Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G897.10 Capsicum annuum HOM05D006049 ORTHO05D007199 8.0e-79 297.0 145 100.0
CAN.G297.3 Capsicum annuum HOM05D006049 ORTHO05D007199 2.3e-33 146.0 86 80.2
Nitab4.5_0000103g0050 Nicotiana tabacum HOM05D006049 ORTHO05D007199 5.1e-33 144.8 86 80.2
Nitab4.5_0001130g0010 Nicotiana tabacum HOM05D006049 ORTHO05D007199 6.7e-33 144.4 86 79.1
Sopen03g025250 Solanum pennellii HOM05D006049 ORTHO05D007199 6.7e-33 144.4 86 80.2
Solyc03g095250.3 Solanum lycopersicum HOM05D006049 ORTHO05D007199 2.5e-32 142.5 86 79.1
Peaxi162Scf00073g02032 Petunia axillaris HOM05D006049 ORTHO05D007199 6.2e-31 137.9 86 75.6
CAN.G174.3 Capsicum annuum HOM05D006049 ORTHO05D007199 5.5e-27 124.8 86 68.6
Nitab4.5_0000071g0320 Nicotiana tabacum HOM05D006049 ORTHO05D007199 1.6e-26 123.2 86 66.3
Nitab4.5_0005479g0030 Nicotiana tabacum HOM05D006049 ORTHO05D007199 6.0e-26 121.3 86 66.3
Peaxi162Scf00304g00826 Petunia axillaris HOM05D006049 ORTHO05D007199 2.3e-25 119.4 84 67.9
PGSC0003DMG400027591 Solanum tuberosum HOM05D006049 ORTHO05D007199 1.9e-24 116.3 86 64.0
Solyc06g048470.4 Solanum lycopersicum HOM05D006049 ORTHO05D007199 4.3e-24 115.2 86 64.0
Sopen06g014620 Solanum pennellii HOM05D006049 ORTHO05D007199 4.3e-24 115.2 86 64.0
Dinv21874 Davidia involucrata HOM05D006049 ORTHO05D007199 2.5e-19 99.4 86 57.0
Oeu023789.1 Olea europaea HOM05D006049 ORTHO05D007199 1.2e-18 97.1 96 50.0
Oeu001366.1 Olea europaea HOM05D006049 ORTHO05D007199 1.6e-18 96.7 94 50.0
SGA_v2.0_scaffold60G20868 Striga asiatica HOM05D006049 ORTHO05D007199 2.1e-18 96.3 86 52.3
SalBow3G1545 Salvia bowleyana HOM05D006049 ORTHO05D007199 1.0e-17 94.0 86 54.7
vmacro06870 Vaccinium macrocarpon HOM05D006049 ORTHO05D007199 2.3e-17 92.8 84 52.4
CAN.G1305.11 Capsicum annuum HOM05D003283 ORTHO05D004037 3.0e-17 92.4 93 58.1
Nitab4.5_0010552g0010 Nicotiana tabacum HOM05D003283 ORTHO05D004037 3.9e-17 92.0 93 58.1
MSTRG.27246 Avicennia marina HOM05D006049 ORTHO05D007199 8.7e-17 90.9 86 51.2
Cc02_g04990 Coffea canephora HOM05D006049 ORTHO05D007199 8.7e-17 90.9 115 39.1
CSS0012358 Camellia sinensis var. sinensis HOM05D006049 ORTHO05D007199 1.1e-16 90.5 134 40.3
Thecc.10G188200 Theobroma cacao HOM05D006049 ORTHO05D007199 1.9e-16 89.7 98 44.9
Lj1A971T59 Lonicera japonica HOM05D006049 ORTHO05D007199 2.5e-16 89.4 86 50.0
Peaxi162Scf00009g00230 Petunia axillaris HOM05D003283 ORTHO05D004037 5.7e-16 88.2 139 44.6
Actinidia13628 Actinidia chinensis HOM05D006049 ORTHO05D007199 7.4e-16 87.8 86 48.8
Migut.F00558 Erythranthe guttata HOM05D006049 ORTHO05D007199 7.4e-16 87.8 137 38.0
Hma1.2p1_0264F.1_g105720 Hydrangea macrophylla HOM05D006049 ORTHO05D007199 1.3e-15 87.0 86 52.3
Nitab4.5_0000785g0040 Nicotiana tabacum HOM05D003283 ORTHO05D004037 1.3e-15 87.0 92 56.5
Lsat_1_v5_gn_8_10841 Lactuca sativa HOM05D006049 ORTHO05D007199 1.6e-15 86.7 86 47.7
