Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 0.0e+00 1365.5 966 100.0
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 4.9e-31 141.0 142 52.1
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 9.2e-30 136.7 114 58.8
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 2.7e-29 135.2 150 46.7
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 2.7e-29 135.2 122 53.3
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 2.7e-29 135.2 114 54.4
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 6.0e-29 134.0 117 53.8
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 7.8e-29 133.7 114 55.3
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 7.8e-29 133.7 114 56.1
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 7.8e-29 133.7 114 53.5
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 7.8e-29 133.7 207 40.6
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 1.3e-28 132.9 181 44.8
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 1.7e-28 132.5 360 33.3
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 1.7e-28 132.5 110 56.4
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 2.3e-28 132.1 123 52.8
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 2.3e-28 132.1 110 55.5
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 2.3e-28 132.1 114 54.4
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 2.3e-28 132.1 110 54.5
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 2.3e-28 132.1 110 55.5
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 3.0e-28 131.7 165 44.2
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 3.0e-28 131.7 220 38.6
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 3.0e-28 131.7 219 37.4
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 3.9e-28 131.3 160 46.2
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 3.9e-28 131.3 165 44.2
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 3.9e-28 131.3 110 55.5
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 5.1e-28 131.0 126 52.4
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 5.1e-28 131.0 126 52.4
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 5.1e-28 131.0 165 44.2
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 6.6e-28 130.6 122 50.0
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 8.7e-28 130.2 110 56.4
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 8.7e-28 130.2 110 55.5
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 1.1e-27 129.8 149 46.3
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 1.1e-27 129.8 155 44.5
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 1.5e-27 129.4 168 43.5
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 1.5e-27 129.4 196 40.8
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 1.5e-27 129.4 166 42.8
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 1.5e-27 129.4 207 38.6
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 1.5e-27 129.4 137 48.2
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 1.9e-27 129.0 114 52.6
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 1.9e-27 129.0 122 49.2
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 1.9e-27 129.0 122 49.2
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 1.9e-27 129.0 143 44.8
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 1.9e-27 129.0 123 50.4
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 2.5e-27 128.6 110 53.6
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 2.5e-27 128.6 155 44.5
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 2.5e-27 128.6 110 52.7
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 3.3e-27 128.3 168 42.9
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 3.3e-27 128.3 206 41.3
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 3.3e-27 128.3 172 42.4
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 3.3e-27 128.3 184 44.0
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 3.3e-27 128.3 161 42.9
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 4.3e-27 127.9 110 54.5
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 4.3e-27 127.9 173 40.5
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 4.3e-27 127.9 152 44.1
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 4.3e-27 127.9 165 44.2
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 4.3e-27 127.9 153 42.5
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 4.3e-27 127.9 110 57.3
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 4.3e-27 127.9 168 44.0
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 5.6e-27 127.5 110 56.4
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 5.6e-27 127.5 162 44.4
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 7.3e-27 127.1 110 53.6
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 7.3e-27 127.1 152 42.8
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 7.3e-27 127.1 110 53.6
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 7.3e-27 127.1 144 45.8
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 7.3e-27 127.1 199 37.2
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 9.6e-27 126.7 188 38.3
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 9.6e-27 126.7 212 37.7
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 9.6e-27 126.7 132 49.2
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 1.2e-26 126.3 110 53.6
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 1.2e-26 126.3 110 53.6
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 1.2e-26 126.3 132 49.2
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 1.6e-26 125.9 110 52.7
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 1.6e-26 125.9 156 43.6
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 1.6e-26 125.9 117 53.8
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 2.1e-26 125.6 161 45.3
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 2.1e-26 125.6 110 54.5
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 2.1e-26 125.6 219 34.2
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 6.2e-26 124.0 172 43.6
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 6.2e-26 124.0 208 38.9
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 6.2e-26 124.0 135 46.7
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 8.1e-26 123.6 132 48.5
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 8.1e-26 123.6 167 41.3
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 8.1e-26 123.6 167 41.3
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 1.1e-25 123.2 167 44.3
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 1.8e-25 122.5 195 37.4
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 1.8e-25 122.5 195 37.4
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 1.8e-25 122.5 166 42.8
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 3.1e-25 121.7 171 42.7
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 3.1e-25 121.7 118 51.7
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 4.0e-25 121.3 201 36.3
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 9.0e-25 120.2 222 32.9
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 1.2e-24 119.8 136 42.6
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 2.6e-24 118.6 168 41.7
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 3.4e-24 118.2 231 34.6
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 3.4e-24 118.2 181 40.3
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 4.4e-24 117.9 204 36.8
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 5.8e-24 117.5 169 39.6
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 9.9e-24 116.7 186 37.6
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 3.8e-23 114.8 230 35.2
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 6.4e-23 114.0 137 45.3
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 1.1e-22 113.2 299 30.8
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 2.4e-22 112.1 220 34.1
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 5.4e-22 110.9 137 46.0
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 2.1e-21 109.0 187 38.5
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 4.6e-21 107.8 299 31.4
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 3.8e-15 88.2 120 40.0
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 4.9e-15 87.8 154 35.1
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 2.7e-13 82.0 80 48.8
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 1.3e-12 79.7 173 32.9
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 1.8e-12 79.3 80 48.8
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 2.5e-06 58.9 120 35.0


User provided reference genes

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