Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0206 Cannabis sativa HOM05D004663 ORTHO05D006325 3.3e-175 618.2 302 100.0
Prupe.1G344500 Prunus persica HOM05D004663 ORTHO05D006325 2.9e-123 445.7 282 78.0
Thecc.02G295300 Theobroma cacao HOM05D004663 ORTHO05D006325 2.5e-122 442.6 309 71.8
MD16G1006100 Malus domestica HOM05D004663 ORTHO05D006325 4.2e-122 441.8 319 71.5
PGR142G1504 Punica granatum HOM05D004663 ORTHO05D006325 1.2e-121 440.3 319 69.6
arahy.Tifrunner.gnm1.ann1.W91FXI Arachis hypogaea HOM05D004663 ORTHO05D006325 2.7e-121 439.1 301 72.4
arahy.Tifrunner.gnm1.ann1.NK7YGL Arachis hypogaea HOM05D004663 ORTHO05D006325 3.6e-121 438.7 301 72.4
Eucgr.J00843 Eucalyptus grandis HOM05D004663 ORTHO05D006325 2.3e-120 436.0 279 76.0
Glyma.12G028400 Glycine max HOM05D004663 ORTHO05D006325 6.7e-120 434.5 305 71.1
FvH4_4g36650 Fragaria vesca HOM05D004663 ORTHO05D006325 4.3e-119 431.8 315 69.5
RcHm_v2.0_Chr4g0446361 Rosa chinensis HOM05D004663 ORTHO05D006325 2.2e-118 429.5 312 69.9
FAN12G1833 Fragaria x ananassa HOM05D004663 ORTHO05D006325 2.8e-118 429.1 315 69.2
CiPaw.06G057700 Carya illinoinensis HOM05D004663 ORTHO05D006325 1.1e-117 427.2 279 73.5
Gohir.D12G156000 Gossypium hirsutum HOM05D004663 ORTHO05D006325 2.4e-117 426.0 305 71.1
Gorai.008G168600 Gossypium raimondii HOM05D004663 ORTHO05D006325 2.4e-117 426.0 305 71.1
GSVIVG01010186001 Vitis vinifera HOM05D004663 ORTHO05D006325 3.1e-117 425.6 300 70.7
Atru.chr11.1191 Acer truncatum HOM05D004663 ORTHO05D006325 5.3e-117 424.9 284 73.9
Atru.chr11.1197 Acer truncatum HOM05D004663 ORTHO05D006325 5.3e-117 424.9 284 73.9
Manes.03G082300 Manihot esculenta HOM05D004663 ORTHO05D006325 6.9e-117 424.5 312 69.9
Potri.010G169600 Populus trichocarpa HOM05D004663 ORTHO05D006325 6.9e-117 424.5 314 69.1
TWI74G1669 Tripterygium wilfordii HOM05D004663 ORTHO05D006325 6.9e-117 424.5 299 70.6
Haze_11737 Corylus avellana HOM05D004663 ORTHO05D006325 1.2e-116 423.7 342 64.9
Hma1.2p1_0499F.1_g166870 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 1.5e-116 423.3 294 70.1
Nn4g24912 Nelumbo nucifera HOM05D004663 ORTHO05D006325 1.5e-116 423.3 277 73.3
ClCG11G001190 Citrullus lanatus HOM05D004663 ORTHO05D006325 4.5e-116 421.8 272 76.1
Duzib251G0299 Durio zibethinus HOM05D004663 ORTHO05D006325 5.9e-116 421.4 310 68.4
Lj3g0017139 Lotus japonicus HOM05D004663 ORTHO05D006325 7.7e-116 421.0 276 74.6
TPR.G21555 Trifolium pratense HOM05D004663 ORTHO05D006325 2.2e-115 419.5 300 72.0
VMungo1127G1383 Vigna mungo HOM05D004663 ORTHO05D006325 2.9e-115 419.1 327 63.6
Hund24313 Selenicereus undatus HOM05D004663 ORTHO05D006325 3.8e-115 418.7 278 73.0
