Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G824.26 Capsicum annuum HOM05D001201 ORTHO05D015214 5.5e-127 457.6 226 100.0
Solyc09g009080.4 Solanum lycopersicum HOM05D001201 ORTHO05D001100 5.5e-66 255.0 176 73.3
Sopen09g003780 Solanum pennellii HOM05D001201 ORTHO05D001100 4.6e-65 251.9 176 73.3
PGSC0003DMG400002719 Solanum tuberosum HOM05D001201 ORTHO05D001100 1.3e-56 223.8 153 75.2
Nitab4.5_0001922g0010 Nicotiana tabacum HOM05D001201 ORTHO05D001100 3.3e-47 192.6 162 66.7
Peaxi162Scf00433g00067 Petunia axillaris HOM05D001201 ORTHO05D001100 4.2e-42 175.6 177 56.5
Nitab4.5_0006360g0050 Nicotiana tabacum HOM05D001201 ORTHO05D001100 9.1e-29 131.3 126 61.1
Nitab4.5_0005311g0020 Nicotiana tabacum HOM05D001201 ORTHO05D001100 6.1e-25 118.6 198 40.4
Nitab4.5_0000132g0200 Nicotiana tabacum HOM05D001201 ORTHO05D001100 3.5e-20 102.8 173 41.0
CAN.G1138.12 Capsicum annuum HOM05D001201 ORTHO05D001100 9.1e-13 78.2 167 38.3
Sopen10g033100 Solanum pennellii HOM05D001201 ORTHO05D001100 2.2e-11 73.6 162 34.6
Oeu040540.1 Olea europaea HOM05D001201 ORTHO05D001100 3.8e-11 72.8 177 37.3
Peaxi162Scf00110g01921 Petunia axillaris HOM05D001201 ORTHO05D001100 6.5e-11 72.0 176 34.7
Cc06_g05230 Coffea canephora HOM05D001201 ORTHO05D001100 7.2e-10 68.6 144 34.0
Solyc10g083630.2 Solanum lycopersicum HOM05D001201 ORTHO05D001100 9.4e-10 68.2 166 31.3
MSTRG.19228 Avicennia marina HOM05D001201 ORTHO05D001100 5.2e-08 62.4 139 33.1
Oeu032421.3 Olea europaea HOM05D001201 ORTHO05D001100 2.6e-07 60.1 160 31.9
Dinv19826 Davidia involucrata HOM05D001201 ORTHO05D015214 1.7e-06 57.4 155 32.3
Migut.J00987 Erythranthe guttata HOM05D001201 ORTHO05D001100 6.3e-06 55.5 138 31.2


User provided reference genes

Program Settings