Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 0.0e+00 1823.5 1059 100.0
CBR_g19531 Chara braunii HOM05D005942 ORTHO05D007209 2.7e-163 580.5 939 43.7
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 1.5e-65 255.8 807 28.7
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 3.2e-60 238.0 920 26.3
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 7.7e-54 216.9 685 28.9
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 1.4e-47 196.1 745 25.0
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 1.2e-43 183.0 667 24.3
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 2.7e-43 181.8 678 25.7
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 1.4e-42 179.5 788 24.2
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 1.8e-42 179.1 673 24.2
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 2.3e-42 178.7 667 24.0
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 3.0e-42 178.3 691 24.3
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 6.8e-42 177.2 670 25.2
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 8.8e-42 176.8 665 25.6
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 8.8e-42 176.8 677 25.1
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 1.5e-41 176.0 838 25.8
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 3.4e-41 174.9 685 24.2
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 4.4e-41 174.5 685 24.4
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 7.5e-41 173.7 733 25.0
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 1.3e-40 172.9 671 25.0
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 2.2e-40 172.2 677 25.4
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 2.8e-40 171.8 697 25.1
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 2.8e-40 171.8 783 23.9
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 3.7e-40 171.4 680 24.9
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 6.3e-40 170.6 674 24.5
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 8.3e-40 170.2 729 24.4
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 8.3e-40 170.2 675 25.6
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 8.3e-40 170.2 697 25.4
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 8.3e-40 170.2 699 25.8
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 1.1e-39 169.9 680 25.3
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 1.8e-39 169.1 732 24.6
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 1.8e-39 169.1 729 24.3
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 2.4e-39 168.7 729 24.3
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 2.4e-39 168.7 772 24.9
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 3.1e-39 168.3 708 24.0
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 5.4e-39 167.5 706 23.4
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 9.1e-39 166.8 773 24.7
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.2e-38 166.4 773 25.0
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 1.2e-38 166.4 710 24.5
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 1.2e-38 166.4 715 24.2
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 1.6e-38 166.0 669 24.1
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 1.6e-38 166.0 673 23.9
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 3.5e-38 164.9 708 23.3
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 4.5e-38 164.5 683 23.6
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 1.3e-37 162.9 672 24.7
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 1.7e-37 162.5 792 23.7
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 1.7e-37 162.5 678 24.6
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 2.3e-37 162.2 794 24.3
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 2.3e-37 162.2 733 24.0
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 2.9e-37 161.8 736 24.2
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 2.9e-37 161.8 670 24.6
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 3.8e-37 161.4 694 23.9
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 5.0e-37 161.0 757 25.4
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 6.6e-37 160.6 730 24.2
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 6.6e-37 160.6 795 24.3
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 6.6e-37 160.6 757 25.4
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 6.6e-37 160.6 681 23.8
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 1.1e-36 159.8 696 24.4
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 1.1e-36 159.8 815 23.2
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 2.5e-36 158.7 755 24.0
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 2.5e-36 158.7 729 24.4
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 3.3e-36 158.3 673 25.0
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 3.3e-36 158.3 676 24.7
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 4.2e-36 157.9 733 24.1
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 4.2e-36 157.9 715 23.5
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 7.2e-36 157.1 806 24.3
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 7.2e-36 157.1 721 23.4
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 1.6e-35 156.0 797 24.0
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 2.1e-35 155.6 690 23.6
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 3.6e-35 154.8 742 25.5
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 3.6e-35 154.8 729 23.6
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 4.7e-35 154.5 795 23.8
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 4.7e-35 154.5 749 23.8
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 4.7e-35 154.5 671 25.2
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 6.1e-35 154.1 672 22.9
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 6.1e-35 154.1 811 23.8
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 1.0e-34 153.3 745 23.4
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 2.3e-34 152.1 763 23.9
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 3.0e-34 151.8 833 24.1
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 4.0e-34 151.4 713 23.4
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 5.2e-34 151.0 638 23.2
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 5.2e-34 151.0 783 23.0
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.2e-33 149.8 569 26.2
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 2.0e-33 149.1 922 23.6
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 2.6e-33 148.7 696 24.6
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 3.4e-33 148.3 792 24.1
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 1.3e-32 146.4 670 23.7
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 3.7e-32 144.8 675 23.4
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 6.3e-32 144.1 792 23.5
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 1.4e-31 142.9 576 24.3
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 2.4e-31 142.1 493 24.9
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 5.4e-31 141.0 810 23.2
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 2.9e-29 135.2 834 24.2
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 6.6e-29 134.0 710 23.2
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 8.6e-29 133.7 699 23.5
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 1.2e-27 129.8 665 24.2
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 1.2e-27 129.8 508 25.6
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 1.2e-27 129.8 671 23.1
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 8.0e-27 127.1 660 22.4
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 1.4e-26 126.3 766 22.6
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 1.8e-26 125.9 747 22.4
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 2.3e-26 125.6 681 22.8
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 2.3e-26 125.6 403 26.3
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 6.8e-26 124.0 400 26.8
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 2.2e-24 119.0 162 38.9
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 1.4e-23 116.3 162 38.3
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 2.4e-23 115.5 535 22.8
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 7.0e-23 114.0 668 23.4
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 6.0e-22 110.9 333 25.8
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 2.5e-20 105.5 280 32.5
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 6.2e-19 100.9 119 42.9
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 6.8e-18 97.4 276 27.5
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.5e-17 96.3 166 33.7
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 6.6e-13 80.9 411 24.3
PRCOL_00005763 Prasinoderma coloniale HOM05D005942 ORTHO05D007209 1.8e-10 72.8 384 23.2
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 4.4e-09 68.2 107 33.6
CAN.G635.26 Capsicum annuum HOM05D005942 ORTHO05D007209 4.4e-09 68.2 88 37.5
HPP92_016646 Vanilla planifolia HOM05D005942 ORTHO05D007209 3.2e-07 62.0 374 22.7


User provided reference genes

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