Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g21043 Chara braunii HOM05D005778 ORTHO05D007245 0.0e+00 1828.1 1022 100.0
Pp3c5_3310 Physcomitrium patens HOM05D005778 ORTHO05D007245 4.4e-54 217.6 392 34.9
AagrBONN_evm.TU.Sc2ySwM_228.2963 Anthoceros agrestis HOM05D005778 ORTHO05D007245 1.7e-53 215.7 390 35.6
Eucgr.I00295 Eucalyptus grandis HOM05D005778 ORTHO05D007245 1.1e-49 203.0 390 35.4
Mapoly0041s0060 Marchantia polymorpha HOM05D005778 ORTHO05D007245 7.2e-49 200.3 391 33.2
Aqoxy5G02041 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 3.6e-48 198.0 381 34.6
Atru.chr4.723 Acer truncatum HOM05D005778 ORTHO05D007245 1.4e-47 196.1 391 34.8
Sc03g0004580 Simmondsia chinensis HOM05D005778 ORTHO05D007245 3.0e-47 194.9 393 34.6
CiPaw.03G131700 Carya illinoinensis HOM05D005778 ORTHO05D007245 2.0e-46 192.2 382 34.0
Cfa002785 Carpinus fangiana HOM05D005778 ORTHO05D007245 7.5e-46 190.3 382 34.0
Rhsim10G0147200 Rhododendron simsii HOM05D005778 ORTHO05D007245 7.5e-46 190.3 391 34.0
PGR119G1966 Punica granatum HOM05D005778 ORTHO05D007245 9.7e-46 189.9 387 34.1
CDE07G0129 Ceratophyllum demersum HOM05D005778 ORTHO05D007245 1.7e-45 189.1 391 32.7
Aqoxy4G02517 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 3.7e-45 188.0 390 32.3
Cc07_g16660 Coffea canephora HOM05D005778 ORTHO05D007245 6.3e-45 187.2 383 33.9
Lsat_1_v5_gn_4_138380 Lactuca sativa HOM05D005778 ORTHO05D007245 8.2e-45 186.8 395 32.7
Ca_17674_v3 Cicer arietinum L. HOM05D005778 ORTHO05D007245 1.1e-44 186.4 380 34.5
FvH4_1g23210 Fragaria vesca HOM05D005778 ORTHO05D007245 1.4e-44 186.0 390 34.1
Medtr8g092300 Medicago truncatula HOM05D005778 ORTHO05D007245 1.4e-44 186.0 379 32.7
PSO170G4940 Papaver somniferum HOM05D005778 ORTHO05D007245 1.4e-44 186.0 382 34.3
TWI79G0191 Tripterygium wilfordii HOM05D005778 ORTHO05D007245 2.4e-44 185.3 392 32.1
Prupe.6G166800 Prunus persica HOM05D005778 ORTHO05D007245 4.1e-44 184.5 390 33.3
ClCG01G015860 Citrullus lanatus HOM05D005778 ORTHO05D007245 7.0e-44 183.7 381 33.6
Dinv16426 Davidia involucrata HOM05D005778 ORTHO05D007245 7.0e-44 183.7 386 33.4
CANSAT01G2349 Cannabis sativa HOM05D005778 ORTHO05D007245 1.2e-43 183.0 383 33.7
CsaV3_6G042140 Cucumis sativus L. HOM05D005778 ORTHO05D007245 1.2e-43 183.0 382 33.2
CSS0023800 Camellia sinensis var. sinensis HOM05D005778 ORTHO05D007245 1.6e-43 182.6 383 34.7
TPR.G2233 Trifolium pratense HOM05D005778 ORTHO05D007245 1.6e-43 182.6 381 32.0
SGA_v2.0_scaffold47G17685 Striga asiatica HOM05D005778 ORTHO05D007245 2.0e-43 182.2 387 32.3
arahy.Tifrunner.gnm1.ann1.A9RKWD Arachis hypogaea HOM05D005778 ORTHO05D007245 2.7e-43 181.8 379 32.2