HanXRQChr08g0223291 Helianthus annuus HOM05D006049 ORTHO05D007199 3.7e-15 85.5 132 37.1
Actinidia31646 Actinidia chinensis HOM05D006049 ORTHO05D007199 8.2e-15 84.3 86 47.7
Lsat_1_v5_gn_2_127520 Lactuca sativa HOM05D002347 ORTHO05D002969 8.2e-15 84.3 93 48.4
CSS0039931 Camellia sinensis var. sinensis HOM05D006049 ORTHO05D007199 1.8e-14 83.2 86 51.2
ECA233G0496 Erigeron canadensis HOM05D006049 ORTHO05D007199 1.8e-14 83.2 76 51.3
PGSC0003DMG400018089 Solanum tuberosum HOM05D003283 ORTHO05D004037 4.1e-14 82.0 89 52.8
TAR633G2188 Trochodendron aralioides HOM05D006049 ORTHO05D007199 5.3e-14 81.6 86 50.0
Solyc03g113000.3 Solanum lycopersicum HOM05D003283 ORTHO05D004037 9.0e-14 80.9 89 51.7
Sopen03g032070 Solanum pennellii HOM05D003283 ORTHO05D004037 9.0e-14 80.9 89 51.7
Dinv34516 Davidia involucrata HOM05D002347 ORTHO05D007199 2.6e-13 79.3 79 48.1
HanXRQChr14g0461001 Helianthus annuus HOM05D006049 ORTHO05D007199 1.0e-12 77.4 83 49.4
ECA232G0668 Erigeron canadensis HOM05D006049 ORTHO05D007199 2.9e-12 75.9 86 46.5
Gorai.011G206000 Gossypium raimondii HOM05D006049 ORTHO05D007199 3.8e-12 75.5 88 40.9
MD01G1172700 Malus domestica HOM05D006049 ORTHO05D007199 3.8e-12 75.5 86 46.5
Manes.10G001760 Manihot esculenta HOM05D006049 ORTHO05D007199 3.8e-12 75.5 86 45.3
Glyma.04G225000 Glycine max HOM05D006049 ORTHO05D007199 5.0e-12 75.1 86 40.7
Gohir.A10G177200 Gossypium hirsutum HOM05D006049 ORTHO05D007199 5.0e-12 75.1 88 40.9
QL08p065409 Quercus lobata HOM05D006049 ORTHO05D007199 5.0e-12 75.1 91 42.9
RcHm_v2.0_Chr1g0372921 Rosa chinensis HOM05D006049 ORTHO05D007199 5.0e-12 75.1 115 38.3
DCAR_020159 Daucus carota HOM05D006049 ORTHO05D007199 6.5e-12 74.7 86 45.3
Gohir.D10G183800 Gossypium hirsutum HOM05D006049 ORTHO05D007199 8.5e-12 74.3 88 39.8
Lsat_1_v5_gn_9_60500 Lactuca sativa HOM05D006049 ORTHO05D007199 1.1e-11 73.9 86 44.2
Potri.013G091900 Populus trichocarpa HOM05D006049 ORTHO05D007199 1.1e-11 73.9 86 43.0
Potri.019G064000 Populus trichocarpa HOM05D006049 ORTHO05D007199 1.1e-11 73.9 141 33.3
Sabra19G0077200 Salix brachista HOM05D006049 ORTHO05D007199 1.4e-11 73.6 86 43.0
Sabra19G0079600 Salix brachista HOM05D006049 ORTHO05D007199 1.4e-11 73.6 86 43.0
FvH4_7g26360 Fragaria vesca HOM05D006049 ORTHO05D007199 1.9e-11 73.2 115 37.4
FAN06G4040 Fragaria x ananassa HOM05D006049 ORTHO05D007199 1.9e-11 73.2 115 37.4
FAN01G2405 Fragaria x ananassa HOM05D006049 ORTHO05D007199 3.2e-11 72.4 111 37.8
MD07G1239000 Malus domestica HOM05D006049 ORTHO05D007199 4.2e-11 72.0 141 34.8
Lalb_Chr11g0067581 Lupinus albus HOM05D006049 ORTHO05D007199 5.5e-11 71.6 78 46.2
Duzib114G0134 Durio zibethinus HOM05D006049 ORTHO05D007199 9.4e-11 70.9 88 39.8
CANSAT56G0215 Cannabis sativa HOM05D006049 ORTHO05D007199 1.2e-10 70.5 134 33.6
COL.COLO4_19501 Corchorus olitorius HOM05D006049 ORTHO05D007199 1.6e-10 70.1 89 42.7
