Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR040520 Cardamine hirsuta HOM05D003391 ORTHO05D005563 5.1e-91 337.8 179 100.0
BolC3t21285H Brassica oleracea HOM05D003391 ORTHO05D005563 1.9e-77 292.7 162 95.7
AL1G58160 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 3.5e-76 288.5 166 91.6
AT1G50500 Arabidopsis thaliana HOM05D003391 ORTHO05D005563 3.5e-76 288.5 166 91.6
C03p89680 Brassica napus HOM05D003391 ORTHO05D005563 3.5e-76 288.5 166 92.2
BcaC01g01234 Brassica carinata HOM05D003391 ORTHO05D005563 1.0e-75 287.0 166 92.2
Carub.0001s3957 Capsella rubella HOM05D003391 ORTHO05D005563 1.7e-75 286.2 166 90.4
Sp1g37350 Schrenkiella parvula HOM05D003391 ORTHO05D005563 1.5e-74 283.1 164 89.6
BcaB02g11154 Brassica carinata HOM05D003391 ORTHO05D005563 1.9e-74 282.7 166 91.0
BcaC05g27411 Brassica carinata HOM05D003391 ORTHO05D005563 5.6e-74 281.2 166 90.4
A05p20100 Brassica napus HOM05D003391 ORTHO05D005563 5.6e-74 281.2 166 90.4
C05p33590 Brassica napus HOM05D003391 ORTHO05D005563 5.6e-74 281.2 166 90.4
BraA05t20918Z Brassica rapa HOM05D003391 ORTHO05D005563 5.6e-74 281.2 166 90.4
BolC5t32086H Brassica oleracea HOM05D003391 ORTHO05D005563 6.2e-73 277.7 166 89.8
Aa31LG10G3790 Aethionema arabicum HOM05D003391 ORTHO05D005563 6.9e-72 274.2 161 88.8
Thhalv10012404m.g Eutrema salsugineum HOM05D003391 ORTHO05D005563 9.6e-66 253.8 142 92.3
PGR042G2316 Punica granatum HOM05D003391 ORTHO05D005563 1.2e-60 236.9 160 78.8
FAN05G0705 Fragaria x ananassa HOM05D003391 ORTHO05D005563 3.5e-60 235.3 157 80.9
Sabra16G0023000 Salix brachista HOM05D003391 ORTHO05D005563 7.9e-60 234.2 166 76.5
Sabra16G0029200 Salix brachista HOM05D003391 ORTHO05D005563 7.9e-60 234.2 166 76.5
THA.LOC104809239 Tarenaya hassleriana HOM05D003391 ORTHO05D005563 7.9e-60 234.2 166 77.1
FvH4_6g40130 Fragaria vesca HOM05D003391 ORTHO05D005563 1.0e-59 233.8 157 80.3
FAN02G4219 Fragaria x ananassa HOM05D003391 ORTHO05D005563 1.0e-59 233.8 157 80.3
MELO3C026391.2 Cucumis melo HOM05D003391 ORTHO05D005563 1.8e-59 233.0 157 80.3
CsaV3_4G032190 Cucumis sativus L. HOM05D003391 ORTHO05D005563 1.8e-59 233.0 157 80.3
FAN09G1714 Fragaria x ananassa HOM05D003391 ORTHO05D005563 3.9e-59 231.9 159 79.2
Sed0012933 Sechium edule HOM05D003391 ORTHO05D005563 5.1e-59 231.5 157 80.3
TWI74G0249 Tripterygium wilfordii HOM05D003391 ORTHO05D005563 6.7e-59 231.1 157 77.7
RcHm_v2.0_Chr2g0154761 Rosa chinensis HOM05D003391 ORTHO05D005563 8.7e-59 230.7 157 78.3
MD17G1124000 Malus domestica HOM05D003391 ORTHO05D005563 1.5e-58 229.9 157 77.7
Potri.016G023000 Populus trichocarpa HOM05D003391 ORTHO05D005563 1.5e-58 229.9 157 78.3
Manes.01G037700 Manihot esculenta HOM05D003391 ORTHO05D005563 3.3e-58 228.8 166 75.3
CANSAT64G0651 Cannabis sativa HOM05D003391 ORTHO05D005563 4.3e-58 228.4 167 74.9
ClCG11G016680 Citrullus lanatus HOM05D003391 ORTHO05D005563 9.6e-58 227.3 157 79.0
