Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G943.27 Capsicum annuum HOM05D002338 ORTHO05D006102 7.7e-305 1049.7 527 100.0
PGSC0003DMG400004381 Solanum tuberosum HOM05D002338 ORTHO05D006102 1.3e-240 836.3 527 78.6
Sopen03g002200 Solanum pennellii HOM05D002338 ORTHO05D006102 5.8e-236 820.8 527 77.0
Peaxi162Scf00753g00411 Petunia axillaris HOM05D002338 ORTHO05D006102 3.6e-201 705.3 529 66.7
Dinv32217 Davidia involucrata HOM05D002338 ORTHO05D006102 4.5e-188 661.8 526 62.5
Cc02_g14860 Coffea canephora HOM05D002338 ORTHO05D006102 3.8e-179 632.1 526 59.7
Nitab4.5_0002076g0140 Nicotiana tabacum HOM05D002338 ORTHO05D006102 1.6e-177 626.7 526 62.9
CSS0007657 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 5.7e-175 618.2 531 59.1
Oeu030709.1 Olea europaea HOM05D002338 ORTHO05D006102 2.2e-174 616.3 528 59.1
Nitab4.5_0007975g0050 Nicotiana tabacum HOM05D002338 ORTHO05D006102 3.1e-173 612.5 512 63.5
Hma1.2p1_0987F.1_g244570 Hydrangea macrophylla HOM05D002338 ORTHO05D006102 5.3e-173 611.7 526 57.4
CSS0032914 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 2.0e-172 609.8 531 58.6
Rhsim13G0190300 Rhododendron simsii HOM05D002338 ORTHO05D006102 1.5e-170 603.6 530 58.3
Rhsim09G0087800 Rhododendron simsii HOM05D002338 ORTHO05D006102 2.1e-169 599.7 530 57.9
MSTRG.7403 Avicennia marina HOM05D002338 ORTHO05D006102 1.4e-168 597.0 527 58.4
SGA_v2.0_scaffold1G00039 Striga asiatica HOM05D002338 ORTHO05D006102 1.4e-165 587.0 530 56.2
GSVIVG01021206001 Vitis vinifera HOM05D002338 ORTHO05D006102 4.1e-165 585.5 526 55.1
Lj1P636T28 Lonicera japonica HOM05D002338 ORTHO05D006102 2.7e-164 582.8 533 55.5
SalBow4G0953 Salvia bowleyana HOM05D002338 ORTHO05D006102 8.3e-158 561.2 531 54.2
CSS0015305 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 7.3e-154 548.1 533 54.6
Migut.H00865 Erythranthe guttata HOM05D002338 ORTHO05D006102 9.5e-154 547.7 527 54.1
QL05p046957 Quercus lobata HOM05D002338 ORTHO05D006102 2.1e-153 546.6 535 52.7
ClCG03G007760 Citrullus lanatus HOM05D002338 ORTHO05D006102 6.8e-152 541.6 529 51.8
DCAR_005225 Daucus carota HOM05D002338 ORTHO05D006102 4.4e-151 538.9 530 53.2
MELO3C002646.2 Cucumis melo HOM05D002338 ORTHO05D006102 1.9e-149 533.5 528 50.6
TAR698G0001 Trochodendron aralioides HOM05D002338 ORTHO05D006102 1.9e-149 533.5 534 51.1
CsaV3_1G033380 Cucumis sativus L. HOM05D002338 ORTHO05D006102 5.4e-149 531.9 528 50.6
Manes.06G033800 Manihot esculenta HOM05D002338 ORTHO05D006102 7.0e-149 531.6 526 51.7
GSVIVG01026940001 Vitis vinifera HOM05D002338 ORTHO05D006102 1.6e-148 530.4 533 52.5
Lalb_Chr18g0054471 Lupinus albus HOM05D002338 ORTHO05D006102 2.0e-148 530.0 533 50.3