Lj4g0013346 Lotus japonicus HOM05D005778 ORTHO05D007245 2.7e-43 181.8 378 32.8
arahy.Tifrunner.gnm1.ann1.2KBC6S Arachis hypogaea HOM05D005778 ORTHO05D007245 4.5e-43 181.0 379 32.2
Sopen04g022870 Solanum pennellii HOM05D005778 ORTHO05D007245 5.9e-43 180.6 382 34.3
TAR628G0341 Trochodendron aralioides HOM05D005778 ORTHO05D007245 7.7e-43 180.3 379 33.2
ATR0800G169 Amborella trichopoda HOM05D005778 ORTHO05D007245 1.7e-42 179.1 391 33.2
CAN.G860.4 Capsicum annuum HOM05D005778 ORTHO05D007245 1.7e-42 179.1 381 33.6
Migut.L00055 Erythranthe guttata HOM05D005778 ORTHO05D007245 1.7e-42 179.1 382 31.4
Psat7g049960 Pisum sativum HOM05D005778 ORTHO05D007245 1.7e-42 179.1 379 32.2
Sed0016319 Sechium edule HOM05D005778 ORTHO05D007245 1.7e-42 179.1 382 33.2
SalBow5G2484 Salvia bowleyana HOM05D005778 ORTHO05D007245 2.2e-42 178.7 382 31.9
Solyc04g051490.3 Solanum lycopersicum HOM05D005778 ORTHO05D007245 2.2e-42 178.7 380 33.9
VMungo0251G2366 Vigna mungo HOM05D005778 ORTHO05D007245 2.2e-42 178.7 379 31.9
FAN19G0143 Fragaria x ananassa HOM05D005778 ORTHO05D007245 2.9e-42 178.3 400 33.2
Actinidia31890 Actinidia chinensis HOM05D005778 ORTHO05D007245 3.8e-42 177.9 386 33.7
Nn5g28812 Nelumbo nucifera HOM05D005778 ORTHO05D007245 3.8e-42 177.9 378 32.8
Glyma.05G186200 Glycine max HOM05D005778 ORTHO05D007245 6.5e-42 177.2 378 32.5
MD15G1335700 Malus domestica HOM05D005778 ORTHO05D007245 1.5e-41 176.0 390 31.5
Os04g0648700 Oryza sativa ssp. japonica HOM05D005778 ORTHO05D007245 1.5e-41 176.0 385 32.2
Phvul.002G267400 Phaseolus vulgaris HOM05D005778 ORTHO05D007245 1.5e-41 176.0 378 31.5
Ciclev10025290m.g Citrus clementina HOM05D005778 ORTHO05D007245 1.9e-41 175.6 391 29.9
Gohir.A10G082700 Gossypium hirsutum HOM05D005778 ORTHO05D007245 9.4e-41 173.3 380 32.1
Lalb_Chr12g0203421 Lupinus albus HOM05D005778 ORTHO05D007245 9.4e-41 173.3 378 31.7
Thecc.01G117000 Theobroma cacao HOM05D005778 ORTHO05D007245 9.4e-41 173.3 381 32.0
HanXRQChr09g0254171 Helianthus annuus HOM05D005778 ORTHO05D007245 1.6e-40 172.6 388 31.7
Gohir.D10G105000 Gossypium hirsutum HOM05D005778 ORTHO05D007245 2.1e-40 172.2 380 31.8
Nitab4.5_0000184g0070 Nicotiana tabacum HOM05D005778 ORTHO05D007245 2.1e-40 172.2 382 33.0
Prupe.1G550600 Prunus persica HOM05D005778 ORTHO05D007245 2.1e-40 172.2 390 32.6
QL06p031408 Quercus lobata HOM05D005778 ORTHO05D007245 2.1e-40 172.2 416 32.5
RcHm_v2.0_Chr2g0117911 Rosa chinensis HOM05D005778 ORTHO05D007245 2.1e-40 172.2 382 33.5
GSVIVG01022267001 Vitis vinifera HOM05D005778 ORTHO05D007245 2.1e-40 172.2 379 31.9
Peaxi162Scf00025g03317 Petunia axillaris HOM05D005778 ORTHO05D007245 3.6e-40 171.4 392 33.2