ClCG07G005350 Citrullus lanatus HOM05D006049 ORTHO05D007199 3.6e-10 68.9 86 36.0
ECA238G0817 Erigeron canadensis HOM05D000526 ORTHO05D007199 3.6e-10 68.9 86 38.4
Nn5g26751 Nelumbo nucifera HOM05D006049 ORTHO05D007199 3.6e-10 68.9 134 34.3
Prupe.2G267800 Prunus persica HOM05D006049 ORTHO05D007199 3.6e-10 68.9 86 43.0
FAN03G1769 Fragaria x ananassa HOM05D006049 ORTHO05D007199 4.6e-10 68.6 115 35.7
FAN03G2503 Fragaria x ananassa HOM05D006049 ORTHO05D007199 4.6e-10 68.6 115 35.7
FAN03G3258 Fragaria x ananassa HOM05D006049 ORTHO05D007199 4.6e-10 68.6 115 35.7
CiPaw.02G199600 Carya illinoinensis HOM05D006049 ORTHO05D007199 7.9e-10 67.8 131 35.9
unitig_37.g12478 Utricularia gibba HOM05D006049 ORTHO05D007199 1.0e-09 67.4 99 42.4
Sed0014301 Sechium edule HOM05D006049 ORTHO05D007199 1.8e-09 66.6 111 33.3
Sed0023048 Sechium edule HOM05D006049 ORTHO05D007199 2.3e-09 66.2 135 31.9
TWI53G0196 Tripterygium wilfordii HOM05D006049 ORTHO05D007199 3.0e-09 65.9 86 39.5
Atru.chr12.224 Acer truncatum HOM05D006049 ORTHO05D007199 3.9e-09 65.5 86 43.0
Eucgr.G03175 Eucalyptus grandis HOM05D006049 ORTHO05D007199 5.1e-09 65.1 140 30.0
Cfa001175 Carpinus fangiana HOM05D006049 ORTHO05D007199 1.1e-08 63.9 131 34.4
GSVIVG01032875001 Vitis vinifera HOM05D006049 ORTHO05D007199 1.1e-08 63.9 58 48.3
MBI03_g15319_MAGBIO Magnolia biondii HOM05D006049 ORTHO05D007199 1.5e-08 63.5 86 39.5
Gohir.D13G009500 Gossypium hirsutum HOM05D006049 ORTHO05D007199 4.3e-08 62.0 101 33.7
Gorai.013G010200 Gossypium raimondii HOM05D006049 ORTHO05D007199 4.3e-08 62.0 101 33.7
PSO339G0528 Papaver somniferum HOM05D006049 ORTHO05D007199 5.7e-08 61.6 86 40.7
Sc11g0006140 Simmondsia chinensis HOM05D006049 ORTHO05D007199 9.7e-08 60.8 81 39.5
arahy.Tifrunner.gnm1.ann1.TFBQ7Q Arachis hypogaea HOM05D003283 ORTHO05D004037 2.2e-07 59.7 93 41.9
Gohir.A13G008800 Gossypium hirsutum HOM05D006049 ORTHO05D007199 2.2e-07 59.7 101 32.7
PGR031G3628 Punica granatum HOM05D006049 ORTHO05D007199 2.8e-07 59.3 86 36.0
Haze_17386 Corylus avellana HOM05D006049 ORTHO05D007199 6.3e-07 58.2 110 36.4
Ah.12g064770 Amaranthus hybridus HOM05D006049 ORTHO05D007199 1.4e-06 57.0 85 35.3
arahy.Tifrunner.gnm1.ann1.N5P3C8 Arachis hypogaea HOM05D003283 ORTHO05D004037 1.4e-06 57.0 95 40.0
arahy.Tifrunner.gnm1.ann1.Q5PT82 Arachis hypogaea HOM05D003283 ORTHO05D004037 1.4e-06 57.0 95 40.0
COL.COLO4_08427 Corchorus olitorius HOM05D003283 ORTHO05D004037 2.4e-06 56.2 106 38.7
TWI73G0405 Tripterygium wilfordii HOM05D006049 ORTHO05D007199 2.4e-06 56.2 58 46.6
Lalb_Chr19g0125481 Lupinus albus HOM05D003283 ORTHO05D004037 5.3e-06 55.1 94 41.5
Thecc.03G083200 Theobroma cacao HOM05D003283 ORTHO05D004037 6.9e-06 54.7 109 37.6
Ciclev10018904m.g Citrus clementina HOM05D003283 ORTHO05D004037 9.1e-06 54.3 142 34.5


User provided reference genes

Program Settings