Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g45475 Chara braunii HOM05D005074 ORTHO05D006853 0.0e+00 2775.0 1559 100.0
MD04G1160300 Malus domestica HOM05D005074 ORTHO05D006853 7.8e-87 327.0 1007 27.1
Pp3c11_18160 Physcomitrium patens HOM05D005074 ORTHO05D006853 1.7e-86 325.9 1018 29.2
Thecc.05G011500 Theobroma cacao HOM05D005074 ORTHO05D006853 3.9e-86 324.7 1084 28.1
Medtr1g024820 Medicago truncatula HOM05D005074 ORTHO05D006853 5.0e-86 324.3 1026 27.8
Ciclev10011130m.g Citrus clementina HOM05D005074 ORTHO05D006853 9.5e-85 320.1 1032 27.8
TPR.G34365 Trifolium pratense HOM05D005074 ORTHO05D006853 2.8e-84 318.5 1025 27.6
Prupe.6G280900 Prunus persica HOM05D005074 ORTHO05D006853 8.1e-84 317.0 1021 26.8
Psat6g003720 Pisum sativum HOM05D005074 ORTHO05D006853 1.8e-83 315.8 1020 27.6
Lalb_Chr07g0191391 Lupinus albus HOM05D005074 ORTHO05D006853 7.5e-82 310.5 1023 27.2
Zm00001eb013510 Zea mays HOM05D005074 ORTHO05D006853 9.8e-82 310.1 1025 26.7
ClCG10G022350 Citrullus lanatus HOM05D005074 ORTHO05D006853 4.9e-81 307.8 1021 26.9
Aqoxy4G02460 Aquilegia oxysepala HOM05D005074 ORTHO05D006853 8.3e-81 307.0 1021 28.3
arahy.Tifrunner.gnm1.ann1.N71AR0 Arachis hypogaea HOM05D005074 ORTHO05D006853 1.1e-80 306.6 1026 27.2
FAN14G3962 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.1e-80 306.6 1040 25.6
Sed0022379 Sechium edule HOM05D005074 ORTHO05D006853 1.1e-80 306.6 1035 25.6
Ah.02g115540 Amaranthus hybridus HOM05D005074 ORTHO05D006853 1.9e-80 305.8 1035 26.4
Dinv13134 Davidia involucrata HOM05D005074 ORTHO05D006853 2.4e-80 305.4 1029 27.6
QL08p015889 Quercus lobata HOM05D005074 ORTHO05D006853 2.4e-80 305.4 1035 25.4
Ca_13410_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 5.4e-80 304.3 1020 27.1
Ca_13419_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 5.4e-80 304.3 1020 27.1
Sabra16G0116100 Salix brachista HOM05D005074 ORTHO05D006853 5.4e-80 304.3 1022 27.6
Atru.chr8.2282 Acer truncatum HOM05D005074 ORTHO05D006853 1.2e-79 303.1 1019 27.3
PGSC0003DMG400006257 Solanum tuberosum HOM05D005074 ORTHO05D006853 1.2e-79 303.1 1020 26.3
CSS0047541 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 1.6e-79 302.8 1030 27.4
RcHm_v2.0_Chr3g0462521 Rosa chinensis HOM05D005074 ORTHO05D006853 1.6e-79 302.8 1020 26.3
CSS0046053 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 2.7e-79 302.0 1030 27.4
FvH4_6g11090 Fragaria vesca HOM05D005074 ORTHO05D006853 3.5e-79 301.6 1032 25.7
Potri.016G120200 Populus trichocarpa HOM05D005074 ORTHO05D006853 3.5e-79 301.6 1025 26.4
Glyma.01G117800 Glycine max HOM05D005074 ORTHO05D006853 4.6e-79 301.2 1014 26.4
FAN05G5223 Fragaria x ananassa HOM05D005074 ORTHO05D006853 6.0e-79 300.8 1022 25.6
FAN02G3586 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.0e-78 300.1 1028 25.7
TWI74G0571 Tripterygium wilfordii HOM05D005074 ORTHO05D006853 1.0e-78 300.1 1030 26.7
