Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g55376 Chara braunii HOM05D004558 ORTHO05D005647 4.0e-141 505.0 300 100.0
CBR_g50688 Chara braunii HOM05D004558 ORTHO05D005647 5.0e-67 258.8 169 79.3
CDE04G3757 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 2.5e-58 229.9 354 40.4
Mapoly0124s0017 Marchantia polymorpha HOM05D004558 ORTHO05D005647 4.3e-58 229.2 366 40.4
BcaC07g40007 Brassica carinata HOM05D004558 ORTHO05D005647 5.6e-58 228.8 383 37.9
A09p49810 Brassica napus HOM05D004558 ORTHO05D005647 5.6e-58 228.8 359 39.0
BraA09t40434Z Brassica rapa HOM05D004558 ORTHO05D005647 5.6e-58 228.8 359 39.0
Thhalv10006009m.g Eutrema salsugineum HOM05D004558 ORTHO05D005647 5.6e-58 228.8 395 37.0
SEGI_29193 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 9.5e-58 228.0 394 37.8
BraA07t29976Z Brassica rapa HOM05D004558 ORTHO05D005647 2.8e-57 226.5 359 39.0
CSS0026074 Camellia sinensis var. sinensis HOM05D004558 ORTHO05D005647 2.8e-57 226.5 354 39.3
CSS0045826 Camellia sinensis var. sinensis HOM05D004558 ORTHO05D005647 2.8e-57 226.5 354 39.3
BcaC08g44811 Brassica carinata HOM05D004558 ORTHO05D005647 3.6e-57 226.1 359 38.7
BolC6t37555H Brassica oleracea HOM05D004558 ORTHO05D005647 3.6e-57 226.1 359 38.7
ATR1096G103 Amborella trichopoda HOM05D004558 ORTHO05D005647 4.7e-57 225.7 398 37.9
BcaC07g40105 Brassica carinata HOM05D004558 ORTHO05D005647 4.7e-57 225.7 359 39.0
Hma1.2p1_0251F.1_g102500 Hydrangea macrophylla HOM05D004558 ORTHO05D005647 4.7e-57 225.7 361 38.5
BcaB02g07634 Brassica carinata HOM05D004558 ORTHO05D005647 8.0e-57 224.9 357 38.7
A07p23140 Brassica napus HOM05D004558 ORTHO05D005647 8.0e-57 224.9 359 38.7
CARHR167090 Cardamine hirsuta HOM05D004558 ORTHO05D005647 8.0e-57 224.9 359 39.6
Aa31LG10G11840 Aethionema arabicum HOM05D004558 ORTHO05D005647 1.0e-56 224.6 394 37.6
EL10Ac3g07349 Beta vulgaris HOM05D004558 ORTHO05D005647 1.0e-56 224.6 328 39.9
C06p23840 Brassica napus HOM05D004558 ORTHO05D005647 1.0e-56 224.6 363 38.3
Migut.K00174 Erythranthe guttata HOM05D004558 ORTHO05D005647 1.4e-56 224.2 396 37.1
Sed0025713 Sechium edule HOM05D004558 ORTHO05D005647 1.4e-56 224.2 354 38.7
Nitab4.5_0000123g0170 Nicotiana tabacum HOM05D004558 ORTHO05D005647 1.8e-56 223.8 380 38.2
Rhsim04G0119100 Rhododendron simsii HOM05D004558 ORTHO05D005647 1.8e-56 223.8 349 39.3
vmacro08967 Vaccinium macrocarpon HOM05D004558 ORTHO05D005647 2.3e-56 223.4 349 39.0
GSVIVG01025841001 Vitis vinifera HOM05D004558 ORTHO05D005647 2.3e-56 223.4 357 39.5
Duzib093G1273 Durio zibethinus HOM05D004558 ORTHO05D005647 3.0e-56 223.0 357 39.2
