Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2445 Ceratophyllum demersum HOM05D004433 ORTHO05D005251 7.1e-75 283.9 146 100.0
CDE09G0966 Ceratophyllum demersum HOM05D004433 ORTHO05D005251 3.1e-38 162.2 95 88.4
TAR639G0002 Trochodendron aralioides HOM05D004433 ORTHO05D005251 5.7e-32 141.4 95 74.7
Atru.chr7.2050 Acer truncatum HOM05D004433 ORTHO05D005251 9.7e-32 140.6 95 74.7
SalBow4G2164 Salvia bowleyana HOM05D004433 ORTHO05D005251 1.3e-31 140.2 94 75.5
ATR0705G146 Amborella trichopoda HOM05D004433 ORTHO05D005251 1.7e-31 139.8 95 73.7
Dinv23396 Davidia involucrata HOM05D004433 ORTHO05D005251 1.7e-31 139.8 95 76.8
Oeu019243.1 Olea europaea HOM05D004433 ORTHO05D005251 1.7e-31 139.8 95 75.8
Migut.A00179 Erythranthe guttata HOM05D004433 ORTHO05D005251 4.8e-31 138.3 95 72.6
Cfa013388 Carpinus fangiana HOM05D004433 ORTHO05D005251 8.2e-31 137.5 95 75.8
SGA_v2.0_scaffold103G30047 Striga asiatica HOM05D004433 ORTHO05D005251 1.8e-30 136.3 95 73.7
Aqoxy5G01364 Aquilegia oxysepala HOM05D004433 ORTHO05D005251 2.4e-30 136.0 95 72.6
MSTRG.25921 Avicennia marina HOM05D004433 ORTHO05D005251 5.3e-30 134.8 95 71.6
Manes.03G060700 Manihot esculenta HOM05D004433 ORTHO05D005251 6.9e-30 134.4 95 72.6
Nn8g39044 Nelumbo nucifera HOM05D004433 ORTHO05D005251 6.9e-30 134.4 95 72.6
CSS0005257 Camellia sinensis var. sinensis HOM05D004433 ORTHO05D005251 2.0e-29 132.9 95 71.6
CSS0005508 Camellia sinensis var. sinensis HOM05D004433 ORTHO05D005251 2.0e-29 132.9 95 71.6
Dinv27935 Davidia involucrata HOM05D004433 ORTHO05D005251 2.0e-29 132.9 95 74.7
Eucgr.C00613 Eucalyptus grandis HOM05D004433 ORTHO05D005251 2.0e-29 132.9 95 71.6
TWI34G1917 Tripterygium wilfordii HOM05D004433 ORTHO05D005251 2.0e-29 132.9 95 72.6
RcHm_v2.0_Chr6g0306701 Rosa chinensis HOM05D004433 ORTHO05D005251 2.6e-29 132.5 95 69.5
DCAR_003083 Daucus carota HOM05D004433 ORTHO05D005251 3.4e-29 132.1 95 69.5
Glyma.17G192300 Glycine max HOM05D004433 ORTHO05D005251 3.4e-29 132.1 95 71.6
Lj7C697T10 Lonicera japonica HOM05D004433 ORTHO05D005251 4.5e-29 131.7 95 67.4
QL12p040912 Quercus lobata HOM05D004433 ORTHO05D005251 4.5e-29 131.7 95 71.6
Actinidia14688 Actinidia chinensis HOM05D004433 ORTHO05D005251 7.7e-29 131.0 95 71.6
CiPaw.08G027400 Carya illinoinensis HOM05D004433 ORTHO05D005251 1.3e-28 130.2 95 70.5
Ca_03360_v3 Cicer arietinum L. HOM05D004433 ORTHO05D005251 1.7e-28 129.8 95 70.5
PGR031G3150 Punica granatum HOM05D004433 ORTHO05D005251 1.7e-28 129.8 95 71.6
CAN.G1444.6 Capsicum annuum HOM05D004433 ORTHO05D005251 2.2e-28 129.4 95 70.5
COL.COLO4_21003 Corchorus olitorius HOM05D004433 ORTHO05D005251 2.2e-28 129.4 132 55.3