Ciclev10031207m.g Citrus clementina HOM05D002338 ORTHO05D006102 1.7e-147 526.9 527 50.9
Prupe.4G060500 Prunus persica HOM05D002338 ORTHO05D006102 5.6e-146 521.9 537 49.9
Nn1g04395 Nelumbo nucifera HOM05D002338 ORTHO05D006102 2.8e-145 519.6 529 50.1
Glyma.01G042900 Glycine max HOM05D002338 ORTHO05D006102 3.1e-144 516.2 533 49.9
PGR004G1505 Punica granatum HOM05D002338 ORTHO05D006102 6.8e-144 515.0 527 51.4
Cfa000603 Carpinus fangiana HOM05D002338 ORTHO05D006102 2.6e-143 513.1 536 49.1
CiPaw.10G058500 Carya illinoinensis HOM05D002338 ORTHO05D006102 5.8e-143 511.9 532 50.0
arahy.Tifrunner.gnm1.ann1.2YH6BX Arachis hypogaea HOM05D002338 ORTHO05D006706 1.3e-142 510.8 531 50.5
Solyc03g006177.2 Solanum lycopersicum HOM05D002338 ORTHO05D006102 1.3e-142 510.8 326 77.6
Sed0024643 Sechium edule HOM05D002338 ORTHO05D006102 2.4e-141 506.5 530 48.9
Lj6g0008317 Lotus japonicus HOM05D002338 ORTHO05D006102 4.6e-140 502.3 537 49.5
unitig_736.g22955 Utricularia gibba HOM05D002338 ORTHO05D006102 4.6e-140 502.3 529 49.5
MD05G1301900 Malus domestica HOM05D002338 ORTHO05D006102 6.0e-140 501.9 536 49.6
RcHm_v2.0_Chr5g0010711 Rosa chinensis HOM05D002338 ORTHO05D006102 7.8e-140 501.5 524 51.5
Haze_06238 Corylus avellana HOM05D002338 ORTHO05D006102 1.0e-139 501.1 534 48.7
VMungo1215G0129 Vigna mungo HOM05D002338 ORTHO05D006102 1.5e-138 497.3 529 49.0
Atru.chr2.3891 Acer truncatum HOM05D002338 ORTHO05D006102 9.5e-138 494.6 525 49.9
Phvul.002G066000 Phaseolus vulgaris HOM05D002338 ORTHO05D006102 1.2e-137 494.2 531 48.6
Lsat_1_v5_gn_4_49520 Lactuca sativa HOM05D002338 ORTHO05D006102 1.2e-135 487.6 536 49.4
FvH4_6g24910 Fragaria vesca HOM05D002338 ORTHO05D006102 2.0e-135 486.9 524 50.2
FAN05G5039 Fragaria x ananassa HOM05D002338 ORTHO05D006102 2.0e-135 486.9 526 50.0
FAN14G3958 Fragaria x ananassa HOM05D002338 ORTHO05D006102 7.6e-135 485.0 524 50.0
Sabra04G0055900 Salix brachista HOM05D002338 ORTHO05D006102 9.9e-135 484.6 531 48.0
Duzib138G0048 Durio zibethinus HOM05D002338 ORTHO05D006102 2.2e-134 483.4 521 49.9
AUR62031197 Chenopodium quinoa HOM05D002338 ORTHO05D006102 6.4e-134 481.9 537 46.6
FAN02G0479 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.4e-133 480.7 523 49.7
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 1.4e-133 480.7 529 47.6
CANSAT54G0294 Cannabis sativa HOM05D002338 ORTHO05D006102 2.4e-133 479.9 532 48.1
FAN05G1035 Fragaria x ananassa HOM05D002338 ORTHO05D006102 3.2e-133 479.6 523 49.5
Ca_00873_v3 Cicer arietinum L. HOM05D002338 ORTHO05D006102 5.4e-133 478.8 536 46.8