Nitab4.5_0001270g0120 Nicotiana tabacum HOM05D004558 ORTHO05D005647 3.0e-56 223.0 380 37.9
PGR042G2423 Punica granatum HOM05D004558 ORTHO05D005647 4.0e-56 222.6 380 37.4
Carub.0005s2368 Capsella rubella HOM05D004558 ORTHO05D005647 6.8e-56 221.9 395 36.7
Cc06_g22740 Coffea canephora HOM05D004558 ORTHO05D005647 6.8e-56 221.9 378 37.0
Glyma.03G119500 Glycine max HOM05D004558 ORTHO05D005647 6.8e-56 221.9 395 36.5
VMungo1383G3341 Vigna mungo HOM05D004558 ORTHO05D005647 6.8e-56 221.9 370 38.4
AL5G38370 Arabidopsis lyrata HOM05D004558 ORTHO05D005647 8.9e-56 221.5 357 38.9
MBI13_g30268_MAGBIO Magnolia biondii HOM05D004558 ORTHO05D005647 8.9e-56 221.5 378 37.8
Medtr7g088340 Medicago truncatula HOM05D004558 ORTHO05D005647 8.9e-56 221.5 349 39.3
FAN19G1019 Fragaria x ananassa HOM05D004558 ORTHO05D005647 1.2e-55 221.1 395 36.7
Duzib128G1152 Durio zibethinus HOM05D004558 ORTHO05D005647 1.5e-55 220.7 354 38.7
FvH4_1g28960 Fragaria vesca HOM05D004558 ORTHO05D005647 1.5e-55 220.7 395 36.7
Solyc10g077040.2 Solanum lycopersicum HOM05D004558 ORTHO05D005647 1.5e-55 220.7 349 39.3
Sopen10g028720 Solanum pennellii HOM05D004558 ORTHO05D005647 1.5e-55 220.7 349 39.3
PGSC0003DMG400007188 Solanum tuberosum HOM05D004558 ORTHO05D005647 1.5e-55 220.7 349 39.3
Aqoxy2G00035_Aqoxy2G00036 Aquilegia oxysepala HOM05D004558 ORTHO05D005647 2.0e-55 220.3 361 38.8
CsaV3_4G031720 Cucumis sativus L. HOM05D004558 ORTHO05D005647 2.0e-55 220.3 353 38.5
DCAR_016944 Daucus carota HOM05D004558 ORTHO05D005647 2.6e-55 219.9 355 39.2
FAN26G0634 Fragaria x ananassa HOM05D004558 ORTHO05D005647 2.6e-55 219.9 360 38.3
Gohir.A01G192400 Gossypium hirsutum HOM05D004558 ORTHO05D005647 2.6e-55 219.9 371 38.0
Potri.006G027300 Populus trichocarpa HOM05D004558 ORTHO05D005647 2.6e-55 219.9 370 37.0
Sp5g05650 Schrenkiella parvula HOM05D004558 ORTHO05D005647 2.6e-55 219.9 399 36.6
FAN23G1063 Fragaria x ananassa HOM05D004558 ORTHO05D005647 3.4e-55 219.5 360 38.3
arahy.Tifrunner.gnm1.ann1.VDKY5W Arachis hypogaea HOM05D004558 ORTHO05D005647 4.4e-55 219.2 353 38.5
arahy.Tifrunner.gnm1.ann1.XE2WF0 Arachis hypogaea HOM05D004558 ORTHO05D005647 4.4e-55 219.2 353 38.5
AagrBONN_evm.TU.Sc2ySwM_228.50 Anthoceros agrestis HOM05D004558 ORTHO05D005647 5.7e-55 218.8 360 38.1
ClCG04G004930 Citrullus lanatus HOM05D004558 ORTHO05D005647 5.7e-55 218.8 353 38.2
Ciclev10011842m.g Citrus clementina HOM05D004558 ORTHO05D005647 5.7e-55 218.8 353 39.1
QL07p015188 Quercus lobata HOM05D004558 ORTHO05D005647 5.7e-55 218.8 356 38.2
TPR.G23197 Trifolium pratense HOM05D004558 ORTHO05D005647 5.7e-55 218.8 349 38.7
