Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G799.5 Capsicum annuum HOM05D000329 ORTHO05D002813 2.0e-104 382.5 195 100.0
CAN.G411.91 Capsicum annuum HOM05D000329 ORTHO05D002813 1.0e-60 237.3 134 85.8
CAN.G675.8 Capsicum annuum HOM05D000329 ORTHO05D002813 1.2e-56 223.8 133 84.2
CAN.G588.79 Capsicum annuum HOM05D000329 ORTHO05D002813 3.0e-44 182.6 134 70.9
CAN.G726.18 Capsicum annuum HOM05D000329 ORTHO05D002813 6.6e-44 181.4 117 79.5
PGSC0003DMG400014791 Solanum tuberosum HOM05D000329 ORTHO05D002813 4.0e-41 172.2 117 70.9
Nitab4.5_0000411g0080 Nicotiana tabacum HOM05D000329 ORTHO05D002813 2.6e-40 169.5 131 63.4
Solyc08g076390.3 Solanum lycopersicum HOM05D000329 ORTHO05D002813 1.7e-39 166.8 117 70.1
Nitab4.5_0000834g0020 Nicotiana tabacum HOM05D000329 ORTHO05D002813 4.9e-39 165.2 109 72.5
Sopen08g024970 Solanum pennellii HOM05D000329 ORTHO05D002813 1.4e-38 163.7 117 69.2
Peaxi162Scf00456g00038 Petunia axillaris HOM05D000329 ORTHO05D002813 5.6e-35 151.8 117 64.1
CAN.G742.32 Capsicum annuum HOM05D000329 ORTHO05D002813 3.1e-33 146.0 114 64.9
Nitab4.5_0002778g0080 Nicotiana tabacum HOM05D000329 ORTHO05D002813 3.4e-24 115.9 95 58.9
Nitab4.5_0000556g0190 Nicotiana tabacum HOM05D000329 ORTHO05D002813 1.7e-23 113.6 100 56.0
Solyc08g005240.3 Solanum lycopersicum HOM05D000329 ORTHO05D002813 1.7e-23 113.6 97 60.8
PGSC0003DMG400018506 Solanum tuberosum HOM05D000329 ORTHO05D002813 4.9e-23 112.1 97 58.8
Actinidia14783 Actinidia chinensis HOM05D000329 ORTHO05D002813 2.0e-16 90.1 128 40.6
CSS0031526 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002813 2.2e-15 86.7 85 49.4
CSS0022676 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002813 2.9e-15 86.3 141 41.1
CSS0041150 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002813 3.8e-15 85.9 85 49.4
Oeu017069.1 Olea europaea HOM05D000329 ORTHO05D002813 1.4e-14 84.0 100 42.0
Rhsim11G0020600 Rhododendron simsii HOM05D000329 ORTHO05D002813 1.9e-14 83.6 80 50.0
DCAR_004274 Daucus carota HOM05D000329 ORTHO05D002813 4.2e-14 82.4 97 43.3
DCAR_008228 Daucus carota HOM05D000329 ORTHO05D002813 4.2e-14 82.4 90 44.4
Hma1.2p1_0572F.1_g181280 Hydrangea macrophylla HOM05D000329 ORTHO05D002813 1.2e-13 80.9 75 54.7
Lj8A309G34 Lonicera japonica HOM05D000329 ORTHO05D002813 2.7e-13 79.7 104 45.2
Oeu027081.1 Olea europaea HOM05D000329 ORTHO05D002813 2.7e-13 79.7 100 41.0
Rhsim07G0131400 Rhododendron simsii HOM05D000329 ORTHO05D002813 1.3e-12 77.4 88 43.2
vmacro14195 Vaccinium macrocarpon HOM05D000329 ORTHO05D002813 3.9e-12 75.9 73 47.9
