Gene: CiPaw.10G058500

General Information

Structural Information

  • Species Carya illinoinensis
  • Gene Identifier CiPaw.10G058500
  • Transcript Identifier CiPaw.10G058500.1
  • Gene Type Coding gene
  • Location Chr10 : 6636764-6638407 : positive

Gene Family Information

  • ID HOM05D002338
  • #Genes/#Species 290/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id CiPaw.10G058500.v1.1
  • pacid 45830741
  • locus Caril.10G057700

Descriptions

  • Description PTHR11618//PTHR11618:SF23 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0070897
IEA
InterProtranscription preinitiation complex assembly
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G35540
GO:0009846
ISO
PLAZA Integrative Orthologypollen germination AT4G35540

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070063
ISO
PLAZA Integrative OrthologyRNA polymerase binding AT4G35540
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT4G35540
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G35540
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding AT4G35540
GO:0001093
ISO
PLAZA Integrative OrthologyTFIIB-class transcription factor binding AT4G35540

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G35540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000812 Transcription factor TFIIB
IPR036915 Cyclin-like superfamily
Mapman id Description
35.1 not assigned.annotated