Duzib068G0467 Durio zibethinus HOM05D003391 ORTHO05D005563 9.6e-58 227.3 170 75.9
Lj6g0008612 Lotus japonicus HOM05D003391 ORTHO05D005563 1.3e-57 226.9 164 76.8
QL04p065456 Quercus lobata HOM05D003391 ORTHO05D005563 1.6e-57 226.5 167 75.4
TPR.G10474 Trifolium pratense HOM05D003391 ORTHO05D005563 2.8e-57 225.7 164 75.0
Gohir.D08G181000 Gossypium hirsutum HOM05D003391 ORTHO05D005563 3.7e-57 225.3 168 75.6
Gorai.004G190000 Gossypium raimondii HOM05D003391 ORTHO05D005563 3.7e-57 225.3 168 75.6
Medtr2g028270 Medicago truncatula HOM05D003391 ORTHO05D005563 3.7e-57 225.3 164 73.8
Prupe.3G191700 Prunus persica HOM05D003391 ORTHO05D005563 4.8e-57 224.9 158 78.5
Ciclev10028552m.g Citrus clementina HOM05D003391 ORTHO05D005563 1.1e-56 223.8 157 75.2
Gohir.A08G160766 Gossypium hirsutum HOM05D003391 ORTHO05D005563 1.1e-56 223.8 168 75.0
MD09G1135000 Malus domestica HOM05D003391 ORTHO05D005563 1.1e-56 223.8 158 78.5
CiPaw.10G102000 Carya illinoinensis HOM05D003391 ORTHO05D005563 1.4e-56 223.4 156 75.6
Atru.chr13.1440 Acer truncatum HOM05D003391 ORTHO05D005563 1.8e-56 223.0 158 77.8
Atru.chr13.1465 Acer truncatum HOM05D003391 ORTHO05D005563 1.8e-56 223.0 158 77.8
Eucgr.L01917 Eucalyptus grandis HOM05D003391 ORTHO05D005563 1.8e-56 223.0 157 78.3
Thecc.03G235800 Theobroma cacao HOM05D003391 ORTHO05D005563 1.8e-56 223.0 170 74.1
Ca_11369_v3 Cicer arietinum L. HOM05D003391 ORTHO05D005563 2.4e-56 222.6 164 74.4
Ca_30786_v3 Cicer arietinum L. HOM05D003391 ORTHO05D005563 2.4e-56 222.6 164 74.4
VMungo0540G0836 Vigna mungo HOM05D003391 ORTHO05D005563 5.3e-56 221.5 156 78.2
FAN14G1902 Fragaria x ananassa HOM05D003391 ORTHO05D005563 6.9e-56 221.1 176 71.6
Glyma.09G018300 Glycine max HOM05D003391 ORTHO05D005563 6.9e-56 221.1 156 77.6
Phvul.006G134000 Phaseolus vulgaris HOM05D003391 ORTHO05D005563 9.0e-56 220.7 156 78.2
CSS0023421 Camellia sinensis var. sinensis HOM05D003391 ORTHO05D005563 1.2e-55 220.3 159 76.1
Lalb_Chr18g0057621 Lupinus albus HOM05D003391 ORTHO05D005563 1.2e-55 220.3 164 73.8
arahy.Tifrunner.gnm1.ann1.635YAA Arachis hypogaea HOM05D003391 ORTHO05D005563 1.5e-55 219.9 164 73.8
arahy.Tifrunner.gnm1.ann1.QTWQ8J Arachis hypogaea HOM05D003391 ORTHO05D005563 1.5e-55 219.9 164 73.8
COL.COLO4_06714 Corchorus olitorius HOM05D003391 ORTHO05D005563 1.5e-55 219.9 170 73.5
Duzib084G0647 Durio zibethinus HOM05D003391 ORTHO05D005563 1.5e-55 219.9 170 72.9
Cpa.g.sc122.39 Carica papaya HOM05D003391 ORTHO05D005563 2.0e-55 219.5 166 72.3
Dinv04581 Davidia involucrata HOM05D003391 ORTHO05D005563 2.6e-55 219.2 157 77.1
Aqoxy3G00251 Aquilegia oxysepala HOM05D003391 ORTHO05D005563 3.4e-55 218.8 157 75.2
arahy.Tifrunner.gnm1.ann1.MM6MID Arachis hypogaea HOM05D003391 ORTHO05D005563 4.5e-55 218.4 164 73.2
Haze_17876 Corylus avellana HOM05D003391 ORTHO05D005563 4.5e-55 218.4 164 73.8
Lalb_Chr15g0088521 Lupinus albus HOM05D003391 ORTHO05D005563 4.5e-55 218.4 164 74.4