SalBow6G6602 Salvia bowleyana HOM05D000329 ORTHO05D002813 5.1e-12 75.5 73 52.1
Nn3g19402 Nelumbo nucifera HOM05D000329 ORTHO05D002813 6.7e-12 75.1 132 39.4
Dinv28998 Davidia involucrata HOM05D000329 ORTHO05D002813 8.7e-12 74.7 103 42.7
TAR636G1802 Trochodendron aralioides HOM05D000329 ORTHO05D002813 1.1e-11 74.3 75 49.3
Lj2A232T31 Lonicera japonica HOM05D000329 ORTHO05D002813 2.5e-11 73.2 127 40.2
MSTRG.24844 Avicennia marina HOM05D000329 ORTHO05D002813 3.3e-11 72.8 130 36.2
Cc08_g03300 Coffea canephora HOM05D000329 ORTHO05D002813 4.3e-11 72.4 95 41.1
Haze_08140 Corylus avellana HOM05D000329 ORTHO05D002813 5.6e-11 72.0 163 34.4
vmacro00286 Vaccinium macrocarpon HOM05D000329 ORTHO05D002813 1.6e-10 70.5 71 46.5
VMungo1215G1197 Vigna mungo HOM05D000329 ORTHO05D002813 3.7e-10 69.3 77 45.5
QL12p001398 Quercus lobata HOM05D000329 ORTHO05D002813 8.2e-10 68.2 132 34.1
SGA_v2.0_scaffold198G41077 Striga asiatica HOM05D000329 ORTHO05D002813 1.1e-09 67.8 119 36.1
Cpa.g.sc90.3 Carica papaya HOM05D000329 ORTHO05D002813 1.4e-09 67.4 77 49.4
Gohir.D12G209000 Gossypium hirsutum HOM05D000329 ORTHO05D002813 1.4e-09 67.4 75 48.0
FAN08G0451 Fragaria x ananassa HOM05D000329 ORTHO05D002813 1.8e-09 67.0 104 39.4
Gohir.D03G175900 Gossypium hirsutum HOM05D000329 ORTHO05D002813 1.8e-09 67.0 87 41.4
PSO063G1668 Papaver somniferum HOM05D000329 ORTHO05D002813 1.8e-09 67.0 103 37.9
Glyma.01G014700 Glycine max HOM05D000329 ORTHO05D002813 2.4e-09 66.6 77 45.5
Gorai.008G224500 Gossypium raimondii HOM05D000329 ORTHO05D002813 2.4e-09 66.6 90 42.2
Medtr5g029370 Medicago truncatula HOM05D000329 ORTHO05D002813 2.4e-09 66.6 77 46.8
Ca_25182_v3 Cicer arietinum L. HOM05D000329 ORTHO05D002813 3.1e-09 66.2 101 39.6
ECA246G0743 Erigeron canadensis HOM05D000329 ORTHO05D002813 3.1e-09 66.2 103 36.9
Gohir.A03G000035 Gossypium hirsutum HOM05D000329 ORTHO05D002813 3.1e-09 66.2 87 42.5
Gorai.003G185200 Gossypium raimondii HOM05D000329 ORTHO05D002813 3.1e-09 66.2 87 41.4
Phvul.003G283100 Phaseolus vulgaris HOM05D000329 ORTHO05D002813 3.1e-09 66.2 74 48.6
MSTRG.12168 Avicennia marina HOM05D000329 ORTHO05D002813 4.0e-09 65.9 71 46.5
CAN.G137.7 Capsicum annuum HOM05D000329 ORTHO05D002813 4.0e-09 65.9 63 57.1
Ciclev10000262m.g Citrus clementina HOM05D000329 ORTHO05D002813 4.0e-09 65.9 117 36.8
Gohir.A12G206600 Gossypium hirsutum HOM05D000329 ORTHO05D002813 4.0e-09 65.9 75 46.7
HanXRQChr03g0083331 Helianthus annuus HOM05D000329 ORTHO05D002813 4.0e-09 65.9 70 42.9
Phvul.002G137100 Phaseolus vulgaris HOM05D000329 ORTHO05D002813 4.0e-09 65.9 77 42.9
