Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 9.2e-170 600.1 300 100.0
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 2.4e-154 548.9 302 91.7
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 1.4e-149 533.1 302 88.7
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 3.1e-149 531.9 304 89.1
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 4.0e-149 531.6 304 88.5
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 1.5e-148 529.6 302 89.1
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 2.0e-148 529.3 303 88.1
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 1.4e-146 523.1 304 87.5
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 2.4e-146 522.3 305 86.6
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 4.1e-146 521.5 302 87.4
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 5.4e-146 521.2 303 86.5
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 5.4e-146 521.2 302 87.4
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 9.2e-146 520.4 302 87.1
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 3.5e-145 518.5 302 87.1
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 3.3e-143 511.9 300 86.7
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 3.3e-143 511.9 298 84.9
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 4.3e-143 511.5 300 86.3
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 1.2e-142 510.0 300 85.7
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 3.1e-141 505.4 297 85.9
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 2.6e-140 502.3 296 85.5
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 6.2e-134 481.1 300 80.3
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 1.2e-129 466.8 300 77.0
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 2.1e-129 466.1 301 77.7
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 6.0e-129 464.5 302 77.5
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 1.0e-128 463.8 300 77.0
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 1.3e-128 463.4 301 76.7
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 1.7e-128 463.0 300 76.7
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 4.3e-127 458.4 302 76.2
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 5.6e-127 458.0 301 76.4
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 6.2e-126 454.5 302 75.8
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 5.3e-125 451.4 301 76.1
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 2.6e-124 449.1 301 76.4
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 1.4e-122 443.4 301 74.1
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 2.4e-122 442.6 301 75.4
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 1.6e-121 439.9 302 74.8
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 3.5e-121 438.7 294 75.5
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 2.3e-120 436.0 298 73.5
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 1.5e-119 433.3 301 72.8
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 4.3e-119 431.8 293 73.7
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 7.4e-119 431.0 304 72.4
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 1.6e-118 429.9 315 70.5
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 3.7e-118 428.7 296 70.3
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 3.7e-118 428.7 304 72.4
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 4.8e-118 428.3 303 71.9
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 6.2e-118 427.9 304 71.7
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 5.3e-117 424.9 303 71.9
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 5.8e-116 421.4 276 76.1
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 1.7e-115 419.9 305 70.2
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 1.7e-115 419.9 336 65.8
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 2.2e-115 419.5 294 69.7
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 3.8e-115 418.7 298 71.5
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 8.4e-115 417.5 304 71.1
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 1.4e-114 416.8 302 71.2
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 3.2e-114 415.6 297 68.4
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 3.2e-114 415.6 297 68.7
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 9.3e-114 414.1 299 70.9
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 9.3e-114 414.1 299 71.2
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 1.2e-113 413.7 297 68.7
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.1e-113 412.9 303 70.3
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 2.7e-113 412.5 298 68.8
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 3.5e-113 412.1 299 69.9
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 7.9e-113 411.0 313 68.4
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 7.9e-113 411.0 299 69.6
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 1.8e-112 409.8 261 80.1
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 3.0e-112 409.1 290 70.7
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 6.7e-112 407.9 301 68.8
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.1e-111 407.1 299 69.2
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 1.1e-111 407.1 299 68.9
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 2.5e-111 406.0 295 67.1
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 3.3e-111 405.6 290 70.3
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.3e-110 403.7 319 66.8
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 3.7e-110 402.1 302 69.2
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.1e-109 400.6 321 65.4
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 2.4e-109 399.4 287 69.7
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.4e-109 399.4 319 65.8
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 5.3e-109 398.3 268 73.1
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 6.9e-109 397.9 281 71.9
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 9.0e-109 397.5 300 68.7
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 2.0e-108 396.4 282 70.9
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 7.9e-105 384.4 285 69.5
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 3.9e-104 382.1 298 66.4
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 2.5e-103 379.4 290 63.8
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 1.3e-102 377.1 291 64.9
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 5.0e-99 365.2 297 61.6
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 1.4e-98 363.6 243 74.9
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 5.5e-98 361.7 327 61.5
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 7.2e-98 361.3 278 64.7
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 1.5e-95 353.6 223 81.2
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 2.5e-95 352.8 215 80.0
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.8e-93 346.7 250 71.2
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 4.5e-92 342.0 308 61.4
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 2.2e-91 339.7 248 71.4
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 3.8e-91 339.0 243 73.7
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 6.5e-91 338.2 248 71.4
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 2.8e-86 322.8 214 74.8
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 1.1e-85 320.9 309 53.4
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 6.5e-83 311.6 245 66.9
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 3.2e-82 309.3 300 52.7
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 6.1e-81 305.1 275 60.7
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 6.3e-78 295.0 217 70.0
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.5e-74 283.9 250 61.6
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 3.6e-73 279.3 290 54.8
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 1.1e-69 267.7 216 66.7
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.1e-69 266.2 438 42.0
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.6e-68 263.8 240 60.8
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 2.0e-68 263.5 315 45.1
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 3.2e-66 256.1 149 79.2
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 2.0e-63 246.9 255 56.9
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 2.8e-62 243.0 222 59.9
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 5.9e-60 235.3 180 68.9
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 6.1e-57 225.3 185 61.6
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 4.4e-55 219.2 234 55.6
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 6.4e-54 215.3 179 64.8
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 8.3e-54 214.9 209 58.9
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 6.8e-48 195.3 135 71.1
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 6.8e-48 195.3 125 72.0
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 2.6e-47 193.4 111 75.7
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 7.5e-47 191.8 164 62.8
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 4.0e-40 169.5 95 84.2
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 9.2e-37 158.3 277 37.2
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 2.1e-36 157.1 96 75.0
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 1.2e-33 147.9 86 79.1
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 8.9e-32 141.7 137 59.1
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 1.4e-29 134.4 156 50.0
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 7.1e-29 132.1 246 33.7
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 2.7e-28 130.2 337 30.0
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 6.0e-28 129.0 70 85.7
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 1.4e-24 117.9 159 43.4
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 1.5e-23 114.4 141 39.0
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 4.3e-18 96.3 105 54.3
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 2.4e-16 90.5 95 55.8
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 6.7e-11 72.4 91 49.5
TPR.G32 Trifolium pratense HOM05D005614 ORTHO05D006759 6.7e-11 72.4 31 90.3
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 9.6e-10 68.6 87 49.4
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 3.1e-08 63.5 93 41.9


User provided reference genes

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