Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g48425 Chara braunii HOM05D004008 ORTHO05D005383 6.7e-235 817.0 423 100.0
Mapoly0015s0060 Marchantia polymorpha HOM05D004008 ORTHO05D005383 4.3e-141 505.4 417 65.0
Pp3c6_15990 Physcomitrium patens HOM05D004008 ORTHO05D005383 2.8e-140 502.7 317 79.5
Pp3c15_6300 Physcomitrium patens HOM05D004008 ORTHO05D005383 3.1e-139 499.2 351 73.5
Pp3c5_16770 Physcomitrium patens HOM05D004008 ORTHO05D005383 2.6e-138 496.1 368 70.7
ATR0763G059 Amborella trichopoda HOM05D004008 ORTHO05D005383 1.1e-133 480.7 321 75.4
MBI18_g03839_MAGBIO Magnolia biondii HOM05D004008 ORTHO05D005383 4.3e-133 478.8 330 73.0
Cc05_g16090 Coffea canephora HOM05D004008 ORTHO05D005383 8.2e-132 474.6 339 71.1
Sc10g0004580 Simmondsia chinensis HOM05D004008 ORTHO05D005383 8.2e-132 474.6 346 69.7
SalBow8G2118 Salvia bowleyana HOM05D004008 ORTHO05D005383 1.4e-131 473.8 351 69.8
Oeu052004.1 Olea europaea HOM05D004008 ORTHO05D005383 1.8e-131 473.4 316 75.0
Migut.M01552 Erythranthe guttata HOM05D004008 ORTHO05D005383 4.1e-131 472.2 344 70.3
CDE05G3126 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 5.3e-131 471.9 346 68.8
CANSAT78G1304 Cannabis sativa HOM05D004008 ORTHO05D005383 6.9e-131 471.5 339 71.1
Os02g0168800 Oryza sativa ssp. japonica HOM05D004008 ORTHO05D005383 6.9e-131 471.5 341 71.6
TAR626G0539 Trochodendron aralioides HOM05D004008 ORTHO05D005383 9.1e-131 471.1 324 73.1
TAR626G1776 Trochodendron aralioides HOM05D004008 ORTHO05D005383 9.1e-131 471.1 324 73.1
CDE02G2123 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 1.2e-130 470.7 319 73.0
CDE11G0020 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 1.2e-130 470.7 348 68.7
Hma1.2p1_0334F.1_g128730 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 1.2e-130 470.7 348 69.0
CsaV3_3G031800 Cucumis sativus L. HOM05D004008 ORTHO05D005383 2.6e-130 469.5 324 72.8
Glyma.11G094700 Glycine max HOM05D004008 ORTHO05D005383 2.6e-130 469.5 322 73.0
Haze_11762 Corylus avellana HOM05D004008 ORTHO05D005383 3.4e-130 469.2 341 70.7
Prupe.1G348400 Prunus persica HOM05D004008 ORTHO05D005383 4.5e-130 468.8 322 73.0
HPP92_002271 Vanilla planifolia HOM05D004008 ORTHO05D005383 4.5e-130 468.8 337 70.9
Gohir.A03G165100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 5.9e-130 468.4 339 70.2
arahy.Tifrunner.gnm1.ann1.416KLQ Arachis hypogaea HOM05D004008 ORTHO05D005383 7.7e-130 468.0 322 73.6
Thecc.02G158900 Theobroma cacao HOM05D004008 ORTHO05D005383 1.0e-129 467.6 321 73.2
Actinidia12791 Actinidia chinensis HOM05D004008 ORTHO05D005383 1.3e-129 467.2 368 66.8
arahy.Tifrunner.gnm1.ann1.KXDS8S Arachis hypogaea HOM05D004008 ORTHO05D005383 1.3e-129 467.2 322 73.3
Eucgr.C00142 Eucalyptus grandis HOM05D004008 ORTHO05D005383 1.3e-129 467.2 338 70.7
Psat7g172760 Pisum sativum HOM05D004008 ORTHO05D005383 1.7e-129 466.8 329 72.0
arahy.Tifrunner.gnm1.ann1.6Z73IP Arachis hypogaea HOM05D004008 ORTHO05D005383 3.8e-129 465.7 362 68.5
MSTRG.13067 Avicennia marina HOM05D004008 ORTHO05D005383 3.8e-129 465.7 332 71.7