CAN.G1846.2 Capsicum annuum HOM05D004663 ORTHO05D006325 2.5e-114 416.0 313 66.5
Migut.L00857 Erythranthe guttata HOM05D004663 ORTHO05D006325 3.2e-114 415.6 315 66.7
Sed0002621 Sechium edule HOM05D004663 ORTHO05D006325 4.2e-114 415.2 274 74.5
CsaV3_5G013250 Cucumis sativus L. HOM05D004663 ORTHO05D006325 5.5e-114 414.8 272 75.0
Psat7g174040 Pisum sativum HOM05D004663 ORTHO05D006325 7.2e-114 414.5 310 68.1
Ca_03037_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 1.6e-113 413.3 282 72.0
Lsat_1_v5_gn_8_32481 Lactuca sativa HOM05D004663 ORTHO05D006325 2.1e-113 412.9 274 71.5
PSO675G5757 Papaver somniferum HOM05D004663 ORTHO05D006325 2.7e-113 412.5 324 63.3
Actinidia13293 Actinidia chinensis HOM05D004663 ORTHO05D006325 3.6e-113 412.1 276 73.2
COL.COLO4_16617 Corchorus olitorius HOM05D004663 ORTHO05D006325 4.7e-113 411.8 350 62.0
PSO017G2988 Papaver somniferum HOM05D004663 ORTHO05D006325 4.7e-113 411.8 319 63.9
CSS0001950 Camellia sinensis var. sinensis HOM05D004663 ORTHO05D006325 6.1e-113 411.4 281 71.9
Cc11_g05100 Coffea canephora HOM05D004663 ORTHO05D006325 6.1e-113 411.4 283 70.7
PGSC0003DMG400019834 Solanum tuberosum HOM05D004663 ORTHO05D006325 1.0e-112 410.6 274 71.2
AL3G31940 Arabidopsis lyrata HOM05D004663 ORTHO05D006325 1.4e-112 410.2 330 64.8
HanXRQChr13g0390021 Helianthus annuus HOM05D004663 ORTHO05D006325 2.3e-112 409.5 269 71.4
THA.LOC104820417 Tarenaya hassleriana HOM05D004663 ORTHO05D006325 2.3e-112 409.5 284 71.1
Sc10g0005860 Simmondsia chinensis HOM05D004663 ORTHO05D006325 3.9e-112 408.7 323 63.5
Carub.0003s1841 Capsella rubella HOM05D004663 ORTHO05D006325 6.7e-112 407.9 328 63.1
AT3G18630 Arabidopsis thaliana HOM05D004663 ORTHO05D006325 1.5e-111 406.8 326 64.7
HanXRQChr13g0388091 Helianthus annuus HOM05D004663 ORTHO05D006325 1.5e-111 406.8 269 71.0
Ah.01g013090 Amaranthus hybridus HOM05D004663 ORTHO05D006325 2.0e-111 406.4 321 64.8
Zm00001eb066560 Zea mays HOM05D004663 ORTHO05D006325 2.0e-111 406.4 298 66.1
Medtr4g074330 Medicago truncatula HOM05D004663 ORTHO05D006325 3.3e-111 405.6 300 68.7
Solyc02g021060.4 Solanum lycopersicum HOM05D004663 ORTHO05D006325 5.7e-111 404.8 267 71.9
Sopen02g005340 Solanum pennellii HOM05D004663 ORTHO05D006325 5.7e-111 404.8 267 71.9
BcaB06g25915 Brassica carinata HOM05D004663 ORTHO05D006325 7.4e-111 404.4 318 66.0
Thhalv10021116m.g Eutrema salsugineum HOM05D004663 ORTHO05D006325 7.4e-111 404.4 285 69.5
Sp3g16700 Schrenkiella parvula HOM05D004663 ORTHO05D006325 2.8e-110 402.5 285 69.8
BcaC05g28590 Brassica carinata HOM05D004663 ORTHO05D006325 3.7e-110 402.1 322 65.2
C05p46970 Brassica napus HOM05D004663 ORTHO05D006325 3.7e-110 402.1 322 65.2
