Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G694.33 Capsicum annuum HOM05D006172 ORTHO05D005515 1.4e-184 649.4 328 100.0
CAN.G694.35 Capsicum annuum HOM05D006172 ORTHO05D005515 2.2e-172 609.0 326 95.4
Solyc05g055610.4 Solanum lycopersicum HOM05D006172 ORTHO05D005515 3.5e-138 495.4 345 75.7
Peaxi162Scf00627g00035 Petunia axillaris HOM05D006172 ORTHO05D005515 2.9e-137 492.3 341 75.1
Sopen05g034060 Solanum pennellii HOM05D006172 ORTHO05D005515 1.5e-136 490.0 345 75.4
Nitab4.5_0006322g0020 Nicotiana tabacum HOM05D006172 ORTHO05D005515 1.9e-136 489.6 349 73.1
Nitab4.5_0000096g0040 Nicotiana tabacum HOM05D006172 ORTHO05D005515 3.4e-133 478.8 352 72.7
Cc09_g01690 Coffea canephora HOM05D006172 ORTHO05D005515 4.0e-102 375.6 362 58.0
CSS0050420 Camellia sinensis var. sinensis HOM05D006172 ORTHO05D005515 7.1e-99 364.8 342 58.8
Oeu013636.1 Olea europaea HOM05D006172 ORTHO05D005515 1.2e-98 364.0 353 58.6
Oeu013635.1 Olea europaea HOM05D006172 ORTHO05D005515 2.1e-98 363.2 353 58.6
CSS0038964 Camellia sinensis var. sinensis HOM05D006172 ORTHO05D005515 3.5e-98 362.5 342 58.8
Lj1A1230T62 Lonicera japonica HOM05D006172 ORTHO05D005515 4.6e-98 362.1 351 58.7
Migut.M01317 Erythranthe guttata HOM05D006172 ORTHO05D005515 6.2e-95 351.7 346 55.5
Psat4g006680 Pisum sativum HOM05D006172 ORTHO05D005515 5.8e-93 345.1 344 55.8
vmacro03686 Vaccinium macrocarpon HOM05D006172 ORTHO05D005515 1.3e-92 344.0 342 56.7
Medtr4g132120 Medicago truncatula HOM05D006172 ORTHO05D005515 1.4e-91 340.5 348 54.9
SGA_v2.0_scaffold4G01916 Striga asiatica HOM05D006172 ORTHO05D005515 1.2e-90 337.4 345 55.7
Potri.004G015200 Populus trichocarpa HOM05D006172 ORTHO05D005515 2.1e-90 336.7 357 54.6
COL.COLO4_31773 Corchorus olitorius HOM05D006172 ORTHO05D005515 1.5e-88 330.5 355 55.2
HanXRQChr05g0129541 Helianthus annuus HOM05D006172 ORTHO05D005515 1.5e-88 330.5 344 55.2
HanXRQChr05g0129551 Helianthus annuus HOM05D006172 ORTHO05D005515 1.5e-88 330.5 344 55.2
ECA236G0092 Erigeron canadensis HOM05D006172 ORTHO05D005515 5.6e-88 328.6 341 55.4
Ca_21083_v3 Cicer arietinum L. HOM05D006172 ORTHO05D005515 7.4e-88 328.2 337 54.3
arahy.Tifrunner.gnm1.ann1.3R4FRS Arachis hypogaea HOM05D006172 ORTHO05D005515 9.6e-88 327.8 341 54.5
AUR62021945 Chenopodium quinoa HOM05D006172 ORTHO05D005515 9.6e-88 327.8 343 55.7
Rhsim13G0154200 Rhododendron simsii HOM05D006172 ORTHO05D005515 9.6e-88 327.8 344 54.9
Lsat_1_v5_gn_7_15980 Lactuca sativa HOM05D006172 ORTHO05D005515 1.3e-87 327.4 344 54.4
Sc05g0009930 Simmondsia chinensis HOM05D006172 ORTHO05D005515 1.3e-87 327.4 341 54.8
arahy.Tifrunner.gnm1.ann1.GS5NL2 Arachis hypogaea HOM05D006172 ORTHO05D005515 2.1e-87 326.6 341 54.3
Duzib192G0085 Durio zibethinus HOM05D006172 ORTHO05D005515 2.1e-87 326.6 339 54.9
THA.LOC104813121 Tarenaya hassleriana HOM05D006172 ORTHO05D005515 4.8e-87 325.5 347 53.6
Sabra04G0007400 Salix brachista HOM05D006172 ORTHO05D005515 6.2e-87 325.1 361 52.6
Aqoxy1G02151 Aquilegia oxysepala HOM05D006172 ORTHO05D005515 8.1e-87 324.7 355 53.0
CANSAT56G2229 Cannabis sativa HOM05D006172 ORTHO05D005515 1.1e-86 324.3 341 53.4
DCAR_028182 Daucus carota HOM05D006172 ORTHO05D005515 1.4e-86 323.9 340 55.0
Lj4g0023330 Lotus japonicus HOM05D006172 ORTHO05D005515 1.4e-86 323.9 343 52.5
