Gene: arahy.Tifrunner.gnm1.ann1.2YH6BX

General Information

Structural Information

  • Species Arachis hypogaea
  • Gene Identifier arahy.Tifrunner.gnm1.ann1.2YH6BX
  • Transcript Identifier arahy.Tifrunner.gnm1.ann1.2YH6BX.1
  • Gene Type Coding gene
  • Location arahy.Tifrunner.gnm1.Arahy.12 : 100302554-100315474 : negative

Gene Family Information

  • ID HOM05D002338
  • #Genes/#Species 290/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id arahy.Tifrunner.gnm1.ann1.2YH6BX.v1.0
  • pacid 42599820

Descriptions

  • Description PTHR11618//PTHR11618:SF23 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006807
IEA
InterPronitrogen compound metabolic process
GO:0006596
IEA
InterPropolyamine biosynthetic process
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G35540
GO:0009446
ISO
PLAZA Integrative Orthologyputrescine biosynthetic process AT2G27450
GO:0009846
ISO
PLAZA Integrative Orthologypollen germination AT4G35540

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050126
IEA
InterProN-carbamoylputrescine amidase activity
GO:0070063
ISO
PLAZA Integrative OrthologyRNA polymerase binding AT4G35540
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT4G35540
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G35540
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding AT4G35540
GO:0001093
ISO
PLAZA Integrative OrthologyTFIIB-class transcription factor binding AT4G35540

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G35540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036526 Carbon-nitrogen hydrolase superfamily
IPR036915 Cyclin-like superfamily
IPR003010 Carbon-nitrogen hydrolase
IPR017755 N-carbamoylputrescine amidase
Mapman id Description
8.1.1.3 Polyamine metabolism.putrescine biosynthesis.plastidial/nuclear pathway.N-carbamoylputrescine amidohydrolase