Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39228 Chara braunii HOM05D001887 ORTHO05D006549 9.7e-274 946.4 558 100.0
TAR636G0264 Trochodendron aralioides HOM05D001887 ORTHO05D006549 3.2e-136 489.6 358 68.7
Cfa012332 Carpinus fangiana HOM05D001887 ORTHO05D006549 1.6e-135 487.3 369 66.1
Mapoly0007s0092 Marchantia polymorpha HOM05D001887 ORTHO05D006549 1.6e-135 487.3 376 66.0
QL12p008620 Quercus lobata HOM05D001887 ORTHO05D006549 8.0e-135 485.0 358 67.6
SEGI_01687 Sequoiadendron giganteum HOM05D001887 ORTHO05D006549 8.0e-135 485.0 376 66.2
Zm00001eb208390 Zea mays HOM05D001887 ORTHO05D006549 8.0e-135 485.0 358 67.9
AagrBONN_evm.TU.Sc2ySwM_344.3532 Anthoceros agrestis HOM05D001887 ORTHO05D006549 1.4e-134 484.2 358 67.9
Haze_08360 Corylus avellana HOM05D001887 ORTHO05D006549 4.0e-134 482.6 369 65.6
Sopen08g026310 Solanum pennellii HOM05D001887 ORTHO05D006549 6.8e-134 481.9 378 64.3
TWI81G0509 Tripterygium wilfordii HOM05D001887 ORTHO05D006549 6.8e-134 481.9 358 66.5
VMungo1215G0420 Vigna mungo HOM05D001887 ORTHO05D006549 6.8e-134 481.9 358 67.6
Peaxi162Scf00301g00615 Petunia axillaris HOM05D001887 ORTHO05D006549 8.8e-134 481.5 378 64.3
Solyc08g077800.4 Solanum lycopersicum HOM05D001887 ORTHO05D006549 8.8e-134 481.5 378 64.6
Sed0013079 Sechium edule HOM05D001887 ORTHO05D006549 1.5e-133 480.7 363 65.3
PGSC0003DMG400026214 Solanum tuberosum HOM05D001887 ORTHO05D006549 1.5e-133 480.7 358 66.8
arahy.Tifrunner.gnm1.ann1.B9CQCD Arachis hypogaea HOM05D001887 ORTHO05D006549 2.0e-133 480.3 358 66.8
arahy.Tifrunner.gnm1.ann1.HW9JRE Arachis hypogaea HOM05D001887 ORTHO05D006549 2.0e-133 480.3 358 66.8
Ciclev10024418m.g Citrus clementina HOM05D001887 ORTHO05D006549 2.0e-133 480.3 363 65.3
Nn1g00744 Nelumbo nucifera HOM05D001887 ORTHO05D006549 2.0e-133 480.3 359 66.6
Actinidia02198 Actinidia chinensis HOM05D001887 ORTHO05D006549 2.6e-133 479.9 358 66.2
Nitab4.5_0004227g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 2.6e-133 479.9 371 65.2
vmacro00747 Vaccinium macrocarpon HOM05D001887 ORTHO05D006549 4.4e-133 479.2 367 65.7
ATR0665G232 Amborella trichopoda HOM05D001887 ORTHO05D006549 5.7e-133 478.8 360 66.7
CAN.G572.14 Capsicum annuum HOM05D001887 ORTHO05D006549 7.5e-133 478.4 371 64.7
CiPaw.11G072100 Carya illinoinensis HOM05D001887 ORTHO05D006549 7.5e-133 478.4 358 66.8
MD06G1046600 Malus domestica HOM05D001887 ORTHO05D006549 7.5e-133 478.4 358 67.0
Nitab4.5_0003335g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 7.5e-133 478.4 371 65.0
Prupe.5G054900 Prunus persica HOM05D001887 ORTHO05D006549 9.8e-133 478.0 369 65.9
RcHm_v2.0_Chr7g0205791 Rosa chinensis HOM05D001887 ORTHO05D006549 9.8e-133 478.0 365 65.5