Potri.004G084700 Populus trichocarpa HOM05D002338 ORTHO05D006102 2.7e-132 476.5 533 48.2
Cpa.g.sc7.51 Carica papaya HOM05D002338 ORTHO05D006102 2.5e-130 469.9 523 47.4
AUR62036936 Chenopodium quinoa HOM05D002338 ORTHO05D006102 4.3e-130 469.2 536 45.9
Medtr2g031410 Medicago truncatula HOM05D002338 ORTHO05D006102 7.3e-130 468.4 533 46.9
AUR62027671 Chenopodium quinoa HOM05D002338 ORTHO05D006102 2.8e-129 466.5 536 45.5
TPR.G22268 Trifolium pratense HOM05D002338 ORTHO05D006102 2.8e-129 466.5 534 45.7
Gorai.007G174700 Gossypium raimondii HOM05D002338 ORTHO05D006102 6.2e-129 465.3 522 49.0
Gohir.D11G163900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 5.2e-128 462.2 522 48.7
Ah.09g233540 Amaranthus hybridus HOM05D002338 ORTHO05D006102 6.8e-128 461.8 553 45.8
HanXRQChr16g0520661 Helianthus annuus HOM05D002338 ORTHO05D006102 1.2e-127 461.1 520 48.8
HanXRQChr16g0518871 Helianthus annuus HOM05D002338 ORTHO05D006102 1.5e-127 460.7 521 48.4
COL.COLO4_08893 Corchorus olitorius HOM05D002338 ORTHO05D006102 5.8e-127 458.8 524 47.7
EL10Ac8g20603 Beta vulgaris HOM05D002338 ORTHO05D006102 9.9e-127 458.0 541 45.1
Oeu017495.1 Olea europaea HOM05D002338 ORTHO05D006102 3.8e-126 456.1 528 48.1
Gohir.A11G156900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 4.2e-125 452.6 519 48.2
THA.LOC104827541 Tarenaya hassleriana HOM05D002338 ORTHO05D006102 5.4e-125 452.2 541 46.8
TWI38G1256 Tripterygium wilfordii HOM05D002338 ORTHO05D006102 5.4e-125 452.2 450 51.6
ECA247G1464 Erigeron canadensis HOM05D002338 ORTHO05D006102 1.6e-124 450.7 525 48.0
SHI24483 Sapria himalayana HOM05D002338 ORTHO05D006102 6.0e-124 448.7 524 46.0
Sp7g33320 Schrenkiella parvula HOM05D002338 ORTHO05D006102 6.6e-123 445.3 528 45.3
AT4G35540 Arabidopsis thaliana HOM05D002338 ORTHO05D006102 1.5e-122 444.1 528 45.1
CSS0032678 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 1.9e-122 443.7 586 44.9
CARHR243880 Cardamine hirsuta HOM05D002338 ORTHO05D006102 3.3e-122 443.0 535 45.2
THA.LOC104826474 Tarenaya hassleriana HOM05D002338 ORTHO05D006102 7.3e-122 441.8 543 45.3
PSO675G9291 Papaver somniferum HOM05D002338 ORTHO05D006102 5.8e-119 432.2 524 44.5
PSO541G5199 Papaver somniferum HOM05D002338 ORTHO05D006102 2.9e-118 429.9 524 44.5
Aa31LG6G12510 Aethionema arabicum HOM05D002338 ORTHO05D006102 4.9e-118 429.1 526 44.7
Aqoxy1G02082 Aquilegia oxysepala HOM05D002338 ORTHO05D006102 2.1e-116 423.7 536 44.4
Thecc.01G169900 Theobroma cacao HOM05D002338 ORTHO05D006102 1.6e-113 414.1 437 50.8
DCAR_030917 Daucus carota HOM05D002338 ORTHO05D006102 6.2e-113 412.1 468 47.0
AL7G15620 Arabidopsis lyrata HOM05D002338 ORTHO05D006102 9.0e-112 408.3 532 42.3
