Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2891 Cannabis sativa HOM05D001849 ORTHO05D004075 0.0e+00 2239.5 1162 100.0
Prupe.1G319400 Prunus persica HOM05D001849 ORTHO05D004075 6.8e-120 436.4 1010 35.1
Dinv16157 Davidia involucrata HOM05D001849 ORTHO05D004075 2.5e-114 417.9 999 35.4
QL01p003145 Quercus lobata HOM05D001849 ORTHO05D004075 8.9e-104 382.9 852 35.1
TAR622G0522 Trochodendron aralioides HOM05D001849 ORTHO05D004075 1.5e-95 355.5 1040 31.6
Actinidia14933 Actinidia chinensis HOM05D001849 ORTHO05D004075 4.0e-88 330.9 990 31.9
Cfa015821 Carpinus fangiana HOM05D001849 ORTHO05D004075 2.7e-84 318.2 680 35.7
Dinv04913 Davidia involucrata HOM05D001849 ORTHO05D004075 1.5e-74 285.8 853 30.6
Atru.chr11.324 Acer truncatum HOM05D001849 ORTHO05D004075 1.9e-74 285.4 403 43.2
CiPaw.05G244500 Carya illinoinensis HOM05D001849 ORTHO05D004075 3.7e-73 281.2 998 30.0
Haze_00674 Corylus avellana HOM05D001849 ORTHO05D004075 8.1e-73 280.0 484 40.3
Nn3g17987 Nelumbo nucifera HOM05D001849 ORTHO05D004075 1.6e-68 265.8 964 28.0
Rhsim09G0102300 Rhododendron simsii HOM05D001849 ORTHO05D004075 9.6e-66 256.5 1027 28.9
Potri.001G165800 Populus trichocarpa HOM05D001849 ORTHO05D004075 3.4e-63 248.1 908 29.4
TWI59G0043 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 3.8e-62 244.6 956 28.5
Solyc06g063010.4 Solanum lycopersicum HOM05D001849 ORTHO05D004075 5.5e-61 240.7 881 28.3
Sopen06g022460 Solanum pennellii HOM05D001849 ORTHO05D004075 1.2e-60 239.6 875 27.9
Sabra01G0127500 Salix brachista HOM05D001849 ORTHO05D004075 1.0e-59 236.5 910 28.6
Manes.04G148200 Manihot esculenta HOM05D001849 ORTHO05D004075 2.3e-59 235.3 876 28.1
Migut.I01106 Erythranthe guttata HOM05D001849 ORTHO05D004075 8.7e-59 233.4 878 27.1
QL05p003642 Quercus lobata HOM05D001849 ORTHO05D004075 8.7e-59 233.4 856 28.5
Nn8g38564 Nelumbo nucifera HOM05D001849 ORTHO05D004075 1.9e-58 232.3 962 28.9
TWI14G1157 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 2.5e-58 231.9 863 28.3
Manes.14G108850 Manihot esculenta HOM05D001849 ORTHO05D004075 3.3e-58 231.5 861 29.0
Aqoxy7G04079 Aquilegia oxysepala HOM05D001849 ORTHO05D004075 4.3e-58 231.1 931 28.2
Lj3g0013610 Lotus japonicus HOM05D001849 ORTHO05D004075 1.6e-57 229.2 925 27.0
Peaxi162Scf00207g01546 Petunia axillaris HOM05D001849 ORTHO05D004075 1.6e-57 229.2 867 28.0
ATR0681G273 Amborella trichopoda HOM05D001849 ORTHO05D004075 8.2e-57 226.9 979 26.8
Nitab4.5_0003137g0070 Nicotiana tabacum HOM05D001849 ORTHO05D004075 4.1e-56 224.6 885 27.9
CiPaw.01G215800 Carya illinoinensis HOM05D001849 ORTHO05D004075 6.9e-56 223.8 859 28.8
Lj9C535T9 Lonicera japonica HOM05D001849 ORTHO05D004075 1.2e-55 223.0 928 26.9
HPP92_011068 Vanilla planifolia HOM05D001849 ORTHO05D004075 2.0e-55 222.2 860 26.3
Lalb_Chr17g0343441 Lupinus albus HOM05D001849 ORTHO05D004075 2.6e-55 221.9 898 28.0