TWI77G0821 Tripterygium wilfordii HOM05D003391 ORTHO05D005563 4.5e-55 218.4 158 76.6
Cfa018226 Carpinus fangiana HOM05D003391 ORTHO05D005563 1.0e-54 217.2 157 76.4
CSS0020230 Camellia sinensis var. sinensis HOM05D003391 ORTHO05D005563 2.2e-54 216.1 159 75.5
Glyma.15G124200 Glycine max HOM05D003391 ORTHO05D005563 2.2e-54 216.1 156 76.3
Nn7g37683 Nelumbo nucifera HOM05D003391 ORTHO05D005563 1.4e-53 213.4 164 72.0
TAR626G0891 Trochodendron aralioides HOM05D003391 ORTHO05D005563 2.5e-53 212.6 155 75.5
Os01g0906200 Oryza sativa ssp. japonica HOM05D003391 ORTHO05D005563 3.2e-53 212.2 166 69.3
GSVIVG01016094001 Vitis vinifera HOM05D003391 ORTHO05D005563 3.2e-53 212.2 169 71.0
HanXRQChr03g0093781 Helianthus annuus HOM05D003391 ORTHO05D005563 4.2e-53 211.8 157 73.9
Ah.01g004390 Amaranthus hybridus HOM05D003391 ORTHO05D005563 1.2e-52 210.3 158 72.2
EL10Ac9g21140 Beta vulgaris HOM05D003391 ORTHO05D005563 1.6e-52 209.9 158 72.2
ECA236G2623 Erigeron canadensis HOM05D003391 ORTHO05D005563 2.1e-52 209.5 156 72.4
Nitab4.5_0007706g0020 Nicotiana tabacum HOM05D003391 ORTHO05D005563 2.7e-52 209.1 168 70.2
Actinidia37789 Actinidia chinensis HOM05D003391 ORTHO05D005563 4.6e-52 208.4 163 72.4
AUR62022296 Chenopodium quinoa HOM05D003391 ORTHO05D005563 6.1e-52 208.0 158 71.5
PSO675G3205 Papaver somniferum HOM05D003391 ORTHO05D005563 1.0e-51 207.2 155 74.8
Solyc04g049490.3 Solanum lycopersicum HOM05D003391 ORTHO05D005563 2.3e-51 206.1 166 69.9
Sopen04g019460 Solanum pennellii HOM05D003391 ORTHO05D005563 2.3e-51 206.1 166 69.9
PGSC0003DMG402012873 Solanum tuberosum HOM05D003391 ORTHO05D005563 2.3e-51 206.1 166 69.9
Nitab4.5_0000575g0140 Nicotiana tabacum HOM05D003391 ORTHO05D005563 3.9e-51 205.3 166 69.9
Rhsim05G0168000 Rhododendron simsii HOM05D003391 ORTHO05D005563 3.9e-51 205.3 152 74.3
PSO541G1880 Papaver somniferum HOM05D003391 ORTHO05D005563 5.1e-51 204.9 160 73.1
ATR1098G037 Amborella trichopoda HOM05D003391 ORTHO05D005563 6.7e-51 204.5 166 68.7
CAN.G466.12 Capsicum annuum HOM05D003391 ORTHO05D005563 1.1e-50 203.8 168 69.0
HanXRQChr04g0122221 Helianthus annuus HOM05D003391 ORTHO05D005563 1.5e-50 203.4 157 71.3
MBI18_g28220_MAGBIO Magnolia biondii HOM05D003391 ORTHO05D005563 1.5e-50 203.4 166 69.9
Lsat_1_v5_gn_3_133361 Lactuca sativa HOM05D003391 ORTHO05D005563 2.5e-50 202.6 158 72.8
vmacro13793 Vaccinium macrocarpon HOM05D003391 ORTHO05D005563 2.5e-50 202.6 155 71.6
HPP92_006005 Vanilla planifolia HOM05D003391 ORTHO05D005563 7.4e-50 201.1 173 64.7
CAN.G998.14 Capsicum annuum HOM05D003391 ORTHO05D005563 9.7e-50 200.7 168 68.5
SHI21339 Sapria himalayana HOM05D003391 ORTHO05D005563 9.7e-50 200.7 156 71.8
DCAR_003077 Daucus carota HOM05D003391 ORTHO05D005563 8.2e-49 197.6 160 68.1
Zm00001eb144220 Zea mays HOM05D003391 ORTHO05D005563 5.3e-48 194.9 179 62.6
MSTRG.9187 Avicennia marina HOM05D003391 ORTHO05D005563 5.9e-47 191.4 158 65.8
