Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G860.4 Capsicum annuum HOM05D005778 ORTHO05D007245 0.0e+00 1090.1 596 100.0
Sopen04g022870 Solanum pennellii HOM05D005778 ORTHO05D007245 3.8e-244 848.2 638 76.8
Solyc04g051490.3 Solanum lycopersicum HOM05D005778 ORTHO05D007245 6.8e-241 837.4 638 76.3
Peaxi162Scf00025g03317 Petunia axillaris HOM05D005778 ORTHO05D007245 7.3e-227 790.8 620 72.7
Nitab4.5_0000184g0070 Nicotiana tabacum HOM05D005778 ORTHO05D007245 4.2e-206 721.8 655 65.3
Dinv16426 Davidia involucrata HOM05D005778 ORTHO05D007245 1.7e-151 540.4 715 51.7
Cfa002785 Carpinus fangiana HOM05D005778 ORTHO05D007245 3.8e-151 539.3 596 56.5
Lj4C861G1 Lonicera japonica HOM05D005778 ORTHO05D007245 1.2e-149 534.3 667 52.0
CiPaw.03G131700 Carya illinoinensis HOM05D005778 ORTHO05D007245 2.1e-149 533.5 596 57.4
TAR628G0341 Trochodendron aralioides HOM05D005778 ORTHO05D007245 8.8e-148 528.1 596 55.7
SalBow5G2484 Salvia bowleyana HOM05D005778 ORTHO05D007245 9.7e-147 524.6 624 56.7
Atru.chr4.723 Acer truncatum HOM05D005778 ORTHO05D007245 5.9e-144 515.4 594 53.2
Prupe.6G166800 Prunus persica HOM05D005778 ORTHO05D007245 1.7e-143 513.8 591 51.9
Gorai.011G114700 Gossypium raimondii HOM05D005778 ORTHO05D007245 2.3e-140 503.4 597 53.8
Actinidia31890 Actinidia chinensis HOM05D005778 ORTHO05D007245 5.2e-140 502.3 612 55.6
Gohir.D10G105000 Gossypium hirsutum HOM05D005778 ORTHO05D007245 3.4e-139 499.6 597 55.1
SGA_v2.0_scaffold47G17685 Striga asiatica HOM05D005778 ORTHO05D007245 4.4e-139 499.2 661 52.5
ClCG01G015860 Citrullus lanatus HOM05D005778 ORTHO05D007245 7.5e-139 498.4 594 54.9
CsaV3_6G042140 Cucumis sativus L. HOM05D005778 ORTHO05D007245 2.8e-138 496.5 596 54.0
MD15G1335700 Malus domestica HOM05D005778 ORTHO05D007245 3.7e-138 496.1 513 55.4
Thecc.01G117000 Theobroma cacao HOM05D005778 ORTHO05D007245 6.3e-138 495.4 602 51.5
Nn5g28812 Nelumbo nucifera HOM05D005778 ORTHO05D007245 8.3e-138 495.0 597 55.4
Migut.L00055 Erythranthe guttata HOM05D005778 ORTHO05D007245 4.1e-137 492.7 759 48.1
arahy.Tifrunner.gnm1.ann1.A9RKWD Arachis hypogaea HOM05D005778 ORTHO05D007245 5.3e-137 492.3 590 56.8
Lj4g0013346 Lotus japonicus HOM05D005778 ORTHO05D007245 1.6e-136 490.7 589 55.5
QL06p031408 Quercus lobata HOM05D005778 ORTHO05D007245 2.0e-136 490.3 693 49.4
arahy.Tifrunner.gnm1.ann1.2KBC6S Arachis hypogaea HOM05D005778 ORTHO05D007245 3.8e-135 486.1 588 56.0
DCAR_016672 Daucus carota HOM05D005778 ORTHO05D007245 1.1e-134 484.6 613 50.2
Sed0016319 Sechium edule HOM05D005778 ORTHO05D007245 1.2e-133 481.1 603 51.7
Manes.12G145400 Manihot esculenta HOM05D005778 ORTHO05D007245 1.6e-133 480.7 616 51.0
Prupe.1G550600 Prunus persica HOM05D005778 ORTHO05D007245 1.6e-133 480.7 568 50.9
TWI79G0191 Tripterygium wilfordii HOM05D005778 ORTHO05D007245 8.0e-133 478.4 634 47.6