COL.COLO4_30798 Corchorus olitorius HOM05D001849 ORTHO05D004075 5.9e-55 220.7 888 28.0
Glyma.16G010400 Glycine max HOM05D001849 ORTHO05D004075 6.5e-54 217.2 851 28.0
Gorai.010G174200 Gossypium raimondii HOM05D001849 ORTHO05D004075 8.5e-54 216.9 880 28.3
Nitab4.5_0002716g0060 Nicotiana tabacum HOM05D001849 ORTHO05D004075 8.5e-54 216.9 882 27.4
Psat4g166800 Pisum sativum HOM05D001849 ORTHO05D004075 8.5e-54 216.9 897 27.6
CiPaw.02G133700 Carya illinoinensis HOM05D001849 ORTHO05D004075 1.1e-53 216.5 862 27.8
CAN.G1743.7 Capsicum annuum HOM05D001849 ORTHO05D004075 1.4e-53 216.1 877 27.7
Gohir.D06G149500 Gossypium hirsutum HOM05D001849 ORTHO05D004075 1.4e-53 216.1 886 28.1
Medtr8g021980 Medicago truncatula HOM05D001849 ORTHO05D004075 1.9e-53 215.7 920 27.0
Dinv37967 Davidia involucrata HOM05D001849 ORTHO05D004075 3.2e-53 214.9 918 27.2
FvH4_6g35180 Fragaria vesca HOM05D001849 ORTHO05D004075 7.2e-53 213.8 939 27.7
GSVIVG01016716001 Vitis vinifera HOM05D001849 ORTHO05D004075 7.2e-53 213.8 883 28.3
Duzib235G1365 Durio zibethinus HOM05D001849 ORTHO05D004075 9.4e-53 213.4 887 27.7
Cc04_g01030 Coffea canephora HOM05D001849 ORTHO05D004075 1.6e-52 212.6 888 27.9
RcHm_v2.0_Chr2g0146441 Rosa chinensis HOM05D001849 ORTHO05D004075 4.6e-52 211.1 938 27.9
Gohir.A05G138700 Gossypium hirsutum HOM05D001849 ORTHO05D004075 7.9e-52 210.3 880 28.1
VMungo0331G0811 Vigna mungo HOM05D001849 ORTHO05D004075 1.4e-51 209.5 1043 25.6
Hma1.2p1_0229F.1_g096780 Hydrangea macrophylla HOM05D001849 ORTHO05D004075 1.8e-51 209.1 876 28.5
FAN02G1816 Fragaria x ananassa HOM05D001849 ORTHO05D004075 2.3e-51 208.8 863 28.3
SalBow6G5403 Salvia bowleyana HOM05D001849 ORTHO05D004075 6.7e-51 207.2 1008 25.6
Gorai.009G145100 Gossypium raimondii HOM05D001849 ORTHO05D004075 8.8e-51 206.8 876 28.4
CSS0014980 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 4.3e-50 204.5 645 29.3
SGA_v2.0_scaffold71G23886 Striga asiatica HOM05D001849 ORTHO05D004075 4.3e-50 204.5 894 27.2
Gohir.D05G140900 Gossypium hirsutum HOM05D001849 ORTHO05D004075 5.7e-50 204.1 871 28.1
MSTRG.22534 Avicennia marina HOM05D001849 ORTHO05D004075 7.4e-50 203.8 850 26.6
Thecc.06G125000 Theobroma cacao HOM05D001849 ORTHO05D004075 9.7e-50 203.4 863 27.2
FAN05G2069 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.3e-49 203.0 878 28.2
AL2G32060 Arabidopsis lyrata HOM05D001849 ORTHO05D004075 4.8e-49 201.1 891 28.3
Haze_16065 Corylus avellana HOM05D001849 ORTHO05D004075 8.2e-49 200.3 332 41.3
Actinidia32207 Actinidia chinensis HOM05D001849 ORTHO05D004075 1.1e-48 199.9 248 46.4
EL10Ac7g16445 Beta vulgaris HOM05D001849 ORTHO05D004075 1.4e-48 199.5 975 26.6
FAN14G5889 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.8e-48 199.1 952 27.0
MBI19_g29883_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 1.8e-48 199.1 277 44.4