BolC5t33426H Brassica oleracea HOM05D004663 ORTHO05D006325 3.7e-110 402.1 322 65.2
ECA233G5178 Erigeron canadensis HOM05D004663 ORTHO05D006325 3.7e-110 402.1 277 69.0
BraA05t21940Z Brassica rapa HOM05D004663 ORTHO05D006325 6.3e-110 401.4 320 65.0
Rhsim05G0224300 Rhododendron simsii HOM05D004663 ORTHO05D006325 6.3e-110 401.4 284 69.4
Aa31LG8G5480 Aethionema arabicum HOM05D004663 ORTHO05D006325 1.1e-109 400.6 320 64.7
A05p30980 Brassica napus HOM05D004663 ORTHO05D006325 1.4e-109 400.2 319 65.2
CARHR094010 Cardamine hirsuta HOM05D004663 ORTHO05D006325 3.1e-109 399.1 286 69.2
Lalb_Chr03g0024891 Lupinus albus HOM05D004663 ORTHO05D006325 4.1e-109 398.7 298 67.8
HPP92_022410 Vanilla planifolia HOM05D004663 ORTHO05D006325 1.2e-108 397.1 320 62.8
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 3.5e-108 395.6 298 67.8
BcaC09g48820 Brassica carinata HOM05D004663 ORTHO05D006325 2.2e-107 392.9 286 67.5
C01p45610 Brassica napus HOM05D004663 ORTHO05D006325 2.2e-107 392.9 286 67.5
BolC1t04522H Brassica oleracea HOM05D004663 ORTHO05D006325 2.2e-107 392.9 286 67.5
TAR629G1859 Trochodendron aralioides HOM05D004663 ORTHO05D006325 2.9e-107 392.5 319 62.4
EL10Ac9g22902 Beta vulgaris HOM05D004663 ORTHO05D006325 3.8e-107 392.1 276 69.9
DCAR_026912 Daucus carota HOM05D004663 ORTHO05D006325 3.8e-107 392.1 327 61.8
Phvul.011G031800 Phaseolus vulgaris HOM05D004663 ORTHO05D006325 8.5e-107 391.0 275 68.4
Gohir.A12G152600 Gossypium hirsutum HOM05D004663 ORTHO05D006325 1.9e-106 389.8 277 72.2
Os04g0673400 Oryza sativa ssp. japonica HOM05D004663 ORTHO05D006325 3.2e-106 389.0 248 73.0
SEGI_04236 Sequoiadendron giganteum HOM05D004663 ORTHO05D006325 3.2e-106 389.0 268 68.7
FAN07G1521 Fragaria x ananassa HOM05D004663 ORTHO05D006325 7.2e-106 387.9 291 68.7
ATR0618G342 Amborella trichopoda HOM05D004663 ORTHO05D006325 5.2e-104 381.7 291 66.3
AUR62012865 Chenopodium quinoa HOM05D004663 ORTHO05D006325 2.0e-103 379.8 284 68.0
BraA01t03662Z Brassica rapa HOM05D004663 ORTHO05D006325 4.4e-103 378.6 300 64.7
AUR62017645 Chenopodium quinoa HOM05D004663 ORTHO05D006325 4.1e-101 372.1 290 65.5
AagrBONN_evm.TU.Sc2ySwM_344.3482 Anthoceros agrestis HOM05D004663 ORTHO05D006325 1.2e-100 370.5 274 64.6
SGA_v2.0_scaffold258G45746 Striga asiatica HOM05D004663 ORTHO05D006325 2.6e-100 369.4 268 68.3
Mapoly0028s0106 Marchantia polymorpha HOM05D004663 ORTHO05D006325 3.5e-100 369.0 268 66.0
TAR628G1419 Trochodendron aralioides HOM05D004663 ORTHO05D006325 5.9e-100 368.2 244 71.3
Nitab4.5_0002192g0110 Nicotiana tabacum HOM05D004663 ORTHO05D006325 2.9e-99 365.9 313 62.3
Nitab4.5_0004043g0010 Nicotiana tabacum HOM05D004663 ORTHO05D006325 5.0e-99 365.2 316 59.8