Gorai.004G191700 Gossypium raimondii HOM05D001887 ORTHO05D006549 1.3e-132 477.6 373 64.3
Rhsim07G0136100 Rhododendron simsii HOM05D001887 ORTHO05D006549 1.3e-132 477.6 362 66.9
CSS0023599 Camellia sinensis var. sinensis HOM05D001887 ORTHO05D006549 1.7e-132 477.2 369 65.3
Duzib205G1274 Durio zibethinus HOM05D001887 ORTHO05D006549 1.7e-132 477.2 358 66.2
Gohir.D08G182700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 2.2e-132 476.9 373 64.3
Lj2g0012346 Lotus japonicus HOM05D001887 ORTHO05D006549 2.2e-132 476.9 358 66.8
Ca_24613_v3 Cicer arietinum L. HOM05D001887 ORTHO05D006549 2.8e-132 476.5 358 65.9
FAN13G0006 Fragaria x ananassa HOM05D001887 ORTHO05D006549 2.8e-132 476.5 361 65.7
FAN18G1605 Fragaria x ananassa HOM05D001887 ORTHO05D006549 4.9e-132 475.7 361 65.4
FvH4_5g20470 Fragaria vesca HOM05D001887 ORTHO05D006549 6.3e-132 475.3 361 65.4
Glyma.11G038500 Glycine max HOM05D001887 ORTHO05D006549 6.3e-132 475.3 358 66.8
Potri.001G150400 Populus trichocarpa HOM05D001887 ORTHO05D006549 6.3e-132 475.3 358 66.8
CANSAT21G2194 Cannabis sativa HOM05D001887 ORTHO05D006549 1.1e-131 474.6 367 64.9
Medtr5g013480 Medicago truncatula HOM05D001887 ORTHO05D006549 1.1e-131 474.6 358 65.1
ClCG09G012670 Citrullus lanatus HOM05D001887 ORTHO05D006549 1.4e-131 474.2 362 65.5
Psat2g175720 Pisum sativum HOM05D001887 ORTHO05D006549 1.4e-131 474.2 358 65.6
Eucgr.E00349 Eucalyptus grandis HOM05D001887 ORTHO05D006549 1.8e-131 473.8 358 65.6
PGR042G1059 Punica granatum HOM05D001887 ORTHO05D006549 3.1e-131 473.0 355 65.4
COL.COLO4_06683 Corchorus olitorius HOM05D001887 ORTHO05D006549 4.1e-131 472.6 376 63.8
Manes.01G089700 Manihot esculenta HOM05D001887 ORTHO05D006549 5.4e-131 472.2 358 65.6
Os03g0100400 Oryza sativa ssp. japonica HOM05D001887 ORTHO05D006549 5.4e-131 472.2 358 66.5
Aqoxy7G00853 Aquilegia oxysepala HOM05D001887 ORTHO05D006549 7.0e-131 471.9 361 66.5
MELO3C003338.2 Cucumis melo HOM05D001887 ORTHO05D006549 7.0e-131 471.9 365 64.1
Phvul.002G001900 Phaseolus vulgaris HOM05D001887 ORTHO05D006549 9.1e-131 471.5 364 65.9
Hund14477 Selenicereus undatus HOM05D001887 ORTHO05D006549 9.1e-131 471.5 362 65.5
Thecc.03G239300 Theobroma cacao HOM05D001887 ORTHO05D006549 9.1e-131 471.5 358 65.4
SMO118G0017 Selaginella moellendorffii HOM05D001887 ORTHO05D006549 1.2e-130 471.1 371 64.2
GSVIVG01002051001 Vitis vinifera HOM05D001887 ORTHO05D006549 1.6e-130 470.7 359 66.0
DCAR_000656 Daucus carota HOM05D001887 ORTHO05D006549 2.0e-130 470.3 356 66.0
Lj8C277T15 Lonicera japonica HOM05D001887 ORTHO05D006549 2.0e-130 470.3 386 63.2
Lalb_Chr09g0324141 Lupinus albus HOM05D001887 ORTHO05D006549 3.5e-130 469.5 358 65.4