PSO386G0247 Papaver somniferum HOM05D001849 ORTHO05D004075 2.4e-48 198.7 875 27.4
Lj6A751T55 Lonicera japonica HOM05D001849 ORTHO05D004075 3.1e-48 198.4 188 54.8
Sc15g0000590 Simmondsia chinensis HOM05D001849 ORTHO05D004075 3.1e-48 198.4 868 26.5
Carub.0002s1924 Capsella rubella HOM05D001849 ORTHO05D004075 5.3e-48 197.6 251 45.0
Atru.chr1.4088 Acer truncatum HOM05D001849 ORTHO05D004075 6.9e-48 197.2 811 26.4
Glyma.07G042100 Glycine max HOM05D001849 ORTHO05D004075 6.9e-48 197.2 333 37.8
Thhalv10018006m.g Eutrema salsugineum HOM05D001849 ORTHO05D004075 1.5e-47 196.1 983 26.9
CSS0013236 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 2.0e-47 195.7 262 45.8
CSS0036669 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 2.0e-47 195.7 262 45.8
FAN09G3103 Fragaria x ananassa HOM05D001849 ORTHO05D004075 4.5e-47 194.5 991 26.6
TPR.G29998 Trifolium pratense HOM05D001849 ORTHO05D004075 4.5e-47 194.5 445 32.1
SalBow6G6581 Salvia bowleyana HOM05D001849 ORTHO05D004075 1.0e-46 193.4 938 25.8
Ciclev10024725m.g Citrus clementina HOM05D001849 ORTHO05D004075 1.7e-46 192.6 806 27.5
Cfa003510 Carpinus fangiana HOM05D001849 ORTHO05D004075 2.2e-46 192.2 331 40.2
Sabra03G0040600 Salix brachista HOM05D001849 ORTHO05D004075 5.0e-46 191.0 281 44.8
Phvul.010G125600 Phaseolus vulgaris HOM05D001849 ORTHO05D004075 1.1e-45 189.9 261 43.7
Prupe.3G037300 Prunus persica HOM05D001849 ORTHO05D004075 1.4e-45 189.5 258 44.6
AT1G72390 Arabidopsis thaliana HOM05D001849 ORTHO05D004075 1.9e-45 189.1 251 45.0
Hund18671 Selenicereus undatus HOM05D001849 ORTHO05D004075 2.5e-45 188.7 1045 24.7
HanXRQChr10g0311861 Helianthus annuus HOM05D001849 ORTHO05D004075 3.2e-45 188.3 990 26.3
MD17G1148700 Malus domestica HOM05D001849 ORTHO05D004075 3.2e-45 188.3 251 46.6
MD09G1178000 Malus domestica HOM05D001849 ORTHO05D004075 5.5e-45 187.6 247 46.6
THA.LOC104812264 Tarenaya hassleriana HOM05D001849 ORTHO05D004075 9.4e-45 186.8 248 44.0
arahy.Tifrunner.gnm1.ann1.M8Z2DU Arachis hypogaea HOM05D001849 ORTHO05D004075 1.2e-44 186.4 337 37.4
MBI16_g25623_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 1.2e-44 186.4 973 26.5
Nitab4.5_0012739g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.2e-44 186.4 781 25.9
Nitab4.5_0004322g0020 Nicotiana tabacum HOM05D001849 ORTHO05D004075 2.1e-44 185.7 783 24.8
PSO386G0057 Papaver somniferum HOM05D001849 ORTHO05D004075 2.1e-44 185.7 1011 26.4
Duzib192G0748 Durio zibethinus HOM05D001849 ORTHO05D004075 2.7e-44 185.3 257 46.3
arahy.Tifrunner.gnm1.ann1.NEIN3W Arachis hypogaea HOM05D001849 ORTHO05D004075 4.7e-44 184.5 336 37.2
Oeu011098.1 Olea europaea HOM05D001849 ORTHO05D004075 7.9e-44 183.7 247 45.7
PSO724G0042 Papaver somniferum HOM05D001849 ORTHO05D004075 7.9e-44 183.7 1010 26.5
CARHR065290 Cardamine hirsuta HOM05D001849 ORTHO05D004075 1.0e-43 183.3 267 41.9