Cfa008746 Carpinus fangiana HOM05D004008 ORTHO05D005383 3.8e-129 465.7 348 69.3
Glyma.12G021100 Glycine max HOM05D004008 ORTHO05D005383 3.8e-129 465.7 339 70.8
RcHm_v2.0_Chr4g0446801 Rosa chinensis HOM05D004008 ORTHO05D005383 3.8e-129 465.7 329 72.0
Duzib132G0865 Durio zibethinus HOM05D004008 ORTHO05D005383 5.0e-129 465.3 320 73.4
Hma1.2p1_0637F.1_g193530 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 6.5e-129 464.9 316 73.4
Migut.H01689 Erythranthe guttata HOM05D004008 ORTHO05D005383 8.5e-129 464.5 340 70.0
VMungo1215G1012 Vigna mungo HOM05D004008 ORTHO05D005383 8.5e-129 464.5 325 73.2
Ca_26057_v3 Cicer arietinum L. HOM05D004008 ORTHO05D005383 1.1e-128 464.2 322 72.7
MD13G1004100 Malus domestica HOM05D004008 ORTHO05D005383 1.1e-128 464.2 321 73.2
Gohir.D02G188300 Gossypium hirsutum HOM05D004008 ORTHO05D005383 1.4e-128 463.8 339 69.9
Gorai.012G134300 Gossypium raimondii HOM05D004008 ORTHO05D005383 1.4e-128 463.8 329 72.3
Lsat_1_v5_gn_7_112100 Lactuca sativa HOM05D004008 ORTHO05D005383 1.4e-128 463.8 322 73.0
Medtr4g076600 Medicago truncatula HOM05D004008 ORTHO05D005383 1.9e-128 463.4 329 71.4
Potri.007G072500 Populus trichocarpa HOM05D004008 ORTHO05D005383 1.9e-128 463.4 322 72.0
PGR142G0362 Punica granatum HOM05D004008 ORTHO05D005383 1.9e-128 463.4 366 66.7
GSVIVG01002505001 Vitis vinifera HOM05D004008 ORTHO05D005383 1.9e-128 463.4 322 73.0
PSO541G2232 Papaver somniferum HOM05D004008 ORTHO05D005383 2.5e-128 463.0 344 68.9
PSO675G0755 Papaver somniferum HOM05D004008 ORTHO05D005383 2.5e-128 463.0 344 69.2
Glyma.01G227400 Glycine max HOM05D004008 ORTHO05D005383 3.2e-128 462.6 322 73.3
Gorai.005G211000 Gossypium raimondii HOM05D004008 ORTHO05D005383 3.2e-128 462.6 339 69.6
CSS0024885 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 4.2e-128 462.2 334 71.6
Zm00001eb207370 Zea mays HOM05D004008 ORTHO05D005383 4.2e-128 462.2 341 68.3
Nitab4.5_0001791g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 5.5e-128 461.8 361 68.1
MD16G1003400 Malus domestica HOM05D004008 ORTHO05D005383 7.2e-128 461.5 321 72.9
unitig_21.g20251 Utricularia gibba HOM05D004008 ORTHO05D005383 7.2e-128 461.5 333 70.9
CiPaw.01G129500 Carya illinoinensis HOM05D004008 ORTHO05D005383 9.4e-128 461.1 335 70.1
Potri.005G091600 Populus trichocarpa HOM05D004008 ORTHO05D005383 9.4e-128 461.1 322 71.7
QL12p007515 Quercus lobata HOM05D004008 ORTHO05D005383 9.4e-128 461.1 323 72.1
RcHm_v2.0_Chr1g0330101 Rosa chinensis HOM05D004008 ORTHO05D005383 9.4e-128 461.1 321 71.3
Aqoxy6G00207 Aquilegia oxysepala HOM05D004008 ORTHO05D005383 1.2e-127 460.7 316 73.4
HanXRQChr05g0153591 Helianthus annuus HOM05D004008 ORTHO05D005383 1.2e-127 460.7 339 70.5
EL10Ac2g02758 Beta vulgaris HOM05D004008 ORTHO05D005383 1.6e-127 460.3 322 70.8
HanXRQChr01g0007731 Helianthus annuus HOM05D004008 ORTHO05D005383 1.6e-127 460.3 337 70.3
SMO364G0819 Selaginella moellendorffii HOM05D004008 ORTHO05D005383 1.6e-127 460.3 353 68.6
ClCG10G012060 Citrullus lanatus HOM05D004008 ORTHO05D005383 2.1e-127 459.9 336 70.2
Sed0006741 Sechium edule HOM05D004008 ORTHO05D005383 2.7e-127 459.5 322 71.7