BcaB03g12416 Brassica carinata HOM05D002338 ORTHO05D006102 4.6e-108 396.0 524 42.6
Nn3g21334 Nelumbo nucifera HOM05D002338 ORTHO05D006102 4.6e-108 396.0 417 49.2
A01p03070 Brassica napus HOM05D002338 ORTHO05D006102 1.8e-107 394.0 522 41.6
BraA01t00291Z Brassica rapa HOM05D002338 ORTHO05D006102 9.6e-106 388.3 522 41.2
BcaNung00583 Brassica carinata HOM05D002338 ORTHO05D006102 1.8e-104 384.0 522 41.2
C01p03420 Brassica napus HOM05D002338 ORTHO05D006102 1.8e-104 384.0 522 41.2
BolC1t00329H Brassica oleracea HOM05D002338 ORTHO05D006102 1.8e-104 384.0 522 41.2
Thhalv10027569m.g Eutrema salsugineum HOM05D002338 ORTHO05D006102 9.0e-104 381.7 527 41.0
CDE02G4213 Ceratophyllum demersum HOM05D002338 ORTHO05D006102 7.6e-103 378.6 549 40.1
Glyma.04G157100 Glycine max HOM05D002338 ORTHO05D006102 7.1e-101 372.1 534 41.0
MBI18_g09632_MAGBIO Magnolia biondii HOM05D002338 ORTHO05D006102 7.1e-101 372.1 527 39.8
Lj2A298G34 Lonicera japonica HOM05D002338 ORTHO05D006102 1.5e-95 354.4 480 43.5
Migut.M01042 Erythranthe guttata HOM05D002338 ORTHO05D006102 8.7e-91 338.6 428 46.0
Sc05g0007130 Simmondsia chinensis HOM05D002338 ORTHO05D006102 1.2e-84 318.2 537 36.1
Atru.chr10.1675 Acer truncatum HOM05D002338 ORTHO05D006102 4.1e-80 303.1 299 49.8
SEGI_17381 Sequoiadendron giganteum HOM05D002338 ORTHO05D006102 7.7e-79 298.9 612 31.2
ATR0794G026 Amborella trichopoda HOM05D002338 ORTHO05D006102 6.5e-78 295.8 584 34.4
HanXRQChr16g0517751 Helianthus annuus HOM05D002338 ORTHO05D006102 6.1e-76 289.3 278 53.6
FAN16G2383 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.1e-72 278.5 306 49.3
TAR627G0524 Trochodendron aralioides HOM05D002338 ORTHO05D006102 1.6e-68 264.6 228 55.7
HanXRQChr16g0518151 Helianthus annuus HOM05D002338 ORTHO05D006102 1.4e-67 261.5 322 46.6
Psat1g166240 Pisum sativum HOM05D002338 ORTHO05D006102 1.8e-64 251.1 311 44.4
HPP92_006302 Vanilla planifolia HOM05D002338 ORTHO05D006102 4.1e-64 250.0 413 38.5
Pp3c3_11130 Physcomitrium patens HOM05D002338 ORTHO05D006102 2.7e-60 237.3 553 32.2
Zm00001eb175250 Zea mays HOM05D002338 ORTHO05D006102 2.2e-54 217.6 562 30.4
Mapoly0022s0109 Marchantia polymorpha HOM05D002338 ORTHO05D006102 5.9e-47 193.0 554 28.0
C03p80710 Brassica napus HOM05D002338 ORTHO05D006102 2.2e-41 174.5 295 37.6
Solyc05g023840.1 Solanum lycopersicum HOM05D002338 ORTHO05D006102 4.1e-40 170.2 125 67.2
AagrBONN_evm.TU.Sc2ySwM_228.3636 Anthoceros agrestis HOM05D002338 ORTHO05D006102 1.2e-39 168.7 552 26.4
BcaNung03635 Brassica carinata HOM05D002338 ORTHO05D006102 1.6e-39 168.3 197 42.6