MSTRG.8079 Avicennia marina HOM05D004663 ORTHO05D006325 7.2e-98 361.3 292 64.4
A01p35830 Brassica napus HOM05D004663 ORTHO05D006325 9.4e-98 360.9 303 62.0
Pp3c14_15380 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.2e-97 360.5 265 65.7
SMO361G0720 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 4.7e-97 358.6 267 63.3
Peaxi162Scf00818g00118 Petunia axillaris HOM05D004663 ORTHO05D006325 6.1e-97 358.2 294 63.6
Duzib128G0407 Durio zibethinus HOM05D004663 ORTHO05D006325 1.4e-96 357.1 288 64.2
Medtr4g074300 Medicago truncatula HOM05D004663 ORTHO05D006325 1.4e-96 357.1 285 63.2
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 1.5e-95 353.6 221 77.4
CDE05G3445 Ceratophyllum demersum HOM05D004663 ORTHO05D006325 1.1e-93 347.4 313 57.8
HPP92_027507 Vanilla planifolia HOM05D004663 ORTHO05D006325 1.0e-91 340.9 228 72.8
MELO3C026796.2 Cucumis melo HOM05D004663 ORTHO05D006325 1.8e-88 330.1 224 73.7
SalBow2G2230 Salvia bowleyana HOM05D004663 ORTHO05D006325 3.0e-88 329.3 221 72.4
Hma1.2p1_0499F.1_g166860 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 2.0e-87 326.6 244 66.4
Sabra10G0129400 Salix brachista HOM05D004663 ORTHO05D006325 9.8e-87 324.3 254 66.9
Medtr4g074280 Medicago truncatula HOM05D004663 ORTHO05D006325 4.9e-86 322.0 283 58.7
SHI04172 Sapria himalayana HOM05D004663 ORTHO05D006325 4.9e-86 322.0 375 51.2
Dinv11709 Davidia involucrata HOM05D004663 ORTHO05D006325 2.0e-84 316.6 229 66.8
CBR_g10874 Chara braunii HOM05D004663 ORTHO05D006325 2.9e-83 312.8 233 62.7
Oeu044073.1 Olea europaea HOM05D000222 ORTHO05D004962 7.2e-82 308.1 306 54.9
MCO16G090 Micromonas commoda HOM05D004663 ORTHO05D006325 2.1e-81 306.6 237 60.8
SMO361G0033 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 8.0e-81 304.7 240 60.8
SMO087G0003 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 1.7e-78 297.0 240 60.4
Cre17.g746347 Chlamydomonas reinhardtii HOM05D004663 ORTHO05D006325 2.7e-68 263.1 295 48.1
Ca_29479_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 1.5e-63 247.3 217 54.4
Cpa.g.sc0.166 Carica papaya HOM05D004663 ORTHO05D006325 1.6e-60 237.3 193 65.3
Ciclev10006661m.g Citrus clementina HOM05D004663 ORTHO05D006325 1.7e-59 233.8 180 65.0
unitig_22.g6361 Utricularia gibba HOM05D004663 ORTHO05D006325 2.1e-57 226.9 167 67.1
MBI03_g05116_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 8.1e-57 224.9 210 59.0
Lj9C88T6 Lonicera japonica HOM05D004663 ORTHO05D006325 1.4e-56 224.2 238 53.4
PRCOL_00002421 Prasinoderma coloniale HOM05D001829 ORTHO05D007093 5.8e-55 218.8 185 56.2
Haze_26212 Corylus avellana HOM05D004663 ORTHO05D006325 9.9e-55 218.0 297 43.4