ClCG11G015050 Citrullus lanatus HOM05D004433 ORTHO05D005251 3.8e-28 128.6 95 71.6
VMungo1383G1648 Vigna mungo HOM05D004433 ORTHO05D005251 3.8e-28 128.6 95 69.5
GSVIVG01035316001 Vitis vinifera HOM05D004433 ORTHO05D005251 3.8e-28 128.6 91 71.4
Glyma.14G144100 Glycine max HOM05D004433 ORTHO05D005251 5.0e-28 128.3 95 70.5
Lalb_Chr22g0360911 Lupinus albus HOM05D004433 ORTHO05D005251 5.0e-28 128.3 95 70.5
Manes.16G073200 Manihot esculenta HOM05D004433 ORTHO05D005251 5.0e-28 128.3 95 71.6
Sed0005675 Sechium edule HOM05D004433 ORTHO05D005251 5.0e-28 128.3 95 71.6
Os01g0739400 Oryza sativa ssp. japonica HOM05D004433 ORTHO05D005251 6.5e-28 127.9 95 68.4
Sopen08g019860 Solanum pennellii HOM05D004433 ORTHO05D005251 6.5e-28 127.9 95 69.5
TPR.G24519 Trifolium pratense HOM05D004433 ORTHO05D005251 6.5e-28 127.9 95 69.5
Solyc08g066180.3 Solanum lycopersicum HOM05D004433 ORTHO05D005251 8.5e-28 127.5 95 70.5
CsaV3_3G048450 Cucumis sativus L. HOM05D004433 ORTHO05D005251 1.1e-27 127.1 95 70.5
Peaxi162Scf00699g00520 Petunia axillaris HOM05D004433 ORTHO05D005251 1.1e-27 127.1 95 69.5
Lj8A567T31 Lonicera japonica HOM05D004433 ORTHO05D005251 1.4e-27 126.7 94 70.2
Lj1g0025930 Lotus japonicus HOM05D004433 ORTHO05D005251 1.4e-27 126.7 95 68.4
Nitab4.5_0008242g0010 Nicotiana tabacum HOM05D004433 ORTHO05D005251 1.4e-27 126.7 95 68.4
Potri.018G057500 Populus trichocarpa HOM05D004433 ORTHO05D005251 1.4e-27 126.7 95 71.6
AT2G25870 Arabidopsis thaliana HOM05D004433 ORTHO05D005251 1.9e-27 126.3 95 69.5
arahy.Tifrunner.gnm1.ann1.AK26AV Arachis hypogaea HOM05D004433 ORTHO05D005251 1.9e-27 126.3 95 69.5
Carub.0004s0569 Capsella rubella HOM05D004433 ORTHO05D005251 2.5e-27 125.9 95 67.4
Gohir.A06G091200 Gossypium hirsutum HOM05D004433 ORTHO05D005251 2.5e-27 125.9 91 71.4
unitig_32.g11476 Utricularia gibba HOM05D004433 ORTHO05D005251 2.5e-27 125.9 93 71.0
HPP92_005557 Vanilla planifolia HOM05D004433 ORTHO05D005251 2.5e-27 125.9 95 66.3
Duzib168G1809 Durio zibethinus HOM05D004433 ORTHO05D005251 3.2e-27 125.6 91 71.4
FvH4_2g35230 Fragaria vesca HOM05D004433 ORTHO05D005251 3.2e-27 125.6 95 66.3
Sp4g05710 Schrenkiella parvula HOM05D004433 ORTHO05D005251 3.2e-27 125.6 95 67.4
Thecc.09G048300 Theobroma cacao HOM05D004433 ORTHO05D005251 3.2e-27 125.6 91 70.3
CARHR115360 Cardamine hirsuta HOM05D004433 ORTHO05D005251 4.2e-27 125.2 95 68.4
MELO3C003474.2 Cucumis melo HOM05D004433 ORTHO05D005251 4.2e-27 125.2 95 70.5
Thhalv10001936m.g Eutrema salsugineum HOM05D004433 ORTHO05D005251 4.2e-27 125.2 91 71.4
Lsat_1_v5_gn_6_7781 Lactuca sativa HOM05D004433 ORTHO05D005251 4.2e-27 125.2 91 70.3