TAR375G0303 Trochodendron aralioides HOM05D000329 ORTHO05D002813 4.0e-09 65.9 71 47.9
Lj2g0019046 Lotus japonicus HOM05D000329 ORTHO05D002813 5.3e-09 65.5 107 39.3
MD16G1280000 Malus domestica HOM05D000329 ORTHO05D002813 5.3e-09 65.5 110 40.0
VMungo0251G2744 Vigna mungo HOM05D000329 ORTHO05D002813 5.3e-09 65.5 77 46.8
GSVIVG01013083001 Vitis vinifera HOM05D000329 ORTHO05D002813 5.3e-09 65.5 110 36.4
FAN13G1113 Fragaria x ananassa HOM05D000329 ORTHO05D002813 6.9e-09 65.1 104 38.5
Duzib068G0601 Durio zibethinus HOM05D000329 ORTHO05D002813 1.2e-08 64.3 75 44.0
Glyma.09G207400 Glycine max HOM05D000329 ORTHO05D002813 1.2e-08 64.3 73 45.2
CiPaw.11G097900 Carya illinoinensis HOM05D000329 ORTHO05D002813 1.5e-08 63.9 94 42.6
FAN04G0697 Fragaria x ananassa HOM05D000329 ORTHO05D002813 1.5e-08 63.9 104 37.5
Sopen08g001270 Solanum pennellii HOM05D000329 ORTHO05D002813 1.5e-08 63.9 94 44.7
TPR.G19433 Trifolium pratense HOM05D000329 ORTHO05D002813 1.5e-08 63.9 77 45.5
TAR629G2742 Trochodendron aralioides HOM05D000329 ORTHO05D002813 1.5e-08 63.9 71 46.5
Atru.chr6.1514 Acer truncatum HOM05D000329 ORTHO05D002813 2.6e-08 63.2 86 41.9
CAN.G186.18 Capsicum annuum HOM05D000912 ORTHO05D001232 3.4e-08 62.8 43 62.8
Psat2g138680 Pisum sativum HOM05D000329 ORTHO05D002813 3.4e-08 62.8 93 41.9
HanXRQChr13g0415761 Helianthus annuus HOM05D000329 ORTHO05D002813 4.5e-08 62.4 124 31.5
Sed0016819 Sechium edule HOM05D000329 ORTHO05D002813 4.5e-08 62.4 74 43.2
Manes.17G009900 Manihot esculenta HOM05D000329 ORTHO05D002813 7.6e-08 61.6 81 39.5
FAN18G0640 Fragaria x ananassa HOM05D000329 ORTHO05D002813 1.3e-07 60.8 107 36.4
FAN18G1461 Fragaria x ananassa HOM05D000329 ORTHO05D002813 1.3e-07 60.8 107 36.4
Gohir.D08G175000 Gossypium hirsutum HOM05D000329 ORTHO05D002813 1.3e-07 60.8 102 36.3
Gorai.004G182600 Gossypium raimondii HOM05D000329 ORTHO05D002813 1.3e-07 60.8 102 36.3
PSO782G4222 Papaver somniferum HOM05D000329 ORTHO05D002813 1.3e-07 60.8 110 36.4
Prupe.5G028800 Prunus persica HOM05D000329 ORTHO05D002813 1.7e-07 60.5 76 40.8
Gohir.A08G154100 Gossypium hirsutum HOM05D000329 ORTHO05D002813 2.2e-07 60.1 102 36.3
TWI81G0430 Tripterygium wilfordii HOM05D000329 ORTHO05D002813 2.2e-07 60.1 82 40.2
ClCG09G011670 Citrullus lanatus HOM05D000329 ORTHO05D002813 2.9e-07 59.7 83 38.6
FvH4_5g22980 Fragaria vesca HOM05D000329 ORTHO05D002813 2.9e-07 59.7 107 36.4
Migut.E00750 Erythranthe guttata HOM05D000329 ORTHO05D002813 3.8e-07 59.3 115 31.3
ClCG10G001330 Citrullus lanatus HOM05D000329 ORTHO05D002813 4.9e-07 58.9 75 42.7
