Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR252880 Cardamine hirsuta HOM05D006172 ORTHO05D005515 1.0e-134 483.4 248 100.0
Carub.0006s3250 Capsella rubella HOM05D006172 ORTHO05D005515 2.4e-123 445.7 247 91.5
AL6G48130 Arabidopsis lyrata HOM05D006172 ORTHO05D005515 9.1e-123 443.7 247 91.5
AT4G04670 Arabidopsis thaliana HOM05D006172 ORTHO05D005515 2.2e-121 439.1 247 90.7
Sp6g04230 Schrenkiella parvula HOM05D006172 ORTHO05D005515 8.5e-121 437.2 247 89.9
Thhalv10028391m.g Eutrema salsugineum HOM05D006172 ORTHO05D005515 1.4e-120 436.4 247 90.3
Aa31LG9G9740 Aethionema arabicum HOM05D006172 ORTHO05D005515 2.4e-107 392.5 258 79.5
C03p36400 Brassica napus HOM05D006172 ORTHO05D005515 1.6e-103 379.8 251 80.5
BolC3t15953H Brassica oleracea HOM05D006172 ORTHO05D005515 1.6e-103 379.8 251 80.5
BraA03t12201Z Brassica rapa HOM05D006172 ORTHO05D005515 5.2e-102 374.8 250 80.4
A03p30170 Brassica napus HOM05D006172 ORTHO05D005515 7.5e-101 370.9 250 80.0
BcaB01g02576 Brassica carinata HOM05D006172 ORTHO05D005515 8.3e-100 367.5 250 79.6
THA.LOC104813121 Tarenaya hassleriana HOM05D006172 ORTHO05D005515 4.5e-98 361.7 260 73.8
Cpa.g.sc152.15 Carica papaya HOM05D006172 ORTHO05D005515 2.3e-78 296.2 219 72.6
CANSAT56G2229 Cannabis sativa HOM05D006172 ORTHO05D005515 1.7e-76 290.0 244 64.8
Nitab4.5_0000096g0040 Nicotiana tabacum HOM05D006172 ORTHO05D005515 6.0e-74 281.6 227 64.8
Haze_06799 Corylus avellana HOM05D006172 ORTHO05D005515 2.3e-73 279.6 222 67.1
Nitab4.5_0006322g0020 Nicotiana tabacum HOM05D006172 ORTHO05D005515 5.1e-73 278.5 227 64.3
TAR626G1786 Trochodendron aralioides HOM05D006172 ORTHO05D005515 5.1e-73 278.5 212 68.9
Peaxi162Scf00627g00035 Petunia axillaris HOM05D006172 ORTHO05D005515 8.6e-73 277.7 249 59.4
PSO675G8381 Papaver somniferum HOM05D006172 ORTHO05D005515 1.1e-72 277.3 251 61.0
COL.COLO4_31773 Corchorus olitorius HOM05D006172 ORTHO05D005515 1.9e-72 276.6 206 69.9
Solyc05g055610.4 Solanum lycopersicum HOM05D006172 ORTHO05D005515 1.9e-72 276.6 248 60.1
Sopen05g034060 Solanum pennellii HOM05D006172 ORTHO05D005515 3.3e-72 275.8 248 60.1
Cc09_g01690 Coffea canephora HOM05D006172 ORTHO05D005515 2.8e-71 272.7 221 66.1
arahy.Tifrunner.gnm1.ann1.3R4FRS Arachis hypogaea HOM05D006172 ORTHO05D005515 3.6e-71 272.3 256 60.9
Gohir.D05G173300 Gossypium hirsutum HOM05D006172 ORTHO05D005515 1.1e-70 270.8 249 59.8
Gorai.009G178500 Gossypium raimondii HOM05D006172 ORTHO05D005515 1.1e-70 270.8 249 59.8
Medtr4g132120 Medicago truncatula HOM05D006172 ORTHO05D005515 3.1e-70 269.2 249 60.6
arahy.Tifrunner.gnm1.ann1.GS5NL2 Arachis hypogaea HOM05D006172 ORTHO05D005515 5.2e-70 268.5 256 60.5
Duzib192G0085 Durio zibethinus HOM05D006172 ORTHO05D005515 6.8e-70 268.1 249 60.6
Potri.004G015200 Populus trichocarpa HOM05D006172 ORTHO05D005515 6.8e-70 268.1 267 58.4
MD10G1321300 Malus domestica HOM05D006172 ORTHO05D005515 8.9e-70 267.7 214 65.0