Phvul.001G108700 Phaseolus vulgaris HOM05D004558 ORTHO05D005647 7.5e-55 218.4 395 37.0
Thecc.05G130200 Theobroma cacao HOM05D004558 ORTHO05D005647 7.5e-55 218.4 357 38.7
Cpa.g.sc92.57 Carica papaya HOM05D004558 ORTHO05D005647 9.8e-55 218.0 376 37.5
Pp3c11_7910 Physcomitrium patens HOM05D004558 ORTHO05D005647 9.8e-55 218.0 386 38.1
TWI53G2040 Tripterygium wilfordii HOM05D004558 ORTHO05D005647 9.8e-55 218.0 357 37.0
TAR369G0680 Trochodendron aralioides HOM05D004558 ORTHO05D005647 9.8e-55 218.0 359 38.2
FAN28G2842 Fragaria x ananassa HOM05D004558 ORTHO05D005647 1.3e-54 217.6 360 38.1
Lj1A1078T64 Lonicera japonica HOM05D004558 ORTHO05D005647 1.3e-54 217.6 348 39.4
CAN.G959.37 Capsicum annuum HOM05D004558 ORTHO05D005647 1.7e-54 217.2 349 38.7
DCAR_013513 Daucus carota HOM05D004558 ORTHO05D005647 2.2e-54 216.9 375 37.6
Gohir.D01G177500 Gossypium hirsutum HOM05D004558 ORTHO05D005647 2.2e-54 216.9 349 38.7
Sabra06G0020200 Salix brachista HOM05D004558 ORTHO05D005647 2.2e-54 216.9 370 36.8
TAR546G0001 Trochodendron aralioides HOM05D004558 ORTHO05D005647 2.2e-54 216.9 386 36.5
HPP92_000696 Vanilla planifolia HOM05D004558 ORTHO05D005647 2.2e-54 216.9 357 38.4
Actinidia38207 Actinidia chinensis HOM05D004558 ORTHO05D005647 2.9e-54 216.5 349 38.1
AUR62018443 Chenopodium quinoa HOM05D004558 ORTHO05D005647 2.9e-54 216.5 357 37.5
Lj1g0019045 Lotus japonicus HOM05D004558 ORTHO05D005647 2.9e-54 216.5 370 37.3
RcHm_v2.0_Chr3g0494361 Rosa chinensis HOM05D004558 ORTHO05D005647 2.9e-54 216.5 373 37.3
Hund24509 Selenicereus undatus HOM05D004558 ORTHO05D005647 2.9e-54 216.5 361 38.2
Actinidia00883 Actinidia chinensis HOM05D004558 ORTHO05D005647 4.9e-54 215.7 349 37.8
Potri.016G025000 Populus trichocarpa HOM05D004558 ORTHO05D005647 4.9e-54 215.7 370 37.0
CiPaw.09G162600 Carya illinoinensis HOM05D004558 ORTHO05D005647 6.4e-54 215.3 357 37.8
Eucgr.A02177 Eucalyptus grandis HOM05D004558 ORTHO05D005647 6.4e-54 215.3 395 36.2
PSO339G0825 Papaver somniferum HOM05D004558 ORTHO05D005647 6.4e-54 215.3 353 38.5
PSO384G3158 Papaver somniferum HOM05D004558 ORTHO05D005647 6.4e-54 215.3 353 38.5
Sabra16G0030900 Salix brachista HOM05D004558 ORTHO05D005647 6.4e-54 215.3 370 36.8
TWI77G0093 Tripterygium wilfordii HOM05D004558 ORTHO05D005647 6.4e-54 215.3 357 37.0
CDE02G2354 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 8.3e-54 214.9 358 37.4
THA.LOC104803235 Tarenaya hassleriana HOM05D004558 ORTHO05D005647 1.1e-53 214.5 379 36.9
MSTRG.6287 Avicennia marina HOM05D004558 ORTHO05D005647 1.4e-53 214.2 353 38.5
AUR62020990 Chenopodium quinoa HOM05D004558 ORTHO05D005647 1.4e-53 214.2 357 37.3