Ciclev10025290m.g Citrus clementina HOM05D005778 ORTHO05D007245 1.4e-132 477.6 594 52.0
GSVIVG01022267001 Vitis vinifera HOM05D005778 ORTHO05D007245 1.4e-132 477.6 393 65.9
Gohir.A10G082700 Gossypium hirsutum HOM05D005778 ORTHO05D007245 5.7e-131 472.2 500 54.8
Medtr8g092300 Medicago truncatula HOM05D005778 ORTHO05D007245 7.5e-131 471.9 618 52.3
TPR.G2233 Trifolium pratense HOM05D005778 ORTHO05D007245 7.5e-131 471.9 551 56.6
CANSAT01G2349 Cannabis sativa HOM05D005778 ORTHO05D007245 2.2e-130 470.3 659 49.6
PGR119G1966 Punica granatum HOM05D005778 ORTHO05D007245 2.2e-130 470.3 623 51.5
CSS0023800 Camellia sinensis var. sinensis HOM05D005778 ORTHO05D007245 1.4e-129 467.6 390 71.0
Oeu001980.1 Olea europaea HOM05D005778 ORTHO05D007245 1.2e-128 464.5 686 45.5
Ca_17674_v3 Cicer arietinum L. HOM05D005778 ORTHO05D007245 6.6e-127 458.8 642 51.9
Phvul.002G267400 Phaseolus vulgaris HOM05D005778 ORTHO05D007245 1.2e-125 454.5 306 72.2
Rhsim10G0147200 Rhododendron simsii HOM05D005778 ORTHO05D007245 1.2e-125 454.5 305 71.8
Lalb_Chr12g0203421 Lupinus albus HOM05D005778 ORTHO05D007245 1.6e-125 454.1 556 55.9
VMungo0251G2366 Vigna mungo HOM05D005778 ORTHO05D007245 6.1e-125 452.2 683 47.0
THA.LOC104804137 Tarenaya hassleriana HOM05D005778 ORTHO05D007245 8.0e-125 451.8 579 52.8
Potri.007G077400 Populus trichocarpa HOM05D005778 ORTHO05D007245 1.0e-124 451.4 555 53.7
HanXRQChr09g0254171 Helianthus annuus HOM05D005778 ORTHO05D007245 1.4e-124 451.1 652 44.9
Glyma.05G186200 Glycine max HOM05D005778 ORTHO05D007245 4.0e-124 449.5 638 50.2
Cc07_g16660 Coffea canephora HOM05D005778 ORTHO05D007245 4.4e-123 446.0 613 51.1
FvH4_1g23210 Fragaria vesca HOM05D005778 ORTHO05D007245 1.7e-122 444.1 593 47.2
Haze_25082 Corylus avellana HOM05D005778 ORTHO05D007245 8.3e-122 441.8 682 47.7
Psat7g049960 Pisum sativum HOM05D005778 ORTHO05D007245 1.1e-121 441.4 368 70.1
CDE07G0129 Ceratophyllum demersum HOM05D005778 ORTHO05D007245 5.4e-121 439.1 643 44.8
PSO170G4940 Papaver somniferum HOM05D005778 ORTHO05D007245 5.4e-121 439.1 542 54.2
Eucgr.I00295 Eucalyptus grandis HOM05D005778 ORTHO05D007245 2.7e-120 436.8 303 67.3
MD15G1404100 Malus domestica HOM05D005778 ORTHO05D007245 5.9e-120 435.6 496 54.8
FAN19G0143 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.3e-119 434.5 607 46.6
Sabra07G0065400 Salix brachista HOM05D005778 ORTHO05D007245 5.0e-119 432.6 600 50.3
vmacro12878 Vaccinium macrocarpon HOM05D005778 ORTHO05D007245 1.2e-117 427.9 474 56.8
Aqoxy5G02041 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 4.7e-117 426.0 547 50.5
Lsat_1_v5_gn_4_138380 Lactuca sativa HOM05D005778 ORTHO05D007245 3.1e-116 423.3 512 49.2
Sc03g0004580 Simmondsia chinensis HOM05D005778 ORTHO05D007245 4.4e-115 419.5 598 48.8
MSTRG.15762 Avicennia marina HOM05D005778 ORTHO05D007245 7.5e-115 418.7 274 72.3
HPP92_017324 Vanilla planifolia HOM05D005778 ORTHO05D007245 1.4e-113 414.5 623 48.6