Phvul.001G078300 Phaseolus vulgaris HOM05D004433 ORTHO05D005251 4.2e-27 125.2 95 68.4
Psat6g036080 Pisum sativum HOM05D004433 ORTHO05D005251 4.2e-27 125.2 95 67.4
Sc23g0005440 Simmondsia chinensis HOM05D004433 ORTHO05D005251 4.2e-27 125.2 95 67.4
BcaB06g29637 Brassica carinata HOM05D004433 ORTHO05D005251 5.5e-27 124.8 95 67.4
BcaB06g29638 Brassica carinata HOM05D004433 ORTHO05D005251 5.5e-27 124.8 95 67.4
A04p20080 Brassica napus HOM05D004433 ORTHO05D005251 5.5e-27 124.8 95 67.4
C04p55760 Brassica napus HOM05D004433 ORTHO05D005251 5.5e-27 124.8 95 67.4
BolC4t27102H Brassica oleracea HOM05D004433 ORTHO05D005251 5.5e-27 124.8 95 67.4
BraA04t17590Z Brassica rapa HOM05D004433 ORTHO05D005251 5.5e-27 124.8 95 67.4
Ciclev10007803m.g Citrus clementina HOM05D004433 ORTHO05D005251 5.5e-27 124.8 91 69.2
FvH4_2g35220 Fragaria vesca HOM05D004433 ORTHO05D005251 5.5e-27 124.8 95 67.4
Nitab4.5_0000318g0140 Nicotiana tabacum HOM05D004433 ORTHO05D005251 5.5e-27 124.8 95 67.4
Prupe.1G444500 Prunus persica HOM05D004433 ORTHO05D005251 5.5e-27 124.8 100 65.0
Aa31LG5G9810 Aethionema arabicum HOM05D004433 ORTHO05D005251 7.2e-27 124.4 95 67.4
FAN15G1676 Fragaria x ananassa HOM05D004433 ORTHO05D005251 7.2e-27 124.4 95 67.4
MBI04_g07004_MAGBIO Magnolia biondii HOM05D004433 ORTHO05D005251 7.2e-27 124.4 95 68.4
Medtr1g007320 Medicago truncatula HOM05D004433 ORTHO05D005251 9.4e-27 124.0 95 67.4
EL10Ac2g03971 Beta vulgaris HOM05D004433 ORTHO05D005251 1.2e-26 123.6 94 67.0
FAN20G2992 Fragaria x ananassa HOM05D004433 ORTHO05D005251 2.1e-26 122.9 93 67.7
FAN27G1484 Fragaria x ananassa HOM05D004433 ORTHO05D005251 2.1e-26 122.9 94 67.0
AUR62040221 Chenopodium quinoa HOM05D004433 ORTHO05D005251 2.7e-26 122.5 91 68.1
Duzib150G0295 Durio zibethinus HOM05D004433 ORTHO05D005251 2.7e-26 122.5 91 69.2
ECA233G5497 Erigeron canadensis HOM05D004433 ORTHO05D005251 2.7e-26 122.5 91 70.3
FAN27G0398 Fragaria x ananassa HOM05D004433 ORTHO05D005251 2.7e-26 122.5 95 65.3
Gohir.D06G090400 Gossypium hirsutum HOM05D004433 ORTHO05D005251 2.7e-26 122.5 91 70.3
AL4G17700 Arabidopsis lyrata HOM05D004433 ORTHO05D005251 3.6e-26 122.1 95 67.4
Gorai.010G104100 Gossypium raimondii HOM05D004433 ORTHO05D005251 3.6e-26 122.1 89 70.8
Prupe.1G444400 Prunus persica HOM05D004433 ORTHO05D005251 3.6e-26 122.1 95 66.3
HanXRQChr02g0047921 Helianthus annuus HOM05D004433 ORTHO05D005251 4.7e-26 121.7 91 71.4
AUR62009222 Chenopodium quinoa HOM05D004433 ORTHO05D005251 6.1e-26 121.3 91 67.0
Rhsim11G0049500 Rhododendron simsii HOM05D004433 ORTHO05D005251 6.1e-26 121.3 106 60.4
RcHm_v2.0_Chr6g0306711 Rosa chinensis HOM05D004433 ORTHO05D005251 6.1e-26 121.3 95 66.3
