Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g50203 Chara braunii HOM05D004601 ORTHO05D005806 5.7e-155 550.8 268 100.0
CBR_g37694 Chara braunii HOM05D004985 ORTHO05D005912 1.1e-76 290.8 155 92.3
CBR_g28495 Chara braunii HOM05D000019 ORTHO05D000002 9.0e-68 261.2 142 88.7
CBR_g29307 Chara braunii HOM05D002999 ORTHO05D003137 1.3e-53 214.2 136 77.2
CBR_g45243 Chara braunii HOM05D002999 ORTHO05D005806 1.8e-36 157.1 90 83.3
Cfa013456 Carpinus fangiana HOM05D004601 ORTHO05D005806 3.8e-26 122.9 99 54.5
Hma1.2p1_0235F.1_g098680 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 5.0e-26 122.5 99 53.5
Oeu019558.1 Olea europaea HOM05D004601 ORTHO05D005806 5.0e-26 122.5 99 55.6
Potri.018G141900 Populus trichocarpa HOM05D004601 ORTHO05D005806 5.0e-26 122.5 99 54.5
CANSAT11G0507 Cannabis sativa HOM05D004601 ORTHO05D005806 6.5e-26 122.1 99 55.6
Prupe.1G074600 Prunus persica HOM05D004601 ORTHO05D005806 6.5e-26 122.1 99 54.5
TAR383G0412 Trochodendron aralioides HOM05D004601 ORTHO05D005806 2.5e-25 120.2 99 54.5
Solyc07g017990.3 Solanum lycopersicum HOM05D004601 ORTHO05D005806 3.2e-25 119.8 97 57.7
Sopen00g010200 Solanum pennellii HOM05D004601 ORTHO05D005806 3.2e-25 119.8 97 57.7
Sopen07g006920 Solanum pennellii HOM05D004601 ORTHO05D005806 3.2e-25 119.8 97 57.7
CARHR270950 Cardamine hirsuta HOM05D004601 ORTHO05D005806 4.2e-25 119.4 99 55.6
PGR142G2375 Punica granatum HOM05D004601 ORTHO05D005806 4.2e-25 119.4 99 54.5
PGR142G4125 Punica granatum HOM05D004601 ORTHO05D005806 4.2e-25 119.4 99 54.5
RcHm_v2.0_Chr4g0399311 Rosa chinensis HOM05D004601 ORTHO05D005806 4.2e-25 119.4 97 56.7
Sabra18G0116000 Salix brachista HOM05D004601 ORTHO05D005806 4.2e-25 119.4 110 48.2
Sc16g0011160 Simmondsia chinensis HOM05D004601 ORTHO05D005806 4.2e-25 119.4 92 53.3
Aa31LG3G13060 Aethionema arabicum HOM05D004601 ORTHO05D005806 5.5e-25 119.0 99 55.6
AL8G33090 Arabidopsis lyrata HOM05D004601 ORTHO05D005806 5.5e-25 119.0 99 56.6
AT5G57160 Arabidopsis thaliana HOM05D004601 ORTHO05D005806 5.5e-25 119.0 99 56.6
Thhalv10012474m.g Eutrema salsugineum HOM05D004601 ORTHO05D005806 5.5e-25 119.0 99 55.6
Sed0026596 Sechium edule HOM05D004601 ORTHO05D005806 5.5e-25 119.0 99 53.5
Actinidia02499 Actinidia chinensis HOM05D004601 ORTHO05D005806 9.4e-25 118.2 99 54.5
MSTRG.5939 Avicennia marina HOM05D004601 ORTHO05D005806 9.4e-25 118.2 99 53.5
BcaB08g35989 Brassica carinata HOM05D004601 ORTHO05D005806 9.4e-25 118.2 90 56.7
Nitab4.5_0006199g0030 Nicotiana tabacum HOM05D004601 ORTHO05D005806 9.4e-25 118.2 95 56.8
BolC9t57749H Brassica oleracea HOM05D004601 ORTHO05D005806 1.2e-24 117.9 90 56.7
CiPaw.08G032200 Carya illinoinensis HOM05D004601 ORTHO05D005806 1.2e-24 117.9 95 54.7
FAN17G2239 Fragaria x ananassa HOM05D004601 ORTHO05D005806 1.2e-24 117.9 105 52.4
Nn8g40736 Nelumbo nucifera HOM05D004601 ORTHO05D005806 1.2e-24 117.9 99 52.5
Medtr2g038030 Medicago truncatula HOM05D004601 ORTHO05D005806 1.6e-24 117.5 83 57.8
TPR.G7576 Trifolium pratense HOM05D004601 ORTHO05D000001 1.6e-24 117.5 83 57.8