Hund21409 Selenicereus undatus HOM05D006172 ORTHO05D005515 2.4e-86 323.2 341 54.3
PGR042G0524 Punica granatum HOM05D006172 ORTHO05D005515 3.1e-86 322.8 337 55.2
Sc05g0009220 Simmondsia chinensis HOM05D006172 ORTHO05D005515 6.9e-86 321.6 341 55.4
EL10Ac8g20057 Beta vulgaris HOM05D006172 ORTHO05D005515 1.5e-85 320.5 344 54.9
Ah.09g234910 Amaranthus hybridus HOM05D006172 ORTHO05D005515 9.9e-85 317.8 336 53.6
MELO3C007389.2 Cucumis melo HOM05D006172 ORTHO05D005515 1.3e-84 317.4 336 53.6
ClCG01G022000 Citrullus lanatus HOM05D006172 ORTHO05D005515 1.7e-84 317.0 336 53.0
TAR626G1786 Trochodendron aralioides HOM05D006172 ORTHO05D005515 1.7e-84 317.0 349 52.4
Gorai.009G178500 Gossypium raimondii HOM05D006172 ORTHO05D005515 3.8e-84 315.8 340 53.2
BraA03t12201Z Brassica rapa HOM05D006172 ORTHO05D005515 4.9e-84 315.5 347 53.0
Gohir.A05G170200 Gossypium hirsutum HOM05D006172 ORTHO05D005515 4.9e-84 315.5 345 53.6
Thhalv10028391m.g Eutrema salsugineum HOM05D006172 ORTHO05D005515 6.4e-84 315.1 345 51.9
Sed0002789 Sechium edule HOM05D006172 ORTHO05D005515 6.4e-84 315.1 342 52.6
GSVIVG01012726001 Vitis vinifera HOM05D006172 ORTHO05D005515 6.4e-84 315.1 344 52.3
Carub.0006s3250 Capsella rubella HOM05D006172 ORTHO05D005515 1.9e-83 313.5 345 51.0
Glyma.07G260400 Glycine max HOM05D006172 ORTHO05D005515 1.9e-83 313.5 344 51.2
Gohir.D05G173300 Gossypium hirsutum HOM05D006172 ORTHO05D005515 1.9e-83 313.5 340 52.9
Sp6g04230 Schrenkiella parvula HOM05D006172 ORTHO05D005515 7.1e-83 311.6 347 50.7
AL6G48130 Arabidopsis lyrata HOM05D006172 ORTHO05D005515 1.2e-82 310.8 345 51.3
AT4G04670 Arabidopsis thaliana HOM05D006172 ORTHO05D005515 1.6e-82 310.5 343 51.9
A03p30170 Brassica napus HOM05D006172 ORTHO05D005515 1.6e-82 310.5 342 52.3
Haze_06799 Corylus avellana HOM05D006172 ORTHO05D005515 4.6e-82 308.9 333 52.0
Atru.chr10.2219 Acer truncatum HOM05D006172 ORTHO05D005515 6.0e-82 308.5 329 50.5
PSO675G8381 Papaver somniferum HOM05D006172 ORTHO05D005515 6.0e-82 308.5 343 50.1
BolC3t15953H Brassica oleracea HOM05D006172 ORTHO05D005515 3.0e-81 306.2 350 50.9
Aa31LG9G9740 Aethionema arabicum HOM05D006172 ORTHO05D005515 8.7e-81 304.7 343 51.6
VMungo1215G3219 Vigna mungo HOM05D006172 ORTHO05D005515 8.7e-81 304.7 343 51.6
Nn1g07129 Nelumbo nucifera HOM05D006172 ORTHO05D005515 1.1e-80 304.3 360 49.4
BcaB01g02576 Brassica carinata HOM05D006172 ORTHO05D005515 1.5e-80 303.9 341 50.1
MD10G1321300 Malus domestica HOM05D006172 ORTHO05D005515 2.1e-79 300.1 343 50.4
Lalb_Chr13g0304211 Lupinus albus HOM05D006172 ORTHO05D005515 2.8e-79 299.7 346 50.6
C03p36400 Brassica napus HOM05D006172 ORTHO05D005515 3.7e-79 299.3 346 50.3
TWI38G1682 Tripterygium wilfordii HOM05D006172 ORTHO05D005515 3.7e-79 299.3 342 51.8
Cpa.g.sc152.15 Carica papaya HOM05D006172 ORTHO05D005515 4.8e-79 298.9 345 49.3
FvH4_3g02080 Fragaria vesca HOM05D006172 ORTHO05D005515 8.1e-79 298.1 341 51.0
Ciclev10018338m.g Citrus clementina HOM05D006172 ORTHO05D005515 1.8e-78 297.0 334 48.2
RcHm_v2.0_Chr5g0003171 Rosa chinensis HOM05D006172 ORTHO05D005515 3.1e-78 296.2 338 51.5
AUR62012709 Chenopodium quinoa HOM05D006172 ORTHO05D005515 5.3e-78 295.4 328 53.0
FAN21G3941 Fragaria x ananassa HOM05D006172 ORTHO05D005515 6.9e-78 295.0 336 51.5