Rhsim04G0119000 Rhododendron simsii HOM05D004558 ORTHO05D005647 1.4e-53 214.2 363 37.7
Lalb_Chr14g0365301 Lupinus albus HOM05D004558 ORTHO05D005647 1.8e-53 213.8 353 38.2
Prupe.7G022500 Prunus persica HOM05D004558 ORTHO05D005647 1.8e-53 213.8 381 36.7
Gorai.002G225700 Gossypium raimondii HOM05D004558 ORTHO05D005647 2.4e-53 213.4 358 37.7
Manes.09G073800 Manihot esculenta HOM05D004558 ORTHO05D005647 3.2e-53 213.0 370 35.9
Os01g0279100 Oryza sativa ssp. japonica HOM05D004558 ORTHO05D005647 3.2e-53 213.0 384 36.7
Sc19g0007850 Simmondsia chinensis HOM05D004558 ORTHO05D005647 3.2e-53 213.0 363 36.9
SGA_v2.0_scaffold69G23196 Striga asiatica HOM05D004558 ORTHO05D005647 3.2e-53 213.0 353 38.5
Lsat_1_v5_gn_9_30221 Lactuca sativa HOM05D004558 ORTHO05D005647 4.1e-53 212.6 349 37.8
CANSAT78G1575 Cannabis sativa HOM05D004558 ORTHO05D005647 7.0e-53 211.8 354 37.3
ECA247G1747 Erigeron canadensis HOM05D004558 ORTHO05D005647 7.0e-53 211.8 378 36.2
HanXRQChr10g0291961 Helianthus annuus HOM05D004558 ORTHO05D005647 7.0e-53 211.8 353 38.0
SMO119G0375 Selaginella moellendorffii HOM05D004558 ORTHO05D005647 7.0e-53 211.8 363 38.6
THA.LOC104824384 Tarenaya hassleriana HOM05D004558 ORTHO05D005647 9.2e-53 211.5 353 38.0
SGA_v2.0_scaffold66G22316 Striga asiatica HOM05D004558 ORTHO05D005647 1.2e-52 211.1 353 38.5
unitig_46.g18485 Utricularia gibba HOM05D004558 ORTHO05D005647 1.2e-52 211.1 353 38.8
Cfa019915 Carpinus fangiana HOM05D004558 ORTHO05D005647 4.6e-52 209.1 372 36.3
Zm00001eb332650 Zea mays HOM05D004558 ORTHO05D005647 4.6e-52 209.1 378 35.7
Zm00001eb129000 Zea mays HOM05D004558 ORTHO05D005647 5.9e-52 208.8 353 36.8
Oeu023011.1 Olea europaea HOM05D004558 ORTHO05D005647 7.8e-52 208.4 383 37.1
Oeu060750.2 Olea europaea HOM05D004558 ORTHO05D005647 3.0e-51 206.5 390 34.9
Haze_20335 Corylus avellana HOM05D004558 ORTHO05D005647 3.9e-51 206.1 370 35.9
Peaxi162Scf00003g05355 Petunia axillaris HOM05D004558 ORTHO05D005647 6.6e-51 205.3 370 36.5
Cre12.g510050 Chlamydomonas reinhardtii HOM05D004558 ORTHO05D005647 1.0e-48 198.0 382 37.2
Lalb_Chr24g0400681 Lupinus albus HOM05D004558 ORTHO05D005647 1.0e-48 198.0 371 33.7
Ah.04g150190 Amaranthus hybridus HOM05D004558 ORTHO05D005647 6.8e-48 195.3 343 37.0
HPP92_000650 Vanilla planifolia HOM05D004558 ORTHO05D005647 8.9e-48 194.9 127 77.2
MELO3C026802.2 Cucumis melo HOM05D004558 ORTHO05D005647 1.2e-47 194.5 123 78.9
Psat3g082520 Pisum sativum HOM05D004558 ORTHO05D005647 1.2e-47 194.5 119 80.7
Glyma.19G123800 Glycine max HOM05D004558 ORTHO05D005647 2.6e-47 193.4 119 79.8
Atru.chr1.1539 Acer truncatum HOM05D004558 ORTHO05D005647 3.4e-47 193.0 123 78.0