Lsat_1_v5_gn_8_69120 Lactuca sativa HOM05D004601 ORTHO05D005806 2.1e-24 117.1 83 57.8
Lj7A622G14 Lonicera japonica HOM05D004601 ORTHO05D005806 2.1e-24 117.1 99 52.5
HPP92_021964 Vanilla planifolia HOM05D004601 ORTHO05D005806 2.1e-24 117.1 99 51.5
CSS0021444 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 2.7e-24 116.7 99 54.5
Phvul.009G235800 Phaseolus vulgaris HOM05D004601 ORTHO05D005806 2.7e-24 116.7 99 51.5
A10p14520 Brassica napus HOM05D004601 ORTHO05D005806 3.6e-24 116.3 90 55.6
BraA10t43541Z Brassica rapa HOM05D004601 ORTHO05D005806 3.6e-24 116.3 90 55.6
Lalb_Chr08g0231931 Lupinus albus HOM05D004601 ORTHO05D005806 3.6e-24 116.3 99 53.5
BcaC04g19995 Brassica carinata HOM05D004601 ORTHO05D005806 4.7e-24 115.9 99 53.5
Cc06_g20790 Coffea canephora HOM05D004601 ORTHO05D005806 4.7e-24 115.9 99 51.5
Thecc.09G186600 Theobroma cacao HOM05D004601 ORTHO05D005806 4.7e-24 115.9 99 51.5
Dinv25455 Davidia involucrata HOM05D004601 ORTHO05D005806 6.1e-24 115.5 95 53.7
MD16G1247900 Malus domestica HOM05D004601 ORTHO05D005806 6.1e-24 115.5 79 57.0
Sp6g18890 Schrenkiella parvula HOM05D004601 ORTHO05D005806 6.1e-24 115.5 99 54.5
THA.LOC104817773 Tarenaya hassleriana HOM05D004601 ORTHO05D005806 6.1e-24 115.5 99 54.5
ATR0626G236 Amborella trichopoda HOM05D004601 ORTHO05D005806 8.0e-24 115.2 95 52.6
C09p48970 Brassica napus HOM05D004601 ORTHO05D005806 8.0e-24 115.2 90 54.4
Cpa.g.sc95.10 Carica papaya HOM05D004601 ORTHO05D005806 8.0e-24 115.2 90 52.2
FAN12G1367 Fragaria x ananassa HOM05D004601 ORTHO05D005806 8.0e-24 115.2 93 54.8
Gohir.D13G212700 Gossypium hirsutum HOM05D004601 ORTHO05D005806 8.0e-24 115.2 99 50.5
Lj6g0004756 Lotus japonicus HOM05D004601 ORTHO05D005806 8.0e-24 115.2 83 56.6
MBI16_g10345_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 8.0e-24 115.2 83 56.6
PSO170G3696 Papaver somniferum HOM05D004601 ORTHO05D005806 8.0e-24 115.2 99 53.5
Psat1g144440 Pisum sativum HOM05D004601 ORTHO05D005806 8.0e-24 115.2 83 56.6
Ca_02111_v3 Cicer arietinum L. HOM05D004601 ORTHO05D005806 1.0e-23 114.8 99 51.5
HanXRQChr05g0141031 Helianthus annuus HOM05D004601 ORTHO05D005806 1.0e-23 114.8 83 55.4
PSO063G2966 Papaver somniferum HOM05D004601 ORTHO05D005806 1.0e-23 114.8 99 52.5
Gorai.013G243100 Gossypium raimondii HOM05D004601 ORTHO05D005806 1.4e-23 114.4 95 50.5
CsaV3_2G008760 Cucumis sativus L. HOM05D004601 ORTHO05D005806 1.8e-23 114.0 99 52.5
Glyma.15G166700 Glycine max HOM05D004601 ORTHO05D005806 4.0e-23 112.8 83 53.0
Nitab4.5_0000056g0070 Nicotiana tabacum HOM05D004601 ORTHO05D005806 5.2e-23 112.5 81 58.0
MBI16_g47869_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 6.8e-23 112.1 86 53.5
Mapoly0001s0137 Marchantia polymorpha HOM05D004601 ORTHO05D005806 6.8e-23 112.1 79 57.0
Pp3c14_5920 Physcomitrium patens HOM05D004601 ORTHO05D005806 6.8e-23 112.1 93 55.9
Atru.chr7.956 Acer truncatum HOM05D004601 ORTHO05D005806 1.2e-22 111.3 83 55.4
Migut.J00793 Erythranthe guttata HOM05D004601 ORTHO05D005806 1.2e-22 111.3 99 49.5
Ah.06g194430 Amaranthus hybridus HOM05D004601 ORTHO05D005806 1.5e-22 110.9 99 50.5
