Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g292 Chara braunii HOM05D001734 ORTHO05D003483 0.0e+00 2021.5 1026 100.0
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 1.5e-211 740.7 1015 43.1
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 4.8e-202 709.1 1022 41.7
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 8.3e-170 602.1 1007 38.8
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 8.8e-164 582.0 1010 36.0
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 5.4e-161 572.8 1017 35.5
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 1.0e-159 568.5 1020 35.7
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 1.3e-159 568.2 1009 35.4
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 2.3e-159 567.4 1010 36.1
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 6.6e-159 565.8 1009 35.1
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 1.1e-158 565.1 948 35.4
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 2.5e-158 563.9 1010 34.9
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 7.2e-158 562.4 1011 35.5
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 3.6e-157 560.1 1012 35.1
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 1.8e-156 557.8 1018 35.4
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 2.3e-156 557.4 1011 35.0
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 3.0e-156 557.0 1010 34.8
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 5.2e-156 556.2 1009 35.3
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 6.8e-156 555.8 1042 34.8
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 1.2e-155 555.1 1014 35.6
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 1.2e-155 555.1 1013 35.0
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 1.5e-155 554.7 1014 34.8
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 5.7e-155 552.7 1009 34.5
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 7.5e-155 552.4 1012 34.9
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 7.5e-155 552.4 1011 35.5
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 1.7e-154 551.2 1012 34.9
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 1.7e-154 551.2 1009 34.8
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 2.2e-154 550.8 1011 36.4
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 2.8e-154 550.4 1009 35.2
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 2.8e-154 550.4 1011 35.4
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 4.9e-154 549.7 1010 34.6
Solyc03g112950.4 Solanum lycopersicum HOM05D001734 ORTHO05D003483 1.4e-153 548.1 1022 34.7
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 4.1e-153 546.6 1013 35.4
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 4.1e-153 546.6 1009 35.3
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 3.5e-152 543.5 1009 34.6
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 5.9e-152 542.7 1009 35.4
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 5.9e-152 542.7 1009 35.2
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 1.0e-151 542.0 1041 34.2
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 1.3e-151 541.6 1027 33.6
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 1.7e-151 541.2 1015 34.0
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 1.7e-151 541.2 1015 34.4
Hund02744 Selenicereus undatus HOM05D001734 ORTHO05D003483 5.0e-151 539.7 1059 34.2
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 8.6e-151 538.9 962 35.3
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 1.1e-150 538.5 1014 34.1
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 1.5e-150 538.1 951 35.5
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 1.9e-150 537.7 1009 34.8
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 5.6e-150 536.2 1010 35.0
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 1.2e-149 535.0 1008 34.9
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 1.6e-149 534.6 1009 34.7
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 6.8e-148 529.3 1015 34.2
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 1.2e-147 528.5 1011 33.6
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 7.5e-147 525.8 1013 34.6
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 1.3e-146 525.0 1015 33.7
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 1.7e-146 524.6 1031 34.1
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 2.2e-146 524.2 1013 33.8
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 2.2e-146 524.2 948 34.3
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 8.3e-146 522.3 1009 34.0
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 1.1e-145 521.9 1035 32.7
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 5.4e-145 519.6 1009 33.6
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 1.2e-144 518.5 1013 33.6
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 1.2e-144 518.5 1015 33.6
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 7.8e-144 515.8 1013 33.4
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.1e-142 511.9 1020 33.9
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 3.3e-142 510.4 1009 34.3
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 4.3e-142 510.0 1050 32.5
HPP92_004868 Vanilla planifolia HOM05D001734 ORTHO05D003483 9.5e-142 508.8 969 33.7