ECA240G2134 Erigeron canadensis HOM05D003391 ORTHO05D005563 1.3e-46 190.3 157 67.5
Hma1.2p1_0583F.1_g183000 Hydrangea macrophylla HOM05D003391 ORTHO05D005563 1.3e-46 190.3 177 62.1
Cc06_g14340 Coffea canephora HOM05D003391 ORTHO05D005563 2.9e-46 189.1 158 69.0
Oeu030440.3 Olea europaea HOM05D003391 ORTHO05D005563 3.8e-46 188.7 154 68.2
Oeu033843.4 Olea europaea HOM05D003391 ORTHO05D005563 1.1e-45 187.2 154 66.9
SalBow4G0334 Salvia bowleyana HOM05D003391 ORTHO05D005563 1.4e-45 186.8 153 68.0
MSTRG.27454 Avicennia marina HOM05D003391 ORTHO05D005563 4.2e-45 185.3 167 62.9
Migut.F02007 Erythranthe guttata HOM05D003391 ORTHO05D005563 1.6e-44 183.3 167 62.3
SEGI_03483 Sequoiadendron giganteum HOM05D003391 ORTHO05D005563 2.1e-44 183.0 158 62.0
SEGI_21663 Sequoiadendron giganteum HOM05D003391 ORTHO05D005563 2.1e-44 183.0 157 61.8
Lj7A654G26 Lonicera japonica HOM05D003391 ORTHO05D005563 4.6e-44 181.8 163 64.4
Lsat_1_v5_gn_7_7561 Lactuca sativa HOM05D003391 ORTHO05D005563 5.7e-42 174.9 171 60.8
SGA_v2.0_scaffold62G21434 Striga asiatica HOM05D003391 ORTHO05D005563 6.3e-41 171.4 171 59.1
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 1.8e-40 169.9 138 68.8
Peaxi162Scf00072g00087 Petunia axillaris HOM05D003391 ORTHO05D005563 3.1e-40 169.1 137 70.8
Dinv10208 Davidia involucrata HOM05D003391 ORTHO05D005563 5.3e-40 168.3 121 76.0
CAN.G5179.1 Capsicum annuum HOM05D003391 ORTHO05D005563 6.9e-40 167.9 161 62.1
CARHR041020 Cardamine hirsuta HOM05D003391 ORTHO05D013251 6.9e-40 167.9 168 61.3
Migut.F01784 Erythranthe guttata HOM05D003391 ORTHO05D005563 1.5e-39 166.8 158 60.8
unitig_899.g14436 Utricularia gibba HOM05D003391 ORTHO05D005563 2.0e-39 166.4 165 58.2
AT1G50970 Arabidopsis thaliana HOM05D003391 ORTHO05D005563 2.7e-36 156.0 165 61.2
Sc24g0003350 Simmondsia chinensis HOM05D003391 ORTHO05D005563 8.8e-35 151.0 121 69.4
AUR62023891 Chenopodium quinoa HOM05D003391 ORTHO05D005563 7.0e-32 141.4 158 56.3
MBI18_g28219_MAGBIO Magnolia biondii HOM05D003391 ORTHO05D005563 9.1e-32 141.0 202 50.0
Hund02122 Selenicereus undatus HOM05D003391 ORTHO05D005563 1.6e-28 130.2 161 52.2
Mapoly0030s0152 Marchantia polymorpha HOM05D003391 ORTHO05D005563 3.0e-27 125.9 173 47.4
SMO196G0220 Selaginella moellendorffii HOM05D003391 ORTHO05D005563 8.8e-27 124.4 144 48.6
Actinidia03950 Actinidia chinensis HOM05D003391 ORTHO05D005563 3.5e-23 112.5 108 62.0
BcaB06g26412 Brassica carinata HOM05D000705 ORTHO05D013251 8.5e-22 107.8 60 86.7
A02p35070 Brassica napus HOM05D003391 ORTHO05D013251 1.5e-21 107.1 102 60.8
BcaB07g33280 Brassica carinata HOM05D000705 ORTHO05D013251 5.5e-21 105.1 60 85.0
Pp3c24_4920 Physcomitrium patens HOM05D003391 ORTHO05D005563 7.2e-21 104.8 163 41.1
Pp3c8_8190 Physcomitrium patens HOM05D003391 ORTHO05D005563 7.2e-21 104.8 162 42.0
Psat1g171000 Pisum sativum HOM05D003391 ORTHO05D005563 8.0e-20 101.3 65 81.5
Atru.chr7.1997 Acer truncatum HOM05D003391 ORTHO05D019401 1.8e-16 90.1 50 86.0