MBI04_g38561_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 3.5e-130 469.5 383 62.4
AUR62007171 Chenopodium quinoa HOM05D001887 ORTHO05D006549 7.7e-130 468.4 363 64.5
Sabra01G0120200 Salix brachista HOM05D001887 ORTHO05D006549 7.7e-130 468.4 358 66.5
AL7G48280 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 1.7e-129 467.2 379 63.3
ECA246G2103 Erigeron canadensis HOM05D001887 ORTHO05D006549 1.7e-129 467.2 358 67.0
CsaV3_3G049790 Cucumis sativus L. HOM05D001887 ORTHO05D006549 2.9e-129 466.5 363 63.9
PSO675G3297 Papaver somniferum HOM05D001887 ORTHO05D006549 2.9e-129 466.5 371 64.7
A04p14190 Brassica napus HOM05D001887 ORTHO05D006549 8.6e-129 464.9 375 63.2
Thhalv10027633m.g Eutrema salsugineum HOM05D001887 ORTHO05D006549 8.6e-129 464.9 358 64.8
Pp3c18_11670 Physcomitrium patens HOM05D001887 ORTHO05D006549 1.1e-128 464.5 362 65.7
CDE02G0676 Ceratophyllum demersum HOM05D001887 ORTHO05D006549 1.9e-128 463.8 372 62.9
BraA04t17079Z Brassica rapa HOM05D001887 ORTHO05D006549 2.5e-128 463.4 375 62.9
THA.LOC104807928 Tarenaya hassleriana HOM05D001887 ORTHO05D006549 2.5e-128 463.4 365 62.7
Aa31LG9G15130 Aethionema arabicum HOM05D001887 ORTHO05D006549 3.3e-128 463.0 379 61.7
Carub.0007s3432 Capsella rubella HOM05D001887 ORTHO05D006549 4.2e-128 462.6 369 64.0
BcaC02g08980 Brassica carinata HOM05D001887 ORTHO05D006549 5.5e-128 462.2 356 64.9
C04p48230 Brassica napus HOM05D001887 ORTHO05D006549 5.5e-128 462.2 356 64.9
BolC4t26415H Brassica oleracea HOM05D001887 ORTHO05D006549 5.5e-128 462.2 356 64.9
Sp7g00750 Schrenkiella parvula HOM05D001887 ORTHO05D006549 5.5e-128 462.2 379 62.5
SpUn0010_0230 Schrenkiella parvula HOM05D001887 ORTHO05D006549 5.5e-128 462.2 379 62.5
BcaB06g27602 Brassica carinata HOM05D001887 ORTHO05D006549 1.2e-127 461.1 375 62.9
Cc08_g11250 Coffea canephora HOM05D001887 ORTHO05D006549 1.2e-127 461.1 358 64.5
CARHR213220 Cardamine hirsuta HOM05D001887 ORTHO05D006549 1.0e-126 458.0 378 61.9
AL7G48350 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 1.4e-126 457.6 379 62.3
AT5G41150 Arabidopsis thaliana HOM05D001887 ORTHO05D006549 2.3e-126 456.8 365 63.3
HanXRQChr01g0016001 Helianthus annuus HOM05D001887 ORTHO05D006549 5.2e-126 455.7 362 64.4
Ah.07g199260 Amaranthus hybridus HOM05D001887 ORTHO05D006549 1.2e-125 454.5 360 63.6
Migut.E01262 Erythranthe guttata HOM05D001887 ORTHO05D006549 7.5e-125 451.8 353 63.2
Migut.E01632 Erythranthe guttata HOM05D001887 ORTHO05D006549 7.5e-125 451.8 353 63.2
HPP92_001389 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.7e-124 450.7 369 63.4
SGA_v2.0_scaffold6G03161 Striga asiatica HOM05D001887 ORTHO05D006549 1.4e-123 447.6 372 61.3
unitig_699.g19770 Utricularia gibba HOM05D001887 ORTHO05D006549 1.5e-120 437.6 353 63.5
