Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 2.8e-55 218.4 111 100.0
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.3e-39 166.4 101 84.2
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 2.1e-39 165.6 98 88.8
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 2.8e-39 165.2 101 83.2
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.5e-37 159.5 101 83.2
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 8.4e-36 153.7 95 83.2
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 1.9e-35 152.5 95 82.1
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 1.9e-35 152.5 95 82.1
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 5.1e-33 144.4 88 84.1
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 2.4e-27 125.6 97 70.1
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 5.5e-27 124.4 94 69.1
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 2.7e-26 122.1 99 65.7
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 7.9e-26 120.6 96 68.8
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 1.8e-25 119.4 96 65.6
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 8.7e-25 117.1 92 69.6
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.1e-24 116.7 96 66.7
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.5e-24 116.3 99 63.6
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 5.6e-24 114.4 98 63.3
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 7.4e-24 114.0 99 61.6
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 2.1e-23 112.5 98 62.2
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 2.1e-23 112.5 95 64.2
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 4.8e-23 111.3 107 61.7
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 8.2e-23 110.5 96 64.6
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 5.3e-22 107.8 95 65.3
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 6.9e-22 107.5 99 58.6
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 9.0e-22 107.1 97 60.8
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 4.5e-21 104.8 92 59.8
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 4.5e-21 104.8 92 59.8
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 5.8e-21 104.4 109 53.2
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.0e-20 103.6 107 55.1
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 2.9e-20 102.1 108 56.5
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 2.9e-20 102.1 108 56.5
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 2.9e-20 102.1 106 56.6
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 2.9e-20 102.1 108 57.4
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 4.9e-20 101.3 93 59.1
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 1.1e-19 100.1 106 55.7
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 1.4e-19 99.8 105 54.3
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 1.4e-19 99.8 108 53.7
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 1.4e-19 99.8 108 55.6
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 1.4e-19 99.8 105 55.2
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 2.5e-19 99.0 105 56.2
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 2.5e-19 99.0 108 54.6
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 2.5e-19 99.0 105 56.2
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 5.5e-19 97.8 109 54.1
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 5.5e-19 97.8 109 54.1
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 5.5e-19 97.8 105 54.3
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 5.5e-19 97.8 105 54.3
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 5.5e-19 97.8 104 53.8
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 9.3e-19 97.1 105 54.3
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 1.2e-18 96.7 108 53.7
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.6e-18 96.3 105 53.3
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 1.6e-18 96.3 105 53.3
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 2.1e-18 95.9 108 52.8
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 2.1e-18 95.9 105 54.3
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 2.1e-18 95.9 86 61.6
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 2.7e-18 95.5 105 52.4
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.7e-18 95.5 105 53.3
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 2.7e-18 95.5 103 51.5
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 3.5e-18 95.1 105 52.4
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 4.6e-18 94.7 107 52.3
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 4.6e-18 94.7 105 52.4
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 6.0e-18 94.4 108 53.7
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 6.0e-18 94.4 105 53.3
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 6.0e-18 94.4 103 54.4
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 6.0e-18 94.4 106 53.8
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 7.9e-18 94.0 103 53.4
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 7.9e-18 94.0 109 53.2
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 7.9e-18 94.0 109 53.2
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 7.9e-18 94.0 108 53.7
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 7.9e-18 94.0 108 52.8
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 7.9e-18 94.0 105 53.3
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 1.0e-17 93.6 111 49.5
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.8e-17 92.8 111 46.8
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 1.8e-17 92.8 108 52.8
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 2.3e-17 92.4 111 46.8
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 2.3e-17 92.4 102 52.0
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 3.0e-17 92.0 102 52.9
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 3.0e-17 92.0 103 50.5
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 3.0e-17 92.0 103 52.4
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 3.0e-17 92.0 105 49.5
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 3.9e-17 91.7 106 50.0
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 5.1e-17 91.3 110 51.8
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 5.1e-17 91.3 109 52.3
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 8.7e-17 90.5 108 51.9
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 1.1e-16 90.1 104 49.0
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 1.1e-16 90.1 105 49.5
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 1.9e-16 89.4 105 48.6
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 4.3e-16 88.2 108 51.9
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 9.7e-16 87.0 107 48.6
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 2.2e-15 85.9 107 44.9
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 3.7e-15 85.1 82 54.9
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 5.3e-14 81.3 92 53.3
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 6.9e-14 80.9 106 45.3
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 9.0e-14 80.5 106 50.9
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 9.0e-14 80.5 106 50.0
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 1.5e-13 79.7 99 48.5
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 2.6e-13 79.0 105 48.6
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 2.6e-13 79.0 106 47.2
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 3.4e-13 78.6 105 47.6
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 4.5e-13 78.2 102 49.0
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 1.3e-12 76.6 106 50.0
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 1.7e-12 76.3 102 49.0
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 1.7e-12 76.3 104 42.3
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 2.2e-12 75.9 104 50.0
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 2.9e-12 75.5 103 49.5
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 5.0e-12 74.7 101 46.5
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 8.5e-12 73.9 75 56.0
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 1.4e-11 73.2 99 48.5
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 1.9e-11 72.8 101 45.5
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 3.2e-11 72.0 106 41.5
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 7.2e-11 70.9 106 37.7
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 1.2e-10 70.1 93 46.2
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 1.2e-10 70.1 103 44.7
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 1.6e-10 69.7 103 46.6
CAN.G1086.2 Capsicum annuum HOM05D003813 ORTHO05D004557 1.0e-09 67.0 42 78.6
SalBow3G3353 Salvia bowleyana HOM05D005614 ORTHO05D006759 3.0e-09 65.5 65 55.4
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 1.3e-07 60.1 96 41.7
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 3.7e-07 58.5 99 38.4
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 1.4e-06 56.6 113 29.2
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 3.1e-06 55.5 105 31.4


User provided reference genes

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