Lju1225A1T39 Lonicera japonica HOM05D004663 ORTHO05D006325 6.8e-48 195.3 175 57.7
arahy.Tifrunner.gnm1.ann1.AZJV2P Arachis hypogaea HOM05D004663 ORTHO05D006325 2.4e-45 186.8 119 77.3
MD03G1100100 Malus domestica HOM05D004663 ORTHO05D006325 1.9e-42 177.2 136 65.4
Glyma.08G121000 Glycine max HOM05D004663 ORTHO05D006325 9.0e-40 168.3 100 78.0
Pp3c9_12680 Physcomitrium patens HOM05D004663 ORTHO05D012250 9.0e-40 168.3 189 47.1
Pp3c15_19430 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.2e-39 167.9 188 47.9
MBI03_g05117_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 6.4e-38 162.2 85 89.4
Pp3c16_12590 Physcomitrium patens HOM05D004663 ORTHO05D006325 8.4e-38 161.8 188 46.3
Glyma.11G103600 Glycine max HOM05D004663 ORTHO05D006325 1.1e-37 161.4 102 79.4
Pp3c16_10730 Physcomitrium patens HOM05D004663 ORTHO05D006325 4.2e-37 159.5 189 46.0
Pp3s67_100 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.1e-33 147.1 184 42.9
Pp3c16_6060 Physcomitrium patens HOM05D004663 ORTHO05D012250 1.8e-32 144.1 189 42.9
Lju1225C2G8 Lonicera japonica HOM05D004663 ORTHO05D006325 6.9e-32 142.1 103 70.9
arahy.Tifrunner.gnm1.ann1.A394HF Arachis hypogaea HOM05D004663 ORTHO05D006325 6.4e-30 135.6 77 81.8
Lalb_Chr01g0001561 Lupinus albus HOM05D004663 ORTHO05D006325 7.1e-29 132.1 166 49.4
Medtr4g077140 Medicago truncatula HOM05D004663 ORTHO05D006325 6.0e-28 129.0 84 71.4
Pp3c10_11550 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.3e-27 127.1 189 38.1
Pp3c1_10590 Physcomitrium patens HOM05D004663 ORTHO05D006325 3.7e-25 119.8 139 45.3
Pp3c14_3990 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.1e-24 118.2 176 37.5
Pp3c14_4000 Physcomitrium patens HOM05D004663 ORTHO05D012250 1.1e-24 118.2 176 37.5
Pp3c11_15750 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.8e-24 117.5 186 36.0
CBR_g4801 Chara braunii HOM05D004663 ORTHO05D134352 7.6e-23 112.1 139 46.8
Pp3c1_280 Physcomitrium patens HOM05D004663 ORTHO05D006325 6.7e-19 99.0 189 31.7
Pp3c8_4630 Physcomitrium patens HOM05D004663 ORTHO05D311796 1.1e-16 91.7 180 32.2
Pp3c6_15710 Physcomitrium patens HOM05D004663 ORTHO05D313664 2.5e-13 80.5 188 31.4
AUR62002800 Chenopodium quinoa HOM05D004663 ORTHO05D006325 2.4e-08 63.9 32 84.4
Medtr3g063510 Medicago truncatula HOM05D004663 ORTHO05D006325 4.1e-08 63.2 58 56.9
Medtr4g074270 Medicago truncatula HOM05D004663 ORTHO05D006325 2.0e-07 60.8 69 47.8
Pp3c4_24930 Physcomitrium patens HOM05D004663 ORTHO05D006325 3.4e-07 60.1 92 34.8
Pp3c4_1950 Physcomitrium patens HOM05D004663 ORTHO05D318537 4.5e-07 59.7 49 59.2


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