Ciclev10007283m.g Citrus clementina HOM05D004601 ORTHO05D005806 1.5e-22 110.9 83 54.2
ECA236G0938 Erigeron canadensis HOM05D004601 ORTHO05D005806 1.5e-22 110.9 99 51.5
TWI63G1718 Tripterygium wilfordii HOM05D004601 ORTHO05D005806 1.5e-22 110.9 99 49.5
Aqoxy7G02847 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 2.6e-22 110.2 95 50.5
Duzib150G1331 Durio zibethinus HOM05D004601 ORTHO05D005806 2.6e-22 110.2 99 48.5
SGA_v2.0_scaffold112G31593 Striga asiatica HOM05D004601 ORTHO05D005806 4.4e-22 109.4 81 54.3
arahy.Tifrunner.gnm1.ann1.BQ8TF8 Arachis hypogaea HOM05D004601 ORTHO05D005806 5.7e-22 109.0 81 53.1
GSVIVG01029314001 Vitis vinifera HOM05D004601 ORTHO05D005806 1.3e-21 107.8 95 48.4
vmacro05994 Vaccinium macrocarpon HOM05D004601 ORTHO05D005806 2.2e-21 107.1 81 53.1
SEGI_14441 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 2.8e-21 106.7 83 53.0
Glyma.09G060066 Glycine max HOM05D004601 ORTHO05D005806 8.3e-21 105.1 90 48.9
SHI03064 Sapria himalayana HOM05D004601 ORTHO05D005806 8.3e-21 105.1 79 53.2
Rhsim03G0267200 Rhododendron simsii HOM05D004601 ORTHO05D005806 1.1e-20 104.8 81 53.1
CBR_g8429 Chara braunii HOM05D000019 ORTHO05D000353 1.4e-20 104.4 128 52.3
Zm00001eb071490 Zea mays HOM05D004601 ORTHO05D005806 2.4e-20 103.6 95 49.5
COL.COLO4_06398 Corchorus olitorius HOM05D004601 ORTHO05D005806 4.1e-20 102.8 83 49.4
EL10Ac4g10170 Beta vulgaris HOM05D004601 ORTHO05D005806 5.9e-19 99.0 99 46.5
SMO144G0133 Selaginella moellendorffii HOM05D004601 ORTHO05D005806 1.7e-18 97.4 118 43.2
AUR62000175 Chenopodium quinoa HOM05D004601 ORTHO05D005806 3.8e-18 96.3 96 46.9
AagrBONN_evm.TU.Sc2ySwM_228.1820 Anthoceros agrestis HOM05D004601 ORTHO05D005806 5.0e-18 95.9 99 46.5
AUR62039835 Chenopodium quinoa HOM05D004601 ORTHO05D005806 2.1e-16 90.5 99 42.4
arahy.Tifrunner.gnm1.ann1.8TE3EA Arachis hypogaea HOM05D004601 ORTHO05D005806 3.0e-15 86.7 62 54.8
AagrBONN_evm.TU.Sc2ySwM_228.3225 Anthoceros agrestis HOM05D004601 ORTHO05D005806 6.8e-15 85.5 74 50.0
SEGI_06603 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 1.2e-14 84.7 72 48.6
CDE07G0894 Ceratophyllum demersum HOM05D004601 ORTHO05D005806 2.6e-14 83.6 99 44.4
Gohir.A13G208300 Gossypium hirsutum HOM05D004601 ORTHO05D005806 1.3e-13 81.3 99 43.4
ClCG11G011730 Citrullus lanatus HOM05D004601 ORTHO05D005806 6.3e-13 79.0 58 55.2
Haze_22027 Corylus avellana HOM05D004601 ORTHO05D005806 2.4e-12 77.0 54 53.7
DCAR_020147 Daucus carota HOM05D004601 ORTHO05D005806 3.2e-12 76.6 81 44.4
Manes.14G159112 Manihot esculenta HOM05D004601 ORTHO05D005806 4.1e-12 76.3 96 43.8
Peaxi162Scf00231g01116 Petunia axillaris HOM05D004601 ORTHO05D005806 1.6e-11 74.3 81 43.2
CSS0044178 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 1.5e-09 67.8 55 49.1
PRCOL_00001076 Prasinoderma coloniale HOM05D004601 ORTHO05D005806 1.8e-07 60.8 95 37.9
MCO08G104 Micromonas commoda HOM05D004601 ORTHO05D005806 2.6e-06 57.0 72 36.1


User provided reference genes

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