Ca_08344_v3 Cicer arietinum L. HOM05D004558 ORTHO05D005647 5.8e-47 192.2 119 79.8
CDE02G0342 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 2.2e-46 190.3 129 75.2
Dinv11638 Davidia involucrata HOM05D004558 ORTHO05D005647 3.7e-46 189.5 119 78.2
PRCOL_00006479 Prasinoderma coloniale HOM05D004558 ORTHO05D005647 1.9e-45 187.2 128 72.7
unitig_37.g12773 Utricularia gibba HOM05D004558 ORTHO05D005647 7.0e-45 185.3 123 75.6
Pp3c7_26570 Physcomitrium patens HOM05D004558 ORTHO05D005647 2.0e-44 183.7 167 61.1
AT3G56940 Arabidopsis thaliana HOM05D004558 ORTHO05D005647 7.8e-44 181.8 333 36.0
MCO13G411 Micromonas commoda HOM05D004558 ORTHO05D005647 6.6e-43 178.7 128 68.8
Cre07.g346050 Chlamydomonas reinhardtii HOM05D004558 ORTHO05D005647 4.3e-42 176.0 154 61.0
SMO115G0161 Selaginella moellendorffii HOM05D004558 ORTHO05D005647 8.1e-41 171.8 322 37.3
Pp3c2_30650 Physcomitrium patens HOM05D004558 ORTHO05D005647 1.9e-29 134.0 101 67.3
AagrBONN_evm.TU.Sc2ySwM_368.2127 Anthoceros agrestis HOM05D004558 ORTHO05D005647 7.1e-21 105.5 70 74.3
BcaC02g09879 Brassica carinata HOM05D004558 ORTHO05D005647 3.3e-18 96.7 83 50.6
A04p03620 Brassica napus HOM05D004558 ORTHO05D005647 3.3e-18 96.7 83 50.6
C04p35620 Brassica napus HOM05D004558 ORTHO05D005647 3.3e-18 96.7 83 50.6
C08p32210 Brassica napus HOM05D004558 ORTHO05D005647 3.3e-18 96.7 83 50.6
BolC4t25242H Brassica oleracea HOM05D004558 ORTHO05D005647 3.3e-18 96.7 83 50.6
BraA04t16073Z Brassica rapa HOM05D004558 ORTHO05D005647 3.3e-18 96.7 83 50.6
Oeu021019.1 Olea europaea HOM05D004558 ORTHO05D005647 7.3e-18 95.5 109 53.2
AagrBONN_evm.TU.Sc2ySwM_344.4282 Anthoceros agrestis HOM05D004558 ORTHO05D000003 2.8e-17 93.6 70 70.0
SalBow6G0122 Salvia bowleyana HOM05D004558 ORTHO05D005647 8.1e-17 92.0 83 49.4
Lalb_Chr22g0357681 Lupinus albus HOM05D004558 ORTHO05D005647 3.1e-16 90.1 72 63.9
SEGI_05566 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 4.0e-16 89.7 84 45.2
SEGI_20922 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 1.2e-15 88.2 84 44.0
CDE02G4696 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 4.9e-14 82.8 83 42.2
Ah.13g077400 Amaranthus hybridus HOM05D004558 ORTHO05D000435 5.4e-13 79.3 169 36.1
SalBow1G4785 Salvia bowleyana HOM05D004558 ORTHO05D005647 7.1e-13 79.0 71 46.5
BcaB02g08342 Brassica carinata HOM05D004558 ORTHO05D005647 6.0e-12 75.9 75 44.0
ClCG10G010320 Citrullus lanatus HOM05D004558 ORTHO05D005647 1.9e-10 70.9 80 41.2
MD00G1107700 Malus domestica HOM05D004558 ORTHO05D005647 2.9e-06 57.0 62 35.5


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