ECA240G2154 Erigeron canadensis HOM05D000329 ORTHO05D002813 4.9e-07 58.9 68 41.2
HanXRQChr17g0538141 Helianthus annuus HOM05D000329 ORTHO05D002813 4.9e-07 58.9 70 41.4
Lsat_1_v5_gn_6_81220 Lactuca sativa HOM05D000329 ORTHO05D002813 4.9e-07 58.9 71 42.3
Thecc.03G309300 Theobroma cacao HOM05D000329 ORTHO05D002813 4.9e-07 58.9 118 31.4
TWI60G0333 Tripterygium wilfordii HOM05D000329 ORTHO05D002813 4.9e-07 58.9 119 32.8
Aqoxy3G02191 Aquilegia oxysepala HOM05D000329 ORTHO05D002813 6.5e-07 58.5 80 36.2
AUR62018646 Chenopodium quinoa HOM05D000329 ORTHO05D002813 6.5e-07 58.5 106 38.7
CDE03G0389 Ceratophyllum demersum HOM05D000329 ORTHO05D002813 8.4e-07 58.2 65 43.1
Duzib084G1263 Durio zibethinus HOM05D000329 ORTHO05D002813 8.4e-07 58.2 92 35.9
Duzib205G0915 Durio zibethinus HOM05D000329 ORTHO05D002813 8.4e-07 58.2 76 42.1
Sed0024692 Sechium edule HOM05D000329 ORTHO05D002813 1.4e-06 57.4 76 39.5
RcHm_v2.0_Chr7g0211721 Rosa chinensis HOM05D000329 ORTHO05D002813 1.9e-06 57.0 76 42.1
unitig_32.g10898 Utricularia gibba HOM05D000329 ORTHO05D002813 1.9e-06 57.0 85 35.3
arahy.Tifrunner.gnm1.ann1.NP34ZW Arachis hypogaea HOM05D000329 ORTHO05D002813 2.5e-06 56.6 91 41.8
arahy.Tifrunner.gnm1.ann1.NS6D80 Arachis hypogaea HOM05D000329 ORTHO05D002813 2.5e-06 56.6 91 41.8
AUR62007348 Chenopodium quinoa HOM05D000329 ORTHO05D002813 2.5e-06 56.6 72 43.1
COL.COLO4_16953 Corchorus olitorius HOM05D000329 ORTHO05D002813 2.5e-06 56.6 75 41.3
MELO3C003435.2 Cucumis melo HOM05D000329 ORTHO05D002813 2.5e-06 56.6 99 36.4
Sc01g0007190 Simmondsia chinensis HOM05D000329 ORTHO05D002813 2.5e-06 56.6 81 40.7
DCAR_018695 Daucus carota HOM05D000329 ORTHO05D002813 3.2e-06 56.2 72 40.3
MD06G1026100 Malus domestica HOM05D000329 ORTHO05D002813 4.2e-06 55.8 98 35.7
Lsat_1_v5_gn_3_19221 Lactuca sativa HOM05D000329 ORTHO05D002813 5.5e-06 55.5 72 34.7
Nn1g00196 Nelumbo nucifera HOM05D000329 ORTHO05D002813 5.5e-06 55.5 75 40.0
Sabra03G0064900 Salix brachista HOM05D000329 ORTHO05D002813 5.5e-06 55.5 78 38.5
CiPaw.12G067700 Carya illinoinensis HOM05D000329 ORTHO05D002813 7.1e-06 55.1 77 40.3
Lalb_Chr05g0215811 Lupinus albus HOM05D000329 ORTHO05D002813 7.1e-06 55.1 75 46.7
Sabra01G0106300 Salix brachista HOM05D000329 ORTHO05D002813 7.1e-06 55.1 83 38.6
Lalb_Chr16g0381121 Lupinus albus HOM05D000329 ORTHO05D002813 9.3e-06 54.7 75 45.3
Potri.003G096100 Populus trichocarpa HOM05D000329 ORTHO05D002813 9.3e-06 54.7 78 38.5


User provided reference genes

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