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 5.2e-140 503.1 1011 33.5
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 1.2e-139 501.9 1048 32.7
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 3.4e-139 500.4 1009 33.7
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 4.4e-139 500.0 1079 31.3
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 5.8e-139 499.6 968 34.2
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 9.8e-139 498.8 949 34.4
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 1.7e-138 498.0 1102 31.4
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 3.2e-137 493.8 1012 33.1
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 8.6e-135 485.7 950 32.5
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 1.5e-134 485.0 1039 32.2
BraA06t25687Z Brassica rapa HOM05D001734 ORTHO05D003483 4.7e-133 479.9 895 34.0
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 5.4e-129 466.5 1011 32.1
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 9.2e-129 465.7 1009 32.2
TPR.G6034 Trifolium pratense HOM05D001734 ORTHO05D003483 7.8e-128 462.6 953 32.5
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 1.7e-127 461.5 988 32.2
FAN20G1266 Fragaria x ananassa HOM05D001734 ORTHO05D003483 5.8e-123 446.4 996 32.7
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 9.9e-123 445.7 1152 28.9
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 5.1e-119 433.3 1010 32.1
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 3.3e-102 377.5 1033 29.1
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 1.5e-94 352.1 947 28.9
Cpa.g.sc76.54 Carica papaya HOM05D001734 ORTHO05D003483 9.0e-92 342.8 696 32.9
ATR0730G152 Amborella trichopoda HOM05D001734 ORTHO05D003483 6.5e-90 336.7 623 35.3
VMungo1309G0494 Vigna mungo HOM05D001734 ORTHO05D003483 3.9e-87 327.4 588 35.2
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 2.5e-86 324.7 1019 27.5
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 5.7e-86 323.6 731 30.1
unitig_0.g1441 Utricularia gibba HOM05D001734 ORTHO05D003483 7.7e-83 313.2 625 31.7
Lj9A448G34 Lonicera japonica HOM05D001734 ORTHO05D003483 3.9e-79 300.8 513 34.1
BcaNung07276 Brassica carinata HOM05D001734 ORTHO05D003483 1.2e-72 279.3 502 36.1
CSS0038273 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 4.2e-65 254.2 440 39.5
ATR0730G231 Amborella trichopoda HOM05D001734 ORTHO05D003483 2.2e-61 241.9 408 37.0
FAN20G1174 Fragaria x ananassa HOM05D001734 ORTHO05D003483 4.0e-55 221.1 438 31.7
SEGI_11837 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 2.6e-54 218.4 373 38.9
CARHR156930 Cardamine hirsuta HOM05D001734 ORTHO05D003483 4.5e-43 181.0 278 39.6
SMO298G0008 Selaginella moellendorffii HOM05D001734 ORTHO05D003483 5.9e-43 180.6 242 40.9
SMO298G0036 Selaginella moellendorffii HOM05D001734 ORTHO05D003483 8.0e-40 170.2 233 44.2
Lj9A448G35 Lonicera japonica HOM05D001734 ORTHO05D003483 1.2e-38 166.4 230 42.6
Rhsim02G0102400 Rhododendron simsii HOM05D001734 ORTHO05D003483 3.3e-33 148.3 251 39.4
Cpa.g.sc76.53 Carica papaya HOM05D001734 ORTHO05D003483 1.1e-28 133.3 277 28.9
FAN05G4580 Fragaria x ananassa HOM05D001734 ORTHO05D003483 7.0e-28 130.6 277 30.3
VMungo1309G1151 Vigna mungo HOM05D001734 ORTHO05D003483 1.7e-26 125.9 223 30.0
SHI16990 Sapria himalayana HOM05D001734 ORTHO05D003483 4.3e-25 121.3 268 36.6
unitig_0.g1442 Utricularia gibba HOM05D001734 ORTHO05D003483 1.2e-24 119.8 231 35.5
SEGI_27751 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 7.8e-19 100.5 81 55.6
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 7.3e-17 94.0 480 25.4
MBI10_g06738_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D003483 9.5e-17 93.6 128 41.4
vmacro19388 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 2.1e-16 92.4 233 27.5
Pp3c6_3460 Physcomitrium patens HOM05D001734 ORTHO05D006943 2.8e-16 92.0 419 24.3
SHI16994 Sapria himalayana HOM05D001734 ORTHO05D003483 2.3e-15 89.0 79 49.4
SHI16993 Sapria himalayana HOM05D001734 ORTHO05D003483 5.2e-15 87.8 152 36.2
PSO675G3963 Papaver somniferum HOM05D001734 ORTHO05D003483 6.8e-15 87.4 131 42.0
PRCOL_00001368 Prasinoderma coloniale HOM05D001734 ORTHO05D003483 5.8e-14 84.3 752 22.2
CBR_g6357 Chara braunii HOM05D001734 ORTHO05D006943 1.3e-13 83.2 443 25.5
arahy.Tifrunner.gnm1.ann1.VRLT2G Arachis hypogaea HOM05D000411 ORTHO05D003483 4.9e-13 81.3 86 40.7
SMO203G0188 Selaginella moellendorffii HOM05D001734 ORTHO05D006943 1.1e-12 80.1 418 23.9
Medtr3g110870 Medicago truncatula HOM05D001734 ORTHO05D003483 7.1e-12 77.4 115 39.1
Mapoly0026s0077 Marchantia polymorpha HOM05D001734 ORTHO05D006943 2.1e-11 75.9 496 23.0
MBI10_g06737_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D003483 4.6e-11 74.7 270 27.4
TPR.G494 Trifolium pratense HOM05D001734 ORTHO05D003483 1.3e-10 73.2 59 52.5
Lsat_1_v5_gn_9_85140 Lactuca sativa HOM05D001734 ORTHO05D003483 2.3e-10 72.4 102 39.2
MBI10_g06739_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D003483 9.6e-09 67.0 59 47.5
SGA_v2.0_scaffold990G53774 Striga asiatica HOM05D001734 ORTHO05D003483 9.6e-09 67.0 76 43.4
PRCOL_00000373 Prasinoderma coloniale HOM05D003735 ORTHO05D006943 1.8e-07 62.8 500 23.0
Medtr7g026890 Medicago truncatula HOM05D001734 ORTHO05D003483 4.4e-06 58.2 115 36.5


User provided reference genes

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