TWI75G1091 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 2.7e-127 459.5 332 70.8
Ciclev10031858m.g Citrus clementina HOM05D004008 ORTHO05D005383 3.6e-127 459.1 310 74.5
COL.COLO4_33043 Corchorus olitorius HOM05D004008 ORTHO05D005383 3.6e-127 459.1 336 70.5
Peaxi162Scf00452g00831 Petunia axillaris HOM05D004008 ORTHO05D005383 3.6e-127 459.1 315 73.0
Phvul.011G177100 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 3.6e-127 459.1 310 75.5
FAN07G1552 Fragaria x ananassa HOM05D004008 ORTHO05D005383 6.1e-127 458.4 323 71.5
Lj1A905T43 Lonicera japonica HOM05D004008 ORTHO05D005383 7.9e-127 458.0 347 69.7
Nitab4.5_0000134g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 7.9e-127 458.0 361 67.6
Aa31LG3G18290 Aethionema arabicum HOM05D004008 ORTHO05D005383 1.0e-126 457.6 338 70.1
Ah.10g029970 Amaranthus hybridus HOM05D004008 ORTHO05D005383 1.0e-126 457.6 322 70.8
Phvul.002G034500 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 1.0e-126 457.6 310 73.9
Solyc07g066470.3 Solanum lycopersicum HOM05D004008 ORTHO05D005383 1.0e-126 457.6 339 69.6
THA.LOC104800860 Tarenaya hassleriana HOM05D004008 ORTHO05D005383 1.0e-126 457.6 340 70.9
Lalb_Chr09g0320431 Lupinus albus HOM05D004008 ORTHO05D005383 1.4e-126 457.2 322 72.0
Sopen07g034650 Solanum pennellii HOM05D004008 ORTHO05D005383 1.4e-126 457.2 339 69.6
CAN.G943.40 Capsicum annuum HOM05D004008 ORTHO05D005383 1.8e-126 456.8 351 67.8
Dinv19616 Davidia involucrata HOM05D004008 ORTHO05D005383 1.8e-126 456.8 368 64.9
Duzib248G1235 Durio zibethinus HOM05D004008 ORTHO05D005383 1.8e-126 456.8 329 70.8
Rhsim06G0054400 Rhododendron simsii HOM05D004008 ORTHO05D005383 1.8e-126 456.8 359 67.1
PGSC0003DMG400022126 Solanum tuberosum HOM05D004008 ORTHO05D005383 1.8e-126 456.8 315 72.4
TPR.G11683 Trifolium pratense HOM05D004008 ORTHO05D005383 1.8e-126 456.8 348 67.8
TWI12G0055 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 1.8e-126 456.8 331 71.9
AL6G18680 Arabidopsis lyrata HOM05D004008 ORTHO05D005383 2.3e-126 456.4 338 69.2
MSTRG.14544 Avicennia marina HOM05D004008 ORTHO05D005383 2.3e-126 456.4 331 70.7
FAN12G0417 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.3e-126 456.4 329 70.8
A03p03710 Brassica napus HOM05D004008 ORTHO05D005383 3.0e-126 456.1 338 70.1
BraA03t09719Z Brassica rapa HOM05D004008 ORTHO05D005383 3.0e-126 456.1 338 70.1
Manes.11G103000 Manihot esculenta HOM05D004008 ORTHO05D005383 3.0e-126 456.1 336 70.2
AT5G08280 Arabidopsis thaliana HOM05D004008 ORTHO05D005383 5.1e-126 455.3 338 69.2
Dinv42507 Davidia involucrata HOM05D004008 ORTHO05D005383 6.7e-126 454.9 314 72.3
LjContig00222g0009052 Lotus japonicus HOM05D004008 ORTHO05D005383 6.7e-126 454.9 333 70.9
Cpa.g.sc43.43 Carica papaya HOM05D004008 ORTHO05D005383 8.8e-126 454.5 330 71.2
BcaNung05097 Brassica carinata HOM05D004008 ORTHO05D005383 1.1e-125 454.1 334 70.1
C09p68660 Brassica napus HOM05D004008 ORTHO05D005383 1.1e-125 454.1 334 70.1
Sp6g34680 Schrenkiella parvula HOM05D004008 ORTHO05D005383 1.1e-125 454.1 341 69.2
Hund13394 Selenicereus undatus HOM05D004008 ORTHO05D005383 1.1e-125 454.1 344 68.6