Eucgr.E04055 Eucalyptus grandis HOM05D006172 ORTHO05D005515 2.5e-75 286.6 346 48.8
FAN25G0496 Fragaria x ananassa HOM05D006172 ORTHO05D005515 7.1e-75 285.0 341 50.4
QL05p073195 Quercus lobata HOM05D006172 ORTHO05D005515 1.2e-74 284.3 331 50.5
Actinidia28669 Actinidia chinensis HOM05D006172 ORTHO05D005515 5.9e-69 265.4 259 57.9
ATR0794G123 Amborella trichopoda HOM05D006172 ORTHO05D005515 2.2e-68 263.5 383 43.6
CDE11G0148 Ceratophyllum demersum HOM05D006172 ORTHO05D005515 4.2e-67 259.2 352 45.2
CARHR252880 Cardamine hirsuta HOM05D006172 ORTHO05D005515 1.8e-62 243.8 243 56.0
Atru.chr10.2224 Acer truncatum HOM05D006172 ORTHO05D005515 1.1e-59 234.6 216 56.5
SMO139G0125 Selaginella moellendorffii HOM05D006172 ORTHO05D005515 1.6e-58 230.7 388 39.2
SEGI_01208 Sequoiadendron giganteum HOM05D006172 ORTHO05D005515 1.0e-57 228.0 422 36.0
SHI02199 Sapria himalayana HOM05D006172 ORTHO05D005515 7.4e-56 221.9 222 55.0
Mapoly0137s0034 Marchantia polymorpha HOM05D006172 ORTHO05D005515 1.3e-55 221.1 398 36.2
AagrBONN_evm.TU.Sc2ySwM_362.1355 Anthoceros agrestis HOM05D006172 ORTHO05D005515 6.3e-47 192.2 273 42.9
Pp3c9_15020 Physcomitrium patens HOM05D006172 ORTHO05D005515 1.2e-42 177.9 451 30.4
CBR_g49836 Chara braunii HOM05D006172 ORTHO05D004693 4.8e-39 166.0 211 41.7
HPP92_012400 Vanilla planifolia HOM05D006172 ORTHO05D005515 8.5e-36 155.2 212 46.2
QL03p014007 Quercus lobata HOM05D001565 ORTHO05D005515 1.1e-35 154.8 209 45.5
MCO05G475 Micromonas commoda HOM05D006172 ORTHO05D005515 2.0e-29 134.0 202 37.1
Cre14.g626634 Chlamydomonas reinhardtii HOM05D006172 ORTHO05D005515 1.0e-28 131.7 194 37.6
PRCOL_00000475 Prasinoderma coloniale HOM05D006172 ORTHO05D005515 1.0e-28 131.7 186 37.6
HPP92_012316 Vanilla planifolia HOM05D006172 ORTHO05D005515 1.3e-28 131.3 207 43.0
Zm00001eb322630 Zea mays HOM05D006172 ORTHO05D005515 6.8e-25 119.0 229 39.7
unitig_37.g12155 Utricularia gibba HOM05D006172 ORTHO05D005515 2.6e-24 117.1 93 60.2
unitig_37.g12154 Utricularia gibba HOM05D006172 ORTHO05D005515 5.9e-21 105.9 112 52.7
Thecc.06G220200 Theobroma cacao HOM05D006172 ORTHO05D005515 5.2e-17 92.8 85 54.1
SHI02198 Sapria himalayana HOM05D006172 ORTHO05D005515 6.8e-17 92.4 84 52.4
Dinv13892 Davidia involucrata HOM05D006172 ORTHO05D005515 2.0e-16 90.9 68 64.7
MBI02_g21856_MAGBIO Magnolia biondii HOM05D006172 ORTHO05D005515 7.5e-16 89.0 225 31.1
Manes.16G007200 Manihot esculenta HOM05D006172 ORTHO05D005515 7.5e-16 89.0 68 60.3
PSO541G4594 Papaver somniferum HOM05D006172 ORTHO05D005515 9.8e-16 88.6 99 41.4
MBI02_g46431_MAGBIO Magnolia biondii HOM05D006172 ORTHO05D005515 1.8e-14 84.3 82 47.6
CiPaw.09G091900 Carya illinoinensis HOM05D006172 ORTHO05D005515 2.4e-14 84.0 68 58.8
PGSC0003DMG400023367 Solanum tuberosum HOM05D006172 ORTHO05D005515 2.4e-14 84.0 45 82.2
CARHR252870 Cardamine hirsuta HOM05D006172 ORTHO05D005515 4.1e-14 83.2 72 50.0
HPP92_012401 Vanilla planifolia HOM05D006172 ORTHO05D005515 1.2e-13 81.6 73 52.1
unitig_37.g12153 Utricularia gibba HOM05D006172 ORTHO05D005515 4.6e-13 79.7 63 54.0
Prupe.4G021000 Prunus persica HOM05D006172 ORTHO05D005515 5.0e-12 76.3 68 54.4
Cfa027274 Carpinus fangiana HOM05D006172 ORTHO05D005515 1.1e-11 75.1 253 30.0


User provided reference genes

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