORTHO05D003273 1.6e-10 72.0 471 27.8
MSTRG.13667 Avicennia marina HOM05D002931 ORTHO05D003273 2.8e-10 71.2 488 26.6
ECA233G4272 Erigeron canadensis HOM05D002931 ORTHO05D003273 2.8e-10 71.2 463 25.9
ECA233G0143 Erigeron canadensis HOM05D000188 ORTHO05D000362 4.0e-09 67.4 246 30.5
Os02g0831100 Oryza sativa ssp. japonica HOM05D002931 ORTHO05D003273 4.0e-09 67.4 372 27.4
Zm00001eb190610 Zea mays HOM05D002931 ORTHO05D003273 4.0e-09 67.4 474 26.6
SHI04203 Sapria himalayana HOM05D002931 ORTHO05D003273 6.8e-09 66.6 356 30.1
Psat7g086440 Pisum sativum HOM05D002931 ORTHO05D003273 1.5e-08 65.5 313 28.4
Zm00001eb433430 Zea mays HOM05D002931 ORTHO05D003273 7.6e-08 63.2 551 27.8
Lsat_1_v5_gn_8_34141 Lactuca sativa HOM05D002931 ORTHO05D003273 9.9e-08 62.8 338 27.8
BcaB07g30703 Brassica carinata HOM05D002931 ORTHO05D003273 1.7e-07 62.0 172 33.7
BcaC03g17119 Brassica carinata HOM05D002931 ORTHO05D003273 6.4e-07 60.1 334 30.8
BcaB07g30706 Brassica carinata HOM05D002931 ORTHO05D003273 8.4e-07 59.7 422 29.1
HPP92_008712 Vanilla planifolia HOM05D009170 ORTHO05D012011 8.4e-07 59.7 467 27.4
CiPaw.03G242100 Carya illinoinensis HOM05D002931 ORTHO05D003273 1.9e-06 58.5 325 32.0
Lj6C725G9 Lonicera japonica HOM05D002931 ORTHO05D003273 1.9e-06 58.5 152 37.5
unitig_22.g5616 Utricularia gibba HOM05D002931 ORTHO05D003273 7.1e-06 56.6 560 25.4


User provided reference genes

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