DCAR_016672 Daucus carota HOM05D005778 ORTHO05D007245 4.7e-40 171.0 375 33.3
Zm00001eb068550 Zea mays HOM05D005778 ORTHO05D007245 4.7e-40 171.0 389 32.9
Manes.12G145400 Manihot esculenta HOM05D005778 ORTHO05D007245 6.1e-40 170.6 378 32.3
Carub.0004s0085 Capsella rubella HOM05D005778 ORTHO05D007245 8.0e-40 170.2 393 30.0
Potri.007G077400 Populus trichocarpa HOM05D005778 ORTHO05D007245 8.0e-40 170.2 382 32.5
Gorai.011G114700 Gossypium raimondii HOM05D005778 ORTHO05D007245 1.4e-39 169.5 380 31.6
MD15G1404100 Malus domestica HOM05D005778 ORTHO05D007245 1.8e-39 169.1 386 32.9
vmacro12878 Vaccinium macrocarpon HOM05D005778 ORTHO05D007245 1.8e-39 169.1 406 31.8
HPP92_017324 Vanilla planifolia HOM05D005778 ORTHO05D007245 1.8e-39 169.1 379 31.9
Hund19626 Selenicereus undatus HOM05D005778 ORTHO05D007245 2.3e-39 168.7 391 29.9
CARHR112840 Cardamine hirsuta HOM05D005778 ORTHO05D007245 5.2e-39 167.5 386 31.1
Sabra07G0065400 Salix brachista HOM05D005778 ORTHO05D007245 5.2e-39 167.5 379 33.0
BcaC02g08761 Brassica carinata HOM05D005778 ORTHO05D007245 2.6e-38 165.2 383 31.1
C04p50950 Brassica napus HOM05D005778 ORTHO05D007245 2.6e-38 165.2 383 31.1
THA.LOC104804137 Tarenaya hassleriana HOM05D005778 ORTHO05D007245 2.6e-38 165.2 382 30.9
ECA238G1732 Erigeron canadensis HOM05D005778 ORTHO05D007245 4.4e-38 164.5 267 39.0
FAN23G1488 Fragaria x ananassa HOM05D005778 ORTHO05D007245 5.7e-38 164.1 367 33.5
RcHm_v2.0_Chr7g0226611 Rosa chinensis HOM05D005778 ORTHO05D007245 1.7e-37 162.5 391 30.9
BolC7t42688H Brassica oleracea HOM05D005778 ORTHO05D007245 2.2e-37 162.2 390 30.3
MSTRG.15762 Avicennia marina HOM05D005778 ORTHO05D007245 2.8e-37 161.8 256 37.1
CARHR113310 Cardamine hirsuta HOM05D005778 ORTHO05D007245 2.8e-37 161.8 378 30.4
BolC4t26687H Brassica oleracea HOM05D005778 ORTHO05D007245 6.3e-37 160.6 385 30.4
Lj4C861G1 Lonicera japonica HOM05D005778 ORTHO05D007245 6.3e-37 160.6 445 29.2
Thhalv10000104m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 8.3e-37 160.2 378 29.9
BraA04t17279Z Brassica rapa HOM05D005778 ORTHO05D007245 7.0e-36 157.1 372 30.4
Carub.0004s0131 Capsella rubella HOM05D005778 ORTHO05D007245 9.1e-36 156.8 379 30.3
Sp4g01220 Schrenkiella parvula HOM05D005778 ORTHO05D007245 9.1e-36 156.8 378 29.6
BcaB08g35041 Brassica carinata HOM05D005778 ORTHO05D007245 1.2e-35 156.4 378 30.4
A04p16440 Brassica napus HOM05D005778 ORTHO05D007245 2.0e-35 155.6 372 30.1
AL4G11110 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 3.5e-35 154.8 375 29.1
AT2G22140 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 3.5e-35 154.8 379 30.1