CiPaw.10G158300 Carya illinoinensis HOM05D005074 ORTHO05D006853 1.3e-78 299.7 1023 26.1
Solyc09g005100.4 Solanum lycopersicum HOM05D005074 ORTHO05D006853 1.7e-78 299.3 1023 26.6
Sopen09g001080 Solanum pennellii HOM05D005074 ORTHO05D006853 5.1e-78 297.7 1023 26.5
Peaxi162Scf01132g00134 Petunia axillaris HOM05D005074 ORTHO05D006853 6.6e-78 297.4 1012 26.7
Haze_21033 Corylus avellana HOM05D005074 ORTHO05D006853 8.6e-78 297.0 1021 27.6
DCAR_006624 Daucus carota HOM05D005074 ORTHO05D006853 1.1e-77 296.6 1013 29.1
Lj2C71T3 Lonicera japonica HOM05D005074 ORTHO05D006853 1.5e-77 296.2 1007 27.5
Nitab4.5_0000195g0210 Nicotiana tabacum HOM05D005074 ORTHO05D006853 1.5e-77 296.2 1014 26.8
AUR62030501 Chenopodium quinoa HOM05D005074 ORTHO05D006853 1.9e-77 295.8 1018 25.3
MELO3C009144.2 Cucumis melo HOM05D005074 ORTHO05D006853 3.3e-77 295.0 1021 26.6
Nitab4.5_0012964g0020 Nicotiana tabacum HOM05D005074 ORTHO05D006853 4.3e-77 294.7 1014 26.4
CAN.G41.5 Capsicum annuum HOM05D005074 ORTHO05D006853 7.3e-77 293.9 1020 26.7
Cfa017171 Carpinus fangiana HOM05D005074 ORTHO05D006853 2.1e-76 292.4 1036 27.8
Lj5g0028092 Lotus japonicus HOM05D005074 ORTHO05D006853 2.1e-76 292.4 1024 27.6
TAR633G0154 Trochodendron aralioides HOM05D005074 ORTHO05D006853 2.1e-76 292.4 1015 27.3
VMungo0331G1905 Vigna mungo HOM05D005074 ORTHO05D006853 2.8e-76 292.0 1017 26.6
CsaV3_3G033540 Cucumis sativus L. HOM05D005074 ORTHO05D006853 4.7e-76 291.2 1021 26.0
MBI03_g18944_MAGBIO Magnolia biondii HOM05D005074 ORTHO05D006853 8.1e-76 290.4 1015 26.8
MSTRG.18991 Avicennia marina HOM05D005074 ORTHO05D006853 2.3e-75 288.9 1022 27.0
Phvul.010G073200 Phaseolus vulgaris HOM05D005074 ORTHO05D006853 2.3e-75 288.9 1018 26.6
CANSAT35G1267 Cannabis sativa HOM05D005074 ORTHO05D006853 6.8e-75 287.3 1037 25.6
EL10Ac5g12524 Beta vulgaris HOM05D005074 ORTHO05D006853 2.0e-74 285.8 1013 26.3
Cc06_g01060 Coffea canephora HOM05D005074 ORTHO05D006853 5.8e-74 284.3 1019 27.0
Mapoly0120s0055 Marchantia polymorpha HOM05D005074 ORTHO05D006853 5.8e-74 284.3 995 27.3
PGR031G0257 Punica granatum HOM05D005074 ORTHO05D006853 5.8e-74 284.3 1016 26.3
Actinidia29087 Actinidia chinensis HOM05D005074 ORTHO05D006853 7.6e-74 283.9 1010 27.2
AUR62030792 Chenopodium quinoa HOM05D005074 ORTHO05D006853 9.9e-74 283.5 1018 26.1
THA.LOC104816650 Tarenaya hassleriana HOM05D005074 ORTHO05D006853 4.9e-73 281.2 1014 26.3
Hma1.2p1_0501F.1_g167650 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 1.4e-72 279.6 1013 26.4
Sp6g40630 Schrenkiella parvula HOM05D005074 ORTHO05D006853 1.4e-72 279.6 1027 25.6
Duzib128G0037 Durio zibethinus HOM05D005074 ORTHO05D006853 4.1e-72 278.1 1017 26.2
Nn2g10923 Nelumbo nucifera HOM05D005074 ORTHO05D006853 4.1e-72 278.1 1019 26.0
SMO119G0484 Selaginella moellendorffii HOM05D005074 ORTHO05D006853 5.4e-72 277.7 1015 25.2