Psat4g006680 Pisum sativum HOM05D006172 ORTHO05D005515 8.9e-70 267.7 213 64.8
Migut.M01317 Erythranthe guttata HOM05D006172 ORTHO05D005515 2.0e-69 266.5 215 64.2
Glyma.07G260400 Glycine max HOM05D006172 ORTHO05D005515 2.0e-69 266.5 236 64.0
QL05p073195 Quercus lobata HOM05D006172 ORTHO05D005515 2.6e-69 266.2 217 65.0
Ca_21083_v3 Cicer arietinum L. HOM05D006172 ORTHO05D005515 7.5e-69 264.6 213 64.8
Gohir.A05G170200 Gossypium hirsutum HOM05D006172 ORTHO05D005515 1.7e-68 263.5 245 59.6
Lj1A1230T62 Lonicera japonica HOM05D006172 ORTHO05D005515 1.7e-68 263.5 220 64.1
RcHm_v2.0_Chr5g0003171 Rosa chinensis HOM05D006172 ORTHO05D005515 4.9e-68 261.9 234 61.5
Lj4g0023330 Lotus japonicus HOM05D006172 ORTHO05D005515 6.4e-68 261.5 216 65.7
PGR042G0524 Punica granatum HOM05D006172 ORTHO05D005515 8.3e-68 261.2 250 56.8
Sabra04G0007400 Salix brachista HOM05D006172 ORTHO05D005515 8.3e-68 261.2 271 56.5
ClCG01G022000 Citrullus lanatus HOM05D006172 ORTHO05D005515 2.4e-67 259.6 214 65.9
FvH4_3g02080 Fragaria vesca HOM05D006172 ORTHO05D005515 2.4e-67 259.6 219 62.6
Sc05g0009930 Simmondsia chinensis HOM05D006172 ORTHO05D005515 2.4e-67 259.6 226 61.1
MELO3C007389.2 Cucumis melo HOM05D006172 ORTHO05D005515 9.2e-67 257.7 214 65.0
FAN21G3941 Fragaria x ananassa HOM05D006172 ORTHO05D005515 1.6e-66 256.9 215 62.8
HanXRQChr05g0129541 Helianthus annuus HOM05D006172 ORTHO05D005515 7.8e-66 254.6 231 60.2
HanXRQChr05g0129551 Helianthus annuus HOM05D006172 ORTHO05D005515 7.8e-66 254.6 231 60.2
Lalb_Chr13g0304211 Lupinus albus HOM05D006172 ORTHO05D005515 7.8e-66 254.6 250 57.2
Sed0002789 Sechium edule HOM05D006172 ORTHO05D005515 7.8e-66 254.6 216 64.4
Rhsim13G0154200 Rhododendron simsii HOM05D006172 ORTHO05D005515 1.0e-65 254.2 247 57.1
SGA_v2.0_scaffold4G01916 Striga asiatica HOM05D006172 ORTHO05D005515 1.0e-65 254.2 250 58.4
VMungo1215G3219 Vigna mungo HOM05D006172 ORTHO05D005515 1.0e-65 254.2 251 60.2
FAN25G0496 Fragaria x ananassa HOM05D006172 ORTHO05D005515 1.3e-65 253.8 218 62.4
vmacro03686 Vaccinium macrocarpon HOM05D006172 ORTHO05D005515 2.3e-65 253.1 214 64.0
Sc05g0009220 Simmondsia chinensis HOM05D006172 ORTHO05D005515 3.0e-65 252.7 226 60.6
Ah.09g234910 Amaranthus hybridus HOM05D006172 ORTHO05D005515 3.9e-65 252.3 219 61.2
TWI38G1682 Tripterygium wilfordii HOM05D006172 ORTHO05D005515 3.9e-65 252.3 248 57.3
CSS0050420 Camellia sinensis var. sinensis HOM05D006172 ORTHO05D005515 6.6e-65 251.5 225 59.6
Hund21409 Selenicereus undatus HOM05D006172 ORTHO05D005515 6.6e-65 251.5 213 62.9
Aqoxy1G02151 Aquilegia oxysepala HOM05D006172 ORTHO05D005515 1.1e-64 250.8 220 62.7
CSS0038964 Camellia sinensis var. sinensis HOM05D006172 ORTHO05D005515 1.1e-64 250.8 225 59.6
Lsat_1_v5_gn_7_15980 Lactuca sativa HOM05D006172 ORTHO05D005515 1.1e-64 250.8 247 58.7
Oeu013635.1 Olea europaea HOM05D006172 ORTHO05D005515 1.1e-64 250.8 254 57.5