SMO352G0072 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 5.9e-35 154.1 331 31.1
BcaB06g27789 Brassica carinata HOM05D005778 ORTHO05D007245 1.0e-34 153.3 371 30.5
AT2G21800 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 1.3e-34 152.9 378 29.6
unitig_37.g12529 Utricularia gibba HOM05D005778 ORTHO05D007245 3.8e-34 151.4 385 29.9
Aa31LG7G14570 Aethionema arabicum HOM05D005778 ORTHO05D007245 6.5e-34 150.6 396 29.3
BraA09t41166Z Brassica rapa HOM05D005778 ORTHO05D007245 8.5e-34 150.2 378 29.6
AL4G11490 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 1.5e-33 149.4 378 29.4
BcaC07g41093 Brassica carinata HOM05D005778 ORTHO05D007245 1.5e-33 149.4 378 28.6
A09p57740 Brassica napus HOM05D005778 ORTHO05D007245 1.5e-33 149.4 377 30.0
BolC8t51659H Brassica oleracea HOM05D005778 ORTHO05D007245 1.5e-33 149.4 378 28.6
C08p40960 Brassica napus HOM05D005778 ORTHO05D007245 2.1e-32 145.6 378 28.0
Thhalv10000122m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 8.0e-32 143.7 370 28.9
AUR62003644 Chenopodium quinoa HOM05D005778 ORTHO05D007245 7.5e-30 137.1 255 32.5
FvH4_5g31350 Fragaria vesca HOM05D005778 ORTHO05D007245 6.3e-29 134.0 333 31.2
Haze_25082 Corylus avellana HOM05D005778 ORTHO05D007245 1.8e-28 132.5 462 27.5
EL10Ac6g15224 Beta vulgaris HOM05D005778 ORTHO05D007245 5.4e-28 131.0 381 27.0
Sp4g00940 Schrenkiella parvula HOM05D005778 ORTHO05D007245 9.2e-28 130.2 362 28.2
Hund03512 Selenicereus undatus HOM05D005778 ORTHO05D007245 9.2e-28 130.2 393 28.8
Oeu001980.1 Olea europaea HOM05D005778 ORTHO05D007245 4.7e-24 117.9 427 23.7
FAN28G2237 Fragaria x ananassa HOM05D005778 ORTHO05D007245 8.0e-24 117.1 272 32.7
MELO3C007452.2 Cucumis melo HOM05D005778 ORTHO05D007245 8.9e-23 113.6 412 26.9
COL.COLO4_03471 Corchorus olitorius HOM05D005778 ORTHO05D007245 2.0e-19 102.4 150 39.3
Nitab4.5_0011929g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 2.5e-17 95.5 262 29.8
Nitab4.5_0021115g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 2.1e-16 92.4 250 30.0
Cpa.g.sc72.54 Carica papaya HOM05D005778 ORTHO05D007245 4.7e-16 91.3 136 37.5
SEGI_24036 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 4.7e-16 91.3 100 49.0
FAN26G2893 Fragaria x ananassa HOM05D005778 ORTHO05D007245 5.2e-15 87.8 324 26.5
Glyma.08G144700 Glycine max HOM05D005778 ORTHO05D007245 5.2e-15 87.8 249 27.7
SMO288G0013 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 4.4e-14 84.7 331 26.0
Cpa.g.sc72.53 Carica papaya HOM05D005778 ORTHO05D007245 9.2e-12 77.0 245 25.3
FAN18G1125 Fragaria x ananassa HOM05D005778 ORTHO05D007245 3.4e-06 58.5 67 43.3


User provided reference genes

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