COL.COLO4_14500 Corchorus olitorius HOM05D005074 ORTHO05D006853 7.1e-72 277.3 1052 27.1
HanXRQChr12g0383191 Helianthus annuus HOM05D005074 ORTHO05D006853 9.2e-72 276.9 1015 25.6
BraA10t45403Z Brassica rapa HOM05D005074 ORTHO05D006853 1.7e-70 272.7 1013 25.1
Thhalv10012562m.g Eutrema salsugineum HOM05D005074 ORTHO05D006853 2.3e-70 272.3 1046 25.3
A10p33710 Brassica napus HOM05D005074 ORTHO05D006853 3.9e-70 271.6 1013 25.1
AagrBONN_evm.TU.Sc2ySwM_362.194 Anthoceros agrestis HOM05D005074 ORTHO05D006853 1.5e-69 269.6 709 30.2
ATR0716G066 Amborella trichopoda HOM05D005074 ORTHO05D006853 1.9e-69 269.2 1018 29.0
Rhsim05G0219800 Rhododendron simsii HOM05D005074 ORTHO05D006853 1.9e-69 269.2 1021 26.2
PSO384G2802 Papaver somniferum HOM05D005074 ORTHO05D006853 3.3e-69 268.5 1013 25.7
SGA_v2.0_scaffold85G26714 Striga asiatica HOM05D005074 ORTHO05D006853 4.3e-69 268.1 1020 26.2
AT5G01310 Arabidopsis thaliana HOM05D005074 ORTHO05D006853 1.2e-68 266.5 1013 25.4
BolC9t60195H Brassica oleracea HOM05D005074 ORTHO05D006853 1.2e-68 266.5 1013 24.8
C09p74610 Brassica napus HOM05D005074 ORTHO05D006853 1.6e-68 266.2 1012 24.8
Carub.0006s0050 Capsella rubella HOM05D005074 ORTHO05D006853 2.1e-68 265.8 1032 24.2
Gohir.D04G133000 Gossypium hirsutum HOM05D005074 ORTHO05D006853 2.8e-68 265.4 1026 26.2
Hund10968 Selenicereus undatus HOM05D005074 ORTHO05D006853 2.8e-68 265.4 985 25.8
CARHR211670 Cardamine hirsuta HOM05D005074 ORTHO05D006853 3.6e-68 265.0 1027 24.6
PSO339G4313 Papaver somniferum HOM05D005074 ORTHO05D006853 1.1e-67 263.5 1015 25.3
Gorai.012G116900 Gossypium raimondii HOM05D005074 ORTHO05D006853 1.4e-67 263.1 1026 25.6
Gohir.A04G093700 Gossypium hirsutum HOM05D005074 ORTHO05D006853 6.9e-67 260.8 1021 26.2
GSVIVG01003941001 Vitis vinifera HOM05D005074 ORTHO05D006853 1.5e-66 259.6 1017 25.0
AL6G10830 Arabidopsis lyrata HOM05D005074 ORTHO05D006853 2.0e-66 259.2 1022 25.1
vmacro20302 Vaccinium macrocarpon HOM05D005074 ORTHO05D006853 5.8e-66 257.7 702 29.6
SalBow5G0276 Salvia bowleyana HOM05D005074 ORTHO05D006853 3.8e-65 255.0 1021 25.1
SalBow5G3519 Salvia bowleyana HOM05D005074 ORTHO05D006853 6.4e-65 254.2 1021 24.9
Migut.J00131 Erythranthe guttata HOM05D005074 ORTHO05D006853 1.0e-62 246.9 1036 23.4
HPP92_025102 Vanilla planifolia HOM05D005074 ORTHO05D006853 1.3e-62 246.5 974 24.8
Aa31LG1G22940 Aethionema arabicum HOM05D005074 ORTHO05D006853 1.7e-62 246.1 1013 24.4
Sc22g0002590 Simmondsia chinensis HOM05D005074 ORTHO05D006853 9.6e-61 240.4 738 27.1
Hma1.2p1_0501F.1_g167660 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 2.8e-60 238.8 549 32.2
unitig_27.g24848 Utricularia gibba HOM05D005074 ORTHO05D006853 4.8e-60 238.0 1083 23.1
CDE08G0259 Ceratophyllum demersum HOM05D005074 ORTHO05D006853 8.1e-60 237.3 526 32.7