CBR_g35042 Chara braunii HOM05D003391 ORTHO05D005563 2.4e-16 89.7 113 43.4
AL1G58840 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 3.1e-16 89.4 132 47.7
SGA_v2.0_scaffold48G17900 Striga asiatica HOM05D003391 ORTHO05D013251 4.1e-16 89.0 171 39.2
BcaC04g21046 Brassica carinata HOM05D000705 ORTHO05D013251 7.0e-16 88.2 48 89.6
C04p47270 Brassica napus HOM05D003391 ORTHO05D013251 7.0e-16 88.2 48 89.6
C09p36290 Brassica napus HOM05D003391 ORTHO05D040219 7.0e-16 88.2 48 89.6
BolC4t26326H Brassica oleracea HOM05D003391 ORTHO05D013251 7.0e-16 88.2 48 89.6
BolC9t56466H Brassica oleracea HOM05D003391 ORTHO05D040219 7.0e-16 88.2 48 89.6
A01p07480 Brassica napus HOM05D003391 ORTHO05D013251 1.2e-15 87.4 46 91.3
C07p36020 Brassica napus HOM05D003391 ORTHO05D013251 2.0e-15 86.7 48 87.5
BcaC08g44163 Brassica carinata HOM05D003391 ORTHO05D013251 2.7e-15 86.3 48 87.5
C03p10930 Brassica napus HOM05D000705 ORTHO05D013251 4.5e-15 85.5 48 87.5
AL1G58810 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 1.2e-12 77.4 108 50.0
arahy.Tifrunner.gnm1.ann1.TYEM29 Arachis hypogaea HOM05D003391 ORTHO05D021502 6.1e-12 75.1 58 65.5
C04p29410 Brassica napus HOM05D003391 ORTHO05D014971 6.1e-12 75.1 94 46.8
C05p42470 Brassica napus HOM05D003391 ORTHO05D014971 6.1e-12 75.1 99 44.4
C08p12200 Brassica napus HOM05D003391 ORTHO05D014971 1.4e-11 73.9 99 44.4
BolC8t48861H Brassica oleracea HOM05D003391 ORTHO05D014971 1.4e-11 73.9 99 44.4
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 1.8e-11 73.6 95 45.3
BolC3t14904H Brassica oleracea HOM05D003391 ORTHO05D014971 1.8e-11 73.6 99 43.4
PRCOL_00003915 Prasinoderma coloniale HOM05D003391 ORTHO05D005563 2.3e-11 73.2 68 50.0
BcaC07g38452 Brassica carinata HOM05D040375 ORTHO05D014971 3.0e-11 72.8 100 44.0
BolC7t43185H Brassica oleracea HOM05D003391 ORTHO05D014971 3.0e-11 72.8 99 43.4
BcaB04g20116 Brassica carinata HOM05D003391 ORTHO05D013251 4.4e-10 68.9 38 84.2
BcaB06g26410 Brassica carinata HOM05D000705 ORTHO05D013251 9.8e-10 67.8 37 86.5
C01p37660 Brassica napus HOM05D003391 ORTHO05D014971 1.3e-09 67.4 99 41.4
BolC2t08516H Brassica oleracea HOM05D000705 ORTHO05D013251 1.7e-09 67.0 36 86.1
arahy.Tifrunner.gnm1.ann1.557ZRD Arachis hypogaea HOM05D003391 ORTHO05D021502 3.7e-09 65.9 57 59.6
MCO12G450 Micromonas commoda HOM05D003391 ORTHO05D005563 3.7e-09 65.9 60 48.3
arahy.Tifrunner.gnm1.ann1.0E0YFN Arachis hypogaea HOM05D003391 ORTHO05D021502 8.3e-09 64.7 66 57.6
arahy.Tifrunner.gnm1.ann1.KRT6BL Arachis hypogaea HOM05D003391 ORTHO05D021502 8.3e-09 64.7 66 57.6
arahy.Tifrunner.gnm1.ann1.FZGA0Y Arachis hypogaea HOM05D003391 ORTHO05D021502 2.4e-08 63.2 67 55.2
arahy.Tifrunner.gnm1.ann1.IXQ0QW Arachis hypogaea HOM05D003391 ORTHO05D021502 2.4e-08 63.2 67 55.2
Sp1g37720 Schrenkiella parvula HOM05D003391 ORTHO05D372435 3.1e-08 62.8 143 35.0


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