Sp5g27470 Schrenkiella parvula HOM05D001849 ORTHO05D004075 1.0e-43 183.3 243 42.4
Medtr5g009590 Medicago truncatula HOM05D001849 ORTHO05D004075 2.3e-43 182.2 234 44.4
BraA07t31416Z Brassica rapa HOM05D001849 ORTHO05D004075 3.0e-43 181.8 255 42.7
Lalb_Chr04g0253751 Lupinus albus HOM05D001849 ORTHO05D004075 3.0e-43 181.8 439 33.3
PGR102G3102 Punica granatum HOM05D001849 ORTHO05D004075 5.1e-43 181.0 249 45.0
Potri.003G069200 Populus trichocarpa HOM05D001849 ORTHO05D004075 6.7e-43 180.6 809 25.6
A07p38580 Brassica napus HOM05D001849 ORTHO05D004075 8.8e-43 180.3 256 43.4
Lalb_Chr10g0101311 Lupinus albus HOM05D001849 ORTHO05D004075 1.1e-42 179.9 220 48.6
BcaC03g15374 Brassica carinata HOM05D001849 ORTHO05D004075 1.5e-42 179.5 244 42.6
C02p29880 Brassica napus HOM05D001849 ORTHO05D004075 1.5e-42 179.5 244 42.6
C06p46750 Brassica napus HOM05D001849 ORTHO05D004075 1.5e-42 179.5 256 43.8
BolC2t09038H Brassica oleracea HOM05D001849 ORTHO05D004075 1.5e-42 179.5 244 42.6
HanXRQChr12g0360181 Helianthus annuus HOM05D001849 ORTHO05D004075 1.5e-42 179.5 1130 25.3
CDE06G0789 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 4.4e-42 177.9 833 25.5
BolC6t39719H Brassica oleracea HOM05D001849 ORTHO05D004075 5.7e-42 177.6 258 43.0
CANSAT56G4149 Cannabis sativa HOM05D001849 ORTHO05D004075 5.7e-42 177.6 305 41.3
Zm00001eb203360 Zea mays HOM05D001849 ORTHO05D004075 5.7e-42 177.6 862 25.9
Aa31LG4G2730 Aethionema arabicum HOM05D001849 ORTHO05D004075 7.4e-42 177.2 262 41.6
Ah.15g095140 Amaranthus hybridus HOM05D001849 ORTHO05D004075 1.3e-41 176.4 249 40.6
Ca_23413_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004075 3.7e-41 174.9 422 33.2
MELO3C024333.2 Cucumis melo HOM05D001849 ORTHO05D004075 8.2e-41 173.7 258 44.6
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 1.4e-40 172.9 168 53.0
DCAR_026425 Daucus carota HOM05D001849 ORTHO05D004075 1.8e-40 172.6 994 24.3
BcaB05g24751 Brassica carinata HOM05D001849 ORTHO05D004075 2.4e-40 172.2 243 42.0
AUR62009923 Chenopodium quinoa HOM05D001849 ORTHO05D004075 3.1e-40 171.8 251 41.0
ClCG09G001150 Citrullus lanatus HOM05D001849 ORTHO05D004075 4.1e-40 171.4 259 44.0
Sed0014139 Sechium edule HOM05D001849 ORTHO05D004075 5.3e-40 171.0 237 45.6
CsaV3_7G034240 Cucumis sativus L. HOM05D001849 ORTHO05D004075 7.0e-40 170.6 261 43.7
A02p17980 Brassica napus HOM05D001849 ORTHO05D004075 9.1e-40 170.2 243 41.6
ECA234G1749 Erigeron canadensis HOM05D001849 ORTHO05D004075 1.5e-39 169.5 924 25.9
BraA02t06845Z Brassica rapa HOM05D001849 ORTHO05D004075 3.4e-39 168.3 248 40.7
unitig_747.g21722 Utricularia gibba HOM05D001849 ORTHO05D004075 2.7e-36 158.7 254 39.0
Psat5g189840 Pisum sativum HOM05D001849 ORTHO05D004075 1.4e-35 156.4 340 32.9
Psat5g189920 Pisum sativum HOM05D004963 ORTHO05D006638 2.3e-35 155.6 212 41.5
TAR626G0936 Trochodendron aralioides HOM05D001849 ORTHO05D004075 4.4e-34 151.4 206 45.1