EL10Ac5g12260 Beta vulgaris HOM05D001887 ORTHO05D006549 5.6e-120 435.6 424 56.4
Lsat_1_v5_gn_3_15381 Lactuca sativa HOM05D001887 ORTHO05D006549 4.9e-116 422.5 388 59.8
AUR62018833 Chenopodium quinoa HOM05D001887 ORTHO05D006549 1.3e-113 414.5 359 59.6
HPP92_012638 Vanilla planifolia HOM05D001887 ORTHO05D006549 4.3e-104 382.9 308 65.6
Gohir.A08G162700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 1.6e-103 380.9 295 64.1
Cpa.g.c28699.1 Carica papaya HOM05D001887 ORTHO05D006549 4.3e-96 356.3 264 68.6
Hma1.2p1_3159F.1_g333410 Hydrangea macrophylla HOM05D001887 ORTHO05D006549 5.8e-93 345.9 358 53.9
Oeu028057.3 Olea europaea HOM05D001887 ORTHO05D006549 2.2e-92 344.0 258 67.8
SalBow1G0188 Salvia bowleyana HOM05D001887 ORTHO05D006549 4.9e-92 342.8 265 66.0
TPR.G31432 Trifolium pratense HOM05D001887 ORTHO05D006549 6.0e-90 335.9 271 64.9
Dinv25138 Davidia involucrata HOM05D001887 ORTHO05D006549 1.4e-75 288.1 236 61.4
MCO16G346 Micromonas commoda HOM05D001887 ORTHO05D006549 7.9e-74 282.3 381 41.2
MSTRG.13777 Avicennia marina HOM05D001887 ORTHO05D006549 1.8e-73 281.2 353 46.7
Cre06.g311400 Chlamydomonas reinhardtii HOM05D001887 ORTHO05D006549 6.7e-73 279.3 398 43.0
Cfa026920 Carpinus fangiana HOM05D001887 ORTHO05D006549 6.0e-66 256.1 358 40.5
MBI04_g36289_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 5.5e-59 233.0 265 50.6
PRCOL_00000830 Prasinoderma coloniale HOM05D001887 ORTHO05D006549 3.1e-54 217.2 359 38.2
GSVIVG01002647001 Vitis vinifera HOM05D001887 ORTHO05D006549 5.1e-49 199.9 138 70.3
HPP92_000025 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.1e-46 192.2 137 71.5
HPP92_028027 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.0e-41 175.6 130 69.2
HPP92_002782 Vanilla planifolia HOM05D001887 ORTHO05D006549 7.4e-40 169.5 130 66.9
Atru.chr9.1202 Acer truncatum HOM05D001887 ORTHO05D006549 9.7e-40 169.1 152 60.5
Glyma.01G204533 Glycine max HOM05D001887 ORTHO05D006549 6.5e-36 156.4 104 72.1
HPP92_028028 Vanilla planifolia HOM05D001887 ORTHO05D006549 2.1e-34 151.4 132 62.1
Sc01g0007960 Simmondsia chinensis HOM05D001887 ORTHO05D006549 4.7e-34 150.2 134 56.7
Sed0025805 Sechium edule HOM05D001887 ORTHO05D006549 1.3e-31 142.1 191 44.5
Atru.chr9.1203 Acer truncatum HOM05D001887 ORTHO05D006549 4.1e-30 137.1 93 69.9
MD04G1054800 Malus domestica HOM05D001887 ORTHO05D006549 1.5e-27 128.6 120 55.8
AagrBONN_evm.TU.Sc2ySwM_362.220 Anthoceros agrestis HOM05D001887 ORTHO05D006549 8.8e-25 119.4 80 73.8
SalBow1G4075 Salvia bowleyana HOM05D001887 ORTHO05D006549 6.3e-23 113.2 89 59.6


User provided reference genes

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