BcaC06g31973 Brassica carinata HOM05D005074 ORTHO05D006853 4.0e-59 235.0 1029 24.0
Manes.09G106200 Manihot esculenta HOM05D005074 ORTHO05D006853 1.2e-58 233.4 530 31.7
Eucgr.A00552 Eucalyptus grandis HOM05D005074 ORTHO05D006853 8.4e-57 227.3 521 32.1
Lsat_1_v5_gn_8_100780 Lactuca sativa HOM05D005074 ORTHO05D006853 1.3e-54 219.9 1020 23.4
FAN09G4669 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.1e-53 216.9 962 23.1
Os03g0293400 Oryza sativa ssp. japonica HOM05D005074 ORTHO05D006853 4.9e-49 201.4 441 32.9
ECA236G3605 Erigeron canadensis HOM05D005074 ORTHO05D006853 2.1e-47 196.1 476 31.9
FAN09G0802 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.9e-45 189.5 294 39.5
arahy.Tifrunner.gnm1.ann1.W8IS2K Arachis hypogaea HOM05D005074 ORTHO05D006853 1.8e-43 183.0 418 33.7
Aa31LG1G22950 Aethionema arabicum HOM05D005074 ORTHO05D006853 2.5e-40 172.6 706 24.2
Aa31LG8G1910 Aethionema arabicum HOM05D005074 ORTHO05D006853 8.7e-38 164.1 697 23.4
Aa31LG1G22960 Aethionema arabicum HOM05D005074 ORTHO05D006853 6.3e-36 157.9 199 42.7
Cpa.g.sc120.24 Carica papaya HOM05D005074 ORTHO05D006853 1.4e-32 146.7 176 40.3
Oeu063389.1 Olea europaea HOM05D005074 ORTHO05D006853 4.2e-32 145.2 190 38.9
Aa31sc2673G10 Aethionema arabicum HOM05D005074 ORTHO05D006853 3.1e-27 129.0 221 33.5
MD05G1095500 Malus domestica HOM05D005074 ORTHO05D006853 9.1e-27 127.5 147 42.2
SHI12858 Sapria himalayana HOM05D005074 ORTHO05D006853 1.0e-22 114.0 135 44.4
Cre06.g297904 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D006853 5.1e-22 111.7 150 39.3
Aa31LG1G22970 Aethionema arabicum HOM05D005074 ORTHO05D006853 6.3e-20 104.8 99 52.5
RcHm_v2.0_Chr3g0462501 Rosa chinensis HOM05D005074 ORTHO05D006853 1.8e-19 103.2 118 39.0
Ca_06765_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 5.3e-19 101.7 89 57.3
FAN09G1779 Fragaria x ananassa HOM05D005074 ORTHO05D006853 5.3e-19 101.7 205 32.2
Aa31sc1955G20 Aethionema arabicum HOM05D005074 ORTHO05D006853 5.9e-18 98.2 100 47.0
Oeu033574.2 Olea europaea HOM05D005074 ORTHO05D006853 1.7e-17 96.7 174 32.8
FAN09G0145 Fragaria x ananassa HOM05D005074 ORTHO05D006853 3.0e-14 85.9 172 32.0
MD12G1172800 Malus domestica HOM05D005074 ORTHO05D006853 4.4e-13 82.0 99 38.4
Medtr8g092520 Medicago truncatula HOM05D005074 ORTHO05D006853 1.3e-12 80.5 64 65.6
Cre05.g239450 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D034455 7.0e-11 74.7 195 29.2
AagrBONN_evm.TU.Sc2ySwM_344.4419 Anthoceros agrestis HOM05D005074 ORTHO05D006853 1.3e-09 70.5 72 44.4
Cre02.g079150 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D034455 2.2e-09 69.7 156 31.4
Glyma.U000501 Glycine max HOM05D005074 ORTHO05D006853 1.4e-06 60.5 170 27.1
Hund15823 Selenicereus undatus HOM05D003873 ORTHO05D004127 6.7e-06 58.2 104 43.3


User provided reference genes

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