FvH4_7g04700 Fragaria vesca HOM05D004008 ORTHO05D005383 1.5e-125 453.8 321 70.4
FAN10G2193 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.5e-125 453.8 321 70.4
Peaxi162Scf00006g00139 Petunia axillaris HOM05D004008 ORTHO05D005383 1.5e-125 453.8 371 65.2
BraA02t04947Z Brassica rapa HOM05D004008 ORTHO05D005383 2.0e-125 453.4 346 68.5
C03p04200 Brassica napus HOM05D004008 ORTHO05D005383 2.6e-125 453.0 334 70.1
A10p28400 Brassica napus HOM05D004008 ORTHO05D005383 3.3e-125 452.6 334 69.5
BraA10t44887Z Brassica rapa HOM05D004008 ORTHO05D005383 3.3e-125 452.6 334 69.5
C02p03470 Brassica napus HOM05D004008 ORTHO05D005383 4.4e-125 452.2 338 68.9
AUR62031735 Chenopodium quinoa HOM05D004008 ORTHO05D005383 4.4e-125 452.2 362 64.9
BcaB01g05618 Brassica carinata HOM05D004008 ORTHO05D005383 7.4e-125 451.4 312 73.4
BolC3t12952H Brassica oleracea HOM05D004008 ORTHO05D005383 7.4e-125 451.4 312 73.4
Carub.0006s0716 Capsella rubella HOM05D004008 ORTHO05D005383 7.4e-125 451.4 338 69.2
CARHR204850 Cardamine hirsuta HOM05D004008 ORTHO05D005383 7.4e-125 451.4 338 68.6
Zm00001eb233020 Zea mays HOM05D004008 ORTHO05D005383 7.4e-125 451.4 299 73.9
BolC2t06308H Brassica oleracea HOM05D004008 ORTHO05D005383 9.7e-125 451.1 338 68.9
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.3e-124 450.7 310 72.6
FAN03G0704 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.8e-124 449.5 318 70.4
BolC9t59612H Brassica oleracea HOM05D004008 ORTHO05D005383 3.7e-124 449.1 334 69.2
Thhalv10013814m.g Eutrema salsugineum HOM05D004008 ORTHO05D005383 4.8e-124 448.7 333 69.1
ECA248G2166 Erigeron canadensis HOM05D004008 ORTHO05D005383 6.3e-124 448.4 305 74.4
SEGI_21965 Sequoiadendron giganteum HOM05D004008 ORTHO05D005383 6.3e-124 448.4 298 74.8
SGA_v2.0_scaffold186G40215 Striga asiatica HOM05D004008 ORTHO05D005383 1.1e-123 447.6 349 67.3
AUR62032620 Chenopodium quinoa HOM05D004008 ORTHO05D005383 1.4e-123 447.2 359 65.2
Gohir.A04G108500 Gossypium hirsutum HOM05D004008 ORTHO05D005383 1.4e-123 447.2 329 70.5
FAN17G0554 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.4e-123 446.4 300 74.3
VMungo1127G2017 Vigna mungo HOM05D004008 ORTHO05D005383 4.1e-123 445.7 320 70.3
FAN06G1123 Fragaria x ananassa HOM05D004008 ORTHO05D005383 8.5e-121 438.0 357 64.1
FAN06G2867 Fragaria x ananassa HOM05D004008 ORTHO05D005383 8.5e-121 438.0 357 64.1
Lj4g0025599 Lotus japonicus HOM05D004008 ORTHO05D005383 1.1e-120 437.6 357 65.0
SGA_v2.0_scaffold7G03592 Striga asiatica HOM05D004008 ORTHO05D005383 1.4e-120 437.2 335 68.4
Sabra07G0061100 Salix brachista HOM05D004008 ORTHO05D005383 4.2e-120 435.6 299 72.9
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 5.5e-120 435.3 294 74.1
Sabra05G0076100 Salix brachista HOM05D004008 ORTHO05D005383 4.7e-119 432.2 299 72.6
MELO3C024010.2 Cucumis melo HOM05D004008 ORTHO05D005383 3.0e-118 429.5 283 75.6
Cre16.g663900 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D005383 6.7e-118 428.3 339 65.8
vmacro11667 Vaccinium macrocarpon HOM05D004008 ORTHO05D005383 6.7e-118 428.3 458 55.5