SMO137G0058 Selaginella moellendorffii HOM05D002338 ORTHO05D006102 2.0e-39 167.9 311 33.4
BcaC01g00499 Brassica carinata HOM05D002338 ORTHO05D006102 1.2e-36 158.7 401 30.2
BolC3t20316H Brassica oleracea HOM05D002338 ORTHO05D006102 2.0e-26 124.8 129 52.7
Psat6g197040 Pisum sativum HOM05D002338 ORTHO05D006102 1.7e-25 121.7 205 36.1
BcaNung03637 Brassica carinata HOM05D002338 ORTHO05D006102 1.5e-21 108.6 289 29.4
BcaNung03636 Brassica carinata HOM05D002338 ORTHO05D006102 1.3e-17 95.5 105 43.8
FvH4_3g07850 Fragaria vesca HOM05D009570 ORTHO05D009451 1.9e-16 91.7 88 47.7
Atru.chr10.1674 Acer truncatum HOM05D002338 ORTHO05D006102 2.4e-16 91.3 122 41.0
TAR627G0992 Trochodendron aralioides HOM05D002338 ORTHO05D006102 1.3e-14 85.5 137 35.0
SEGI_36544 Sequoiadendron giganteum HOM05D002338 ORTHO05D006102 1.1e-13 82.4 200 28.5
FAN06G1043 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.9e-13 81.6 96 44.8
Os08g0532500 Oryza sativa ssp. japonica HOM05D002338 ORTHO05D006102 4.3e-13 80.5 241 28.2
MCO04G551 Micromonas commoda HOM05D002338 ORTHO05D006102 2.8e-12 77.8 190 27.9
Sc05g0007150 Simmondsia chinensis HOM05D002338 ORTHO05D006102 2.8e-12 77.8 69 56.5
FAN14G0023 Fragaria x ananassa HOM05D002338 ORTHO05D006102 9.9e-10 69.3 72 52.8
Actinidia16798 Actinidia chinensis HOM05D002338 ORTHO05D006102 1.3e-09 68.9 155 34.2
TPR.G39999 Trifolium pratense HOM05D002338 ORTHO05D006102 2.2e-09 68.2 62 48.4
CBR_g34074 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-08 65.5 81 38.3
FAN05G0862 Fragaria x ananassa HOM05D002338 ORTHO05D006102 2.4e-08 64.7 184 29.9
FAN10G3983 Fragaria x ananassa HOM05D002338 ORTHO05D006102 3.2e-08 64.3 60 48.3
FAN05G0140 Fragaria x ananassa HOM05D002338 ORTHO05D006102 7.1e-08 63.2 184 29.3
Nitab4.5_0001189g0060 Nicotiana tabacum HOM05D002338 ORTHO05D006102 9.3e-08 62.8 43 60.5
ATR0794G076 Amborella trichopoda HOM05D002338 ORTHO05D006102 6.0e-07 60.1 65 46.2
TWI77G0498 Tripterygium wilfordii HOM05D001573 ORTHO05D001660 1.3e-06 58.9 311 23.2
AUR62024476 Chenopodium quinoa HOM05D001573 ORTHO05D001660 2.3e-06 58.2 312 21.2
AUR62026065 Chenopodium quinoa HOM05D001573 ORTHO05D001660 2.3e-06 58.2 312 21.2
ECA248G0012 Erigeron canadensis HOM05D001573 ORTHO05D001660 3.9e-06 57.4 312 23.7
Solyc10g079360.3 Solanum lycopersicum HOM05D001573 ORTHO05D001660 3.9e-06 57.4 296 25.7
PGSC0003DMG401008136 Solanum tuberosum HOM05D001573 ORTHO05D001660 3.9e-06 57.4 296 25.7
Migut.J01739 Erythranthe guttata HOM05D001573 ORTHO05D001660 6.6e-06 56.6 316 22.8
ATR0582G311 Amborella trichopoda HOM05D002338 ORTHO05D006102 8.7e-06 56.2 49 51.0


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