Zm00001eb153790 Zea mays HOM05D004433 ORTHO05D005251 6.1e-26 121.3 95 65.3
MD08G1110200 Malus domestica HOM05D004433 ORTHO05D005251 7.9e-26 120.9 95 65.3
CANSAT21G1878 Cannabis sativa HOM05D004433 ORTHO05D005251 3.0e-25 119.0 95 66.3
CANSAT21G2561 Cannabis sativa HOM05D004433 ORTHO05D005251 3.0e-25 119.0 95 66.3
THA.LOC104818595 Tarenaya hassleriana HOM05D004433 ORTHO05D005251 3.0e-25 119.0 95 63.2
PSO210G0672 Papaver somniferum HOM05D004433 ORTHO05D005251 3.9e-25 118.6 95 64.2
Hund03376 Selenicereus undatus HOM05D004433 ORTHO05D005251 8.8e-25 117.5 94 63.8
MD08G1110300 Malus domestica HOM05D004433 ORTHO05D005251 1.1e-24 117.1 91 67.0
PSO210G3373 Papaver somniferum HOM05D004433 ORTHO05D005251 1.1e-24 117.1 95 63.2
Ah.10g034740 Amaranthus hybridus HOM05D004433 ORTHO05D005251 2.0e-24 116.3 91 63.7
vmacro00182 Vaccinium macrocarpon HOM05D004433 ORTHO05D005251 3.7e-23 112.1 107 57.0
Os09g0388400 Oryza sativa ssp. japonica HOM05D004433 ORTHO05D005251 3.8e-20 102.1 95 55.8
Actinidia18212 Actinidia chinensis HOM05D004433 ORTHO05D005251 6.5e-20 101.3 95 63.2
Haze_21925 Corylus avellana HOM05D004433 ORTHO05D005251 5.5e-19 98.2 67 77.6
FAN15G3540 Fragaria x ananassa HOM05D004433 ORTHO05D005251 7.2e-19 97.8 98 57.1
Pp3c15_25010 Physcomitrium patens HOM05D004433 ORTHO05D005251 9.4e-19 97.4 95 54.7
MCO02G391 Micromonas commoda HOM05D004433 ORTHO05D005251 3.6e-18 95.5 91 54.9
arahy.Tifrunner.gnm1.ann1.YGB7WG Arachis hypogaea HOM05D004433 ORTHO05D005251 8.0e-18 94.4 70 70.0
Cc08_g09950 Coffea canephora HOM05D004433 ORTHO05D005251 8.8e-17 90.9 67 71.6
SEGI_12418 Sequoiadendron giganteum HOM05D004433 ORTHO05D005251 8.8e-17 90.9 67 68.7
Gohir.A08G152250 Gossypium hirsutum HOM05D004433 ORTHO05D005251 1.1e-16 90.5 72 63.9
Ca_19223_v3 Cicer arietinum L. HOM05D004433 ORTHO05D005251 1.5e-16 90.1 67 68.7
Mapoly0124s0034 Marchantia polymorpha HOM05D004433 ORTHO05D005251 3.3e-16 89.0 95 51.6
SMO352G0038 Selaginella moellendorffii HOM05D004433 ORTHO05D005251 4.4e-16 88.6 90 50.0
ATR1159G027 Amborella trichopoda HOM05D004433 ORTHO05D005251 2.8e-15 85.9 76 61.8
Os02g0227000 Oryza sativa ssp. japonica HOM05D004433 ORTHO05D005251 3.7e-15 85.5 95 47.4
Zm00001eb239610 Zea mays HOM05D004433 ORTHO05D005251 2.4e-14 82.8 95 42.1
Ciclev10010169m.g Citrus clementina HOM05D004433 ORTHO05D005251 8.0e-10 67.8 52 61.5
PRCOL_00001006 Prasinoderma coloniale HOM05D004433 ORTHO05D005251 8.8e-09 64.3 105 35.2
Cre06.g252150 Chlamydomonas reinhardtii HOM05D004433 ORTHO05D005251 4.8e-07 58.5 91 38.5
Sabra18G0052000 Salix brachista HOM05D004433 ORTHO05D005251 6.3e-07 58.2 90 41.1


User provided reference genes

Program Settings