CSS0025050 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 1.1e-117 427.6 333 67.9
Gohir.D04G148100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 1.1e-117 427.6 283 76.7
DCAR_013737 Daucus carota HOM05D004008 ORTHO05D005383 3.5e-114 416.0 297 71.0
BcaB08g37268 Brassica carinata HOM05D004008 ORTHO05D005383 1.0e-113 414.5 334 65.6
BcaC03g13214 Brassica carinata HOM05D004008 ORTHO05D005383 1.8e-110 403.7 345 62.9
MCO01G747 Micromonas commoda HOM05D004008 ORTHO05D005383 1.8e-110 403.7 313 66.1
TAR624G0715 Trochodendron aralioides HOM05D004008 ORTHO05D005383 8.2e-108 394.8 279 72.8
PRCOL_00005560 Prasinoderma coloniale HOM05D004008 ORTHO05D005383 1.1e-99 367.9 291 63.2
AagrBONN_evm.TU.Sc2ySwM_117.3714 Anthoceros agrestis HOM05D004008 ORTHO05D005383 1.4e-94 350.9 326 62.0
Sed0020742 Sechium edule HOM05D004008 ORTHO05D005383 8.3e-92 341.7 246 71.5
Oeu001944.1 Olea europaea HOM05D004008 ORTHO05D005383 1.3e-89 334.3 219 75.8
FvH4_4g37020 Fragaria vesca HOM05D004008 ORTHO05D005383 1.1e-88 331.3 233 73.0
Haze_26918 Corylus avellana HOM05D004008 ORTHO05D163716 6.8e-70 268.9 305 49.8
Nn7g38125 Nelumbo nucifera HOM05D004008 ORTHO05D005383 3.1e-62 243.4 159 74.8
arahy.Tifrunner.gnm1.ann1.VI50KN Arachis hypogaea HOM05D004008 ORTHO05D005383 4.0e-62 243.0 159 75.5
Psat5g025240 Pisum sativum HOM05D004008 ORTHO05D005383 2.0e-61 240.7 274 51.5
Actinidia07354 Actinidia chinensis HOM05D004008 ORTHO05D005383 8.7e-49 198.7 165 64.2
Cre02.g113850 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D145669 2.8e-39 167.2 323 36.5
Psat5g278360 Pisum sativum HOM05D004008 ORTHO05D000002 8.1e-39 165.6 113 69.0
Glyma.11G015433 Glycine max HOM05D004008 ORTHO05D005383 5.3e-38 162.9 112 71.4
BcaC07g39332 Brassica carinata HOM05D004008 ORTHO05D032875 2.1e-34 151.0 160 53.8
C08p23470 Brassica napus HOM05D004008 ORTHO05D032875 6.0e-34 149.4 190 48.4
BolC8t49976H Brassica oleracea HOM05D004008 ORTHO05D032875 6.0e-34 149.4 190 48.4
BcaC08g43816 Brassica carinata HOM05D004008 ORTHO05D013026 3.0e-25 120.6 99 62.6
BcaC04g20718 Brassica carinata HOM05D004008 ORTHO05D027220 3.9e-25 120.2 99 63.6
C09p39940 Brassica napus HOM05D004008 ORTHO05D027220 3.9e-25 120.2 99 63.6
C03p57930 Brassica napus HOM05D004008 ORTHO05D027220 6.7e-25 119.4 99 63.6
C02p56520 Brassica napus HOM05D000109 ORTHO05D000210 1.1e-24 118.6 95 65.3
BcaC03g17816 Brassica carinata HOM05D003055 ORTHO05D013026 3.7e-23 113.6 104 56.7
BolC9t56891H Brassica oleracea HOM05D004008 ORTHO05D013026 3.7e-23 113.6 103 59.2
C02p58390 Brassica napus HOM05D003055 ORTHO05D013026 3.1e-22 110.5 103 57.3
CBR_g55786 Chara braunii HOM05D001993 ORTHO05D004040 4.3e-16 90.1 123 51.2
BolC3t18065H Brassica oleracea HOM05D003055 ORTHO05D013026 9.7e-16 89.0 62 71.0
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 5.9e-13 79.7 49 73.5
TPR.G13755 Trifolium pratense HOM05D004008 ORTHO05D410752 2.9e-12 77.4 67 64.2
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 1.2e-10 72.0 68 63.2


User provided reference genes

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