vmacro15055 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 5.7e-34 151.0 198 46.0
Manes.11G016300 Manihot esculenta HOM05D001849 ORTHO05D004075 1.1e-32 146.7 781 26.6
AUR62001442 Chenopodium quinoa HOM05D001849 ORTHO05D004075 1.3e-30 139.8 878 24.8
ECA247G2654 Erigeron canadensis HOM05D001849 ORTHO05D004075 5.0e-30 137.9 262 37.0
BcaB03g14988 Brassica carinata HOM05D001849 ORTHO05D004075 6.5e-30 137.5 651 26.3
HanXRQChr04g0094421 Helianthus annuus HOM05D001849 ORTHO05D004075 6.5e-30 137.5 180 45.0
PSO724G0283 Papaver somniferum HOM05D001849 ORTHO05D004075 1.9e-29 136.0 782 26.3
Pp3c3_3510 Physcomitrium patens HOM05D001849 ORTHO05D004075 1.9e-29 136.0 257 33.5
Gohir.A06G143000 Gossypium hirsutum HOM05D001849 ORTHO05D004075 2.5e-29 135.6 869 25.1
Pp3c13_8340 Physcomitrium patens HOM05D001849 ORTHO05D004075 2.1e-28 132.5 257 31.1
AagrBONN_evm.TU.Sc2ySwM_344.4287 Anthoceros agrestis HOM05D001849 ORTHO05D004075 8.0e-28 130.6 182 39.6
MD16G1035300 Malus domestica HOM05D001849 ORTHO05D004075 8.0e-28 130.6 661 23.9
Oeu000390.1 Olea europaea HOM05D001849 ORTHO05D004075 2.0e-26 125.9 1156 22.8
Medtr8g106435 Medicago truncatula HOM05D001849 ORTHO05D004075 2.4e-24 119.0 137 46.7
Manes.06G063600 Manihot esculenta HOM05D001849 ORTHO05D004075 5.3e-24 117.9 794 24.7
Mapoly0055s0059 Marchantia polymorpha HOM05D001849 ORTHO05D004075 2.0e-23 115.9 298 28.5
Lsat_1_v5_gn_1_37801 Lactuca sativa HOM05D001849 ORTHO05D004075 4.5e-23 114.8 255 35.3
CBR_g31688 Chara braunii HOM05D001849 ORTHO05D004075 2.9e-22 112.1 165 33.9
Atru.chr11.323 Acer truncatum HOM05D001849 ORTHO05D004075 4.7e-20 104.8 470 27.2
SHI29648 Sapria himalayana HOM05D001849 ORTHO05D004075 4.8e-17 94.7 84 54.8
CDE07G1198 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 1.1e-16 93.6 144 40.3
vmacro10614 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 4.5e-15 88.2 88 53.4
Dinv37845 Davidia involucrata HOM05D001849 ORTHO05D004075 2.3e-14 85.9 112 42.0
SEGI_32525 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 4.2e-13 81.6 857 20.9
SEGI_18725 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 1.6e-12 79.7 834 22.2
BcaB03g14986 Brassica carinata HOM05D001849 ORTHO05D004075 8.0e-12 77.4 141 38.3
Medtr8g106415 Medicago truncatula HOM05D001849 ORTHO05D004075 4.9e-09 68.2 66 54.5
MCO11G122 Micromonas commoda HOM05D001849 ORTHO05D004075 1.1e-08 67.0 90 35.6
TAR626G0481 Trochodendron aralioides HOM05D001849 ORTHO05D004075 1.6e-07 63.2 402 25.9
Cpa.g.sc25.149 Carica papaya HOM05D020865 ORTHO05D004075 1.0e-06 60.5 125 37.6
Lj6P751T18 Lonicera japonica HOM05D001849 ORTHO05D004075 2.9e-06 58.9 412 23.8
Actinidia32208 Actinidia chinensis HOM05D001849 ORTHO05D004075 6.6e-06 57.8 206 27.2


User provided reference genes

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