Sp4g01220 Schrenkiella parvula HOM05D005778 ORTHO05D007245 1.9e-110 404.1 303 65.7
FAN23G1488 Fragaria x ananassa HOM05D005778 ORTHO05D007245 6.2e-109 399.1 570 45.8
ATR0800G169 Amborella trichopoda HOM05D005778 ORTHO05D007245 6.8e-108 395.6 375 60.3
unitig_37.g12529 Utricularia gibba HOM05D005778 ORTHO05D007245 1.5e-107 394.4 380 58.9
BcaB08g35041 Brassica carinata HOM05D005778 ORTHO05D007245 2.0e-107 394.0 303 64.0
AL4G11490 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 2.6e-107 393.7 575 47.8
AT2G22140 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 3.4e-107 393.3 577 49.9
RcHm_v2.0_Chr2g0117911 Rosa chinensis HOM05D005778 ORTHO05D007245 4.4e-107 392.9 433 53.1
Thhalv10000104m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 5.8e-107 392.5 594 46.6
BcaC07g41093 Brassica carinata HOM05D005778 ORTHO05D007245 2.2e-106 390.6 580 48.1
BolC8t51659H Brassica oleracea HOM05D005778 ORTHO05D007245 2.2e-106 390.6 580 48.1
ECA238G1732 Erigeron canadensis HOM05D005778 ORTHO05D007245 2.2e-106 390.6 634 42.7
Carub.0004s0131 Capsella rubella HOM05D005778 ORTHO05D007245 2.9e-106 390.2 578 47.2
RcHm_v2.0_Chr7g0226611 Rosa chinensis HOM05D005778 ORTHO05D007245 4.9e-106 389.4 595 42.5
Aqoxy4G02517 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 1.1e-105 388.3 540 46.7
Hund19626 Selenicereus undatus HOM05D005778 ORTHO05D007245 1.1e-105 388.3 303 61.7
BolC7t42688H Brassica oleracea HOM05D005778 ORTHO05D007245 1.9e-105 387.5 307 62.5
C08p40960 Brassica napus HOM05D005778 ORTHO05D007245 4.1e-105 386.3 580 47.8
BraA09t41166Z Brassica rapa HOM05D005778 ORTHO05D007245 1.2e-104 384.8 569 49.6
CARHR113310 Cardamine hirsuta HOM05D005778 ORTHO05D007245 1.7e-103 380.9 577 46.6
MELO3C007452.2 Cucumis melo HOM05D005778 ORTHO05D007245 2.3e-103 380.6 640 43.3
Aa31LG7G14570 Aethionema arabicum HOM05D005778 ORTHO05D007245 3.0e-103 380.2 597 44.7
A09p57740 Brassica napus HOM05D005778 ORTHO05D007245 3.9e-103 379.8 568 48.8
Thhalv10000122m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 8.9e-100 368.6 542 48.0
CARHR112840 Cardamine hirsuta HOM05D005778 ORTHO05D007245 1.4e-97 361.3 300 58.3
AT2G21800 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 6.2e-93 345.9 300 56.0
AL4G11110 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 3.1e-92 343.6 544 45.6
BolC4t26687H Brassica oleracea HOM05D005778 ORTHO05D007245 4.0e-92 343.2 398 49.0
Carub.0004s0085 Capsella rubella HOM05D005778 ORTHO05D007245 8.9e-92 342.0 298 55.0
Os04g0648700 Oryza sativa ssp. japonica HOM05D005778 ORTHO05D007245 3.4e-91 340.1 301 56.5
EL10Ac6g15224 Beta vulgaris HOM05D005778 ORTHO05D007245 8.4e-90 335.5 643 40.4
BcaB06g27789 Brassica carinata HOM05D005778 ORTHO05D007245 8.4e-90 335.5 381 51.7
BcaC02g08761 Brassica carinata HOM05D005778 ORTHO05D007245 1.6e-88 331.3 395 47.8