Oeu013636.1 Olea europaea HOM05D006172 ORTHO05D005515 1.5e-64 250.4 267 55.4
GSVIVG01012726001 Vitis vinifera HOM05D006172 ORTHO05D005515 1.9e-64 250.0 213 61.5
Nn1g07129 Nelumbo nucifera HOM05D006172 ORTHO05D005515 2.5e-64 249.6 205 63.9
SHI02199 Sapria himalayana HOM05D006172 ORTHO05D005515 2.5e-64 249.6 209 62.2
Atru.chr10.2219 Acer truncatum HOM05D006172 ORTHO05D005515 7.3e-64 248.1 243 55.1
ECA236G0092 Erigeron canadensis HOM05D006172 ORTHO05D005515 1.2e-63 247.3 245 58.4
Actinidia28669 Actinidia chinensis HOM05D006172 ORTHO05D005515 3.6e-63 245.7 223 61.0
AUR62021945 Chenopodium quinoa HOM05D006172 ORTHO05D005515 4.7e-63 245.4 237 57.4
DCAR_028182 Daucus carota HOM05D006172 ORTHO05D005515 4.7e-63 245.4 216 61.6
CAN.G694.35 Capsicum annuum HOM05D006172 ORTHO05D005515 6.2e-63 245.0 226 58.8
Atru.chr10.2224 Acer truncatum HOM05D006172 ORTHO05D005515 8.1e-63 244.6 242 55.4
EL10Ac8g20057 Beta vulgaris HOM05D006172 ORTHO05D005515 1.8e-62 243.4 228 58.3
CAN.G694.33 Capsicum annuum HOM05D006172 ORTHO05D005515 4.0e-62 242.3 243 56.0
Eucgr.E04055 Eucalyptus grandis HOM05D006172 ORTHO05D005515 9.9e-61 237.7 204 62.3
Ciclev10018338m.g Citrus clementina HOM05D006172 ORTHO05D005515 4.9e-60 235.3 224 54.9
AUR62012709 Chenopodium quinoa HOM05D006172 ORTHO05D005515 1.9e-59 233.4 211 60.2
ATR0794G123 Amborella trichopoda HOM05D006172 ORTHO05D005515 6.9e-54 214.9 246 49.6
SEGI_01208 Sequoiadendron giganteum HOM05D006172 ORTHO05D005515 3.9e-49 199.1 250 45.2
QL03p014007 Quercus lobata HOM05D001565 ORTHO05D005515 2.9e-44 183.0 163 58.3
AagrBONN_evm.TU.Sc2ySwM_362.1355 Anthoceros agrestis HOM05D006172 ORTHO05D005515 8.4e-44 181.4 228 44.7
Mapoly0137s0034 Marchantia polymorpha HOM05D006172 ORTHO05D005515 2.4e-43 179.9 216 45.8
Pp3c9_15020 Physcomitrium patens HOM05D006172 ORTHO05D005515 3.5e-42 176.0 214 45.3
SMO139G0125 Selaginella moellendorffii HOM05D006172 ORTHO05D005515 6.0e-42 175.3 243 41.6
HPP92_012400 Vanilla planifolia HOM05D006172 ORTHO05D005515 4.8e-39 165.6 215 46.5
CDE11G0148 Ceratophyllum demersum HOM05D006172 ORTHO05D005515 1.5e-37 160.6 244 43.9
CBR_g49836 Chara braunii HOM05D006172 ORTHO05D004693 1.3e-36 157.5 185 44.9
MCO05G475 Micromonas commoda HOM05D006172 ORTHO05D005515 3.8e-36 156.0 203 41.4
Cre14.g626634 Chlamydomonas reinhardtii HOM05D006172 ORTHO05D005515 4.9e-36 155.6 206 39.3
PRCOL_00000475 Prasinoderma coloniale HOM05D006172 ORTHO05D005515 3.1e-30 136.3 192 39.1
HPP92_012316 Vanilla planifolia HOM05D006172 ORTHO05D005515 1.6e-26 124.0 204 40.2
unitig_37.g12155 Utricularia gibba HOM05D006172 ORTHO05D005515 4.6e-26 122.5 128 51.6
unitig_37.g12154 Utricularia gibba HOM05D006172 ORTHO05D005515 6.1e-18 95.5 78 66.7
Cfa027274 Carpinus fangiana HOM05D006172 ORTHO05D005515 3.9e-17 92.8 241 31.1
Zm00001eb322630 Zea mays HOM05D006172 ORTHO05D005515 4.7e-10 69.3 81 46.9


User provided reference genes

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