Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g48045 Chara braunii HOM05D005980 ORTHO05D007618 0.0e+00 1097.8 569 100.0
Mapoly0061s0053 Marchantia polymorpha HOM05D005980 ORTHO05D007618 1.4e-49 201.8 247 44.1
Pp3c3_26950 Physcomitrium patens HOM05D005980 ORTHO05D007618 2.2e-47 194.5 247 41.7
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 3.2e-46 190.7 249 43.8
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 3.2e-46 190.7 249 43.8
Pp3c10_12300 Physcomitrium patens HOM05D005980 ORTHO05D007618 7.1e-46 189.5 239 42.7
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 3.5e-45 187.2 252 42.5
AagrBONN_evm.TU.Sc2ySwM_228.94 Anthoceros agrestis HOM05D005980 ORTHO05D007618 1.3e-44 185.3 321 37.7
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 1.7e-44 184.9 249 41.0
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 2.3e-44 184.5 249 43.0
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 3.9e-44 183.7 249 42.6
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 3.9e-44 183.7 247 43.7
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 6.6e-44 183.0 252 43.7
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 1.1e-43 182.2 336 37.2
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 1.1e-43 182.2 247 42.9
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 1.5e-43 181.8 254 41.3
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 1.5e-43 181.8 249 41.4
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 2.5e-43 181.0 249 42.2
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 2.5e-43 181.0 250 42.8
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 2.5e-43 181.0 247 42.5
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 3.3e-43 180.6 342 36.8
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 3.3e-43 180.6 249 40.2
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 3.3e-43 180.6 339 36.6
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 3.3e-43 180.6 247 41.7
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 3.3e-43 180.6 247 41.7
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 4.3e-43 180.3 248 41.1
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 7.3e-43 179.5 248 41.1
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 7.3e-43 179.5 247 42.1
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 7.3e-43 179.5 248 39.5
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 9.6e-43 179.1 252 43.3
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 9.6e-43 179.1 251 42.2
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 1.6e-42 178.3 336 36.9
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 1.6e-42 178.3 250 41.6
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 1.6e-42 178.3 248 41.9
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 2.1e-42 177.9 321 38.6
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 2.1e-42 177.9 247 41.7
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 3.6e-42 177.2 249 39.8
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 4.7e-42 176.8 319 37.6
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 4.7e-42 176.8 245 40.8
vmacro03427 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 4.7e-42 176.8 308 37.7
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 6.2e-42 176.4 211 43.6
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 6.2e-42 176.4 250 41.6
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 8.1e-42 176.0 248 40.7
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 8.1e-42 176.0 247 40.9
Sc05g0005970 Simmondsia chinensis HOM05D005980 ORTHO05D007618 8.1e-42 176.0 211 44.1
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 1.1e-41 175.6 248 41.9
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 1.1e-41 175.6 245 41.2
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 1.4e-41 175.3 254 38.6
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 1.8e-41 174.9 336 35.1
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 2.4e-41 174.5 246 41.1
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.4e-41 174.5 279 38.4
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 2.4e-41 174.5 248 39.1
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 3.1e-41 174.1 247 39.7
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 3.1e-41 174.1 247 40.5
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 4.0e-41 173.7 249 40.6
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 5.3e-41 173.3 245 40.8
CANSAT35G0447 Cannabis sativa HOM05D005980 ORTHO05D007618 5.3e-41 173.3 331 33.8
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 5.3e-41 173.3 279 38.0
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 5.3e-41 173.3 248 40.3
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 6.9e-41 172.9 279 38.0
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 6.9e-41 172.9 290 38.6
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 9.0e-41 172.6 343 37.0
ECA247G3302 Erigeron canadensis HOM05D005980 ORTHO05D007618 1.2e-40 172.2 248 39.5
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 1.5e-40 171.8 336 36.0
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 2.0e-40 171.4 249 40.2
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 3.4e-40 170.6 252 40.1
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 3.4e-40 170.6 338 34.9
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 4.4e-40 170.2 336 34.8
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 4.4e-40 170.2 248 39.5
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 4.4e-40 170.2 336 35.7
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 5.8e-40 169.9 301 38.5
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 5.8e-40 169.9 249 40.6
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 5.8e-40 169.9 306 36.9
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 7.6e-40 169.5 300 37.7
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 9.9e-40 169.1 346 34.1
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 9.9e-40 169.1 284 38.7
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 1.3e-39 168.7 342 35.4
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 1.3e-39 168.7 249 39.8
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 1.7e-39 168.3 284 38.4
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 1.7e-39 168.3 252 38.5
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 2.2e-39 167.9 284 38.0
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 2.2e-39 167.9 249 40.2
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 1.1e-38 165.6 286 38.1
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 2.4e-38 164.5 335 34.9
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 3.2e-38 164.1 330 35.8
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 3.2e-38 164.1 330 35.8
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 3.2e-38 164.1 330 35.8
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 4.2e-38 163.7 323 36.5
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 5.4e-38 163.3 330 35.5
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 5.4e-38 163.3 247 39.7
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 7.1e-38 162.9 330 35.5
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 9.3e-38 162.5 283 38.5
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 2.7e-37 161.0 199 43.7
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 1.0e-36 159.1 278 36.3
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 1.1e-35 155.6 333 35.1
Zm00001eb152010 Zea mays HOM05D005980 ORTHO05D007618 3.3e-35 154.1 288 35.8
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 5.3e-33 146.7 303 34.7
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 4.5e-32 143.7 247 38.1
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.9e-31 141.0 291 34.4
Cpa.g.sc17.56 Carica papaya HOM05D005980 ORTHO05D007618 6.0e-29 133.3 160 44.4
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 2.0e-24 118.2 247 34.8
SGA_v2.0_scaffold230G43391 Striga asiatica HOM05D005980 ORTHO05D007618 1.6e-18 98.6 124 37.9
SGA_v2.0_scaffold6G03478 Striga asiatica HOM05D005980 ORTHO05D007618 5.3e-17 93.6 124 37.9
HPP92_001893 Vanilla planifolia HOM05D005980 ORTHO05D007618 7.6e-16 89.7 141 42.6
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 2.2e-15 88.2 100 42.0
MD05G1278800 Malus domestica HOM05D005980 ORTHO05D007618 8.4e-15 86.3 77 45.5
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 2.1e-13 81.6 177 29.9
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 7.9e-13 79.7 91 44.0
MD05G1278700 Malus domestica HOM05D005980 ORTHO05D007618 6.3e-10 70.1 189 33.3
CDE01G0059 Ceratophyllum demersum HOM05D005980 ORTHO05D007618 1.8e-09 68.6 75 52.0
MBI02_g18932_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 2.6e-08 64.7 67 50.7
Lsat_1_v5_gn_1_94041 Lactuca sativa HOM05D005980 ORTHO05D007618 7.7e-08 63.2 94 43.6
Hma1.2p1_0586F.1_g183820 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 4.2e-06 57.4 70 45.7
Lsat_1_v5_gn_7_71901 Lactuca sativa HOM05D002457 ORTHO05D005750 4.2e-06 57.4 53 49.1


User provided reference genes

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