C04p50950 Brassica napus HOM05D005778 ORTHO05D007245 1.6e-88 331.3 395 47.8
Nitab4.5_0021115g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 4.6e-88 329.7 277 75.5
BraA04t17279Z Brassica rapa HOM05D005778 ORTHO05D007245 5.1e-87 326.2 472 46.6
Sp4g00940 Schrenkiella parvula HOM05D005778 ORTHO05D007245 1.1e-86 325.1 608 41.9
A04p16440 Brassica napus HOM05D005778 ORTHO05D007245 2.5e-86 323.9 471 45.9
Hund03512 Selenicereus undatus HOM05D005778 ORTHO05D007245 3.3e-86 323.6 657 37.7
Nitab4.5_0011929g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 1.3e-85 321.6 286 68.5
Zm00001eb068550 Zea mays HOM05D005778 ORTHO05D007245 1.6e-85 321.2 310 51.9
AUR62003644 Chenopodium quinoa HOM05D005778 ORTHO05D007245 9.3e-81 305.4 299 53.5
FAN28G2237 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.5e-75 288.1 506 40.9
FvH4_5g31350 Fragaria vesca HOM05D005778 ORTHO05D007245 3.8e-74 283.5 254 57.9
AagrBONN_evm.TU.Sc2ySwM_228.2963 Anthoceros agrestis HOM05D005778 ORTHO05D007245 9.3e-73 278.9 328 46.0
Pp3c5_3310 Physcomitrium patens HOM05D005778 ORTHO05D007245 1.2e-72 278.5 327 44.6
FAN26G2893 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.5e-67 261.5 571 36.4
Mapoly0041s0060 Marchantia polymorpha HOM05D005778 ORTHO05D007245 5.5e-65 253.1 326 39.6
Cpa.g.sc72.53 Carica papaya HOM05D005778 ORTHO05D007245 2.7e-64 250.8 450 44.2
Glyma.08G144700 Glycine max HOM05D005778 ORTHO05D007245 4.1e-60 236.9 447 37.6
COL.COLO4_03471 Corchorus olitorius HOM05D005778 ORTHO05D007245 2.0e-59 234.6 601 34.8
SMO352G0072 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 4.2e-49 200.3 264 44.7
Cpa.g.sc72.54 Carica papaya HOM05D005778 ORTHO05D007245 3.9e-47 193.7 123 77.2
CBR_g21043 Chara braunii HOM05D005778 ORTHO05D007245 6.9e-44 183.0 381 33.6
SMO288G0013 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 2.1e-32 144.8 282 34.4
PGSC0003DMG400019704 Solanum tuberosum HOM05D005778 ORTHO05D007245 4.0e-31 140.6 75 92.0
SEGI_24036 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 2.0e-27 128.3 106 61.3
SalBow5G4900 Salvia bowleyana HOM05D005778 ORTHO05D007245 4.5e-27 127.1 185 39.5
FAN18G1125 Fragaria x ananassa HOM05D005778 ORTHO05D007245 5.9e-19 100.1 299 31.8
Hma1.2p1_0070F.1_g037570 Hydrangea macrophylla HOM05D005778 ORTHO05D007245 1.2e-16 92.4 62 71.0
MSTRG.15763 Avicennia marina HOM05D005778 ORTHO05D038954 8.0e-16 89.7 363 39.1
SEGI_25471 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 5.7e-14 83.6 62 56.5
Oeu017817.1 Olea europaea HOM05D001353 ORTHO05D002359 2.4e-12 78.2 67 53.7
CARHR113290 Cardamine hirsuta HOM05D005778 ORTHO05D007245 2.7e-11 74.7 60 56.7
Oeu028353.1 Olea europaea HOM05D005778 ORTHO05D007245 9.5e-09 66.2 45 75.6
SMO352G0093 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 4.7e-08 63.